RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.54■■□□□ 1.36
CCDC7-203ENST00000362006 PLCH1Q4KWH8 1693 aa23.54■■□□□ 1.36
CCDC7-203ENST00000362006 MYH16Q9H6N6 1097 aa23.54■■□□□ 1.36
CCDC7-203ENST00000362006 NWD2Q9ULI1 1742 aa23.54■■□□□ 1.36
CCDC7-203ENST00000362006 RTF1Q92541 710 aaKnown RBP23.53■■□□□ 1.36
CCDC7-203ENST00000362006 DUSP27Q5VZP5 1158 aa23.53■■□□□ 1.36
CCDC7-203ENST00000362006 LARP1Q6PKG0 1096 aaKnown RBP23.53■■□□□ 1.36
CCDC7-203ENST00000362006 GNAT3A8MTJ3 354 aa23.52■■□□□ 1.36
CCDC7-203ENST00000362006 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
CCDC7-203ENST00000362006 MAP3K5Q99683 1374 aa23.51■■□□□ 1.35
CCDC7-203ENST00000362006 SLIT2O94813 1529 aa23.5■■□□□ 1.35
CCDC7-203ENST00000362006 SPINK5Q9NQ38 1064 aaPredicted RBP23.5■■□□□ 1.35
CCDC7-203ENST00000362006 PARP4Q9UKK3 1724 aaKnown RBP23.49■■□□□ 1.35
CCDC7-203ENST00000362006 AKAP4Q5JQC9 854 aa23.49■■□□□ 1.35
CCDC7-203ENST00000362006 ZNF530Q6P9A1 599 aaPredicted RBP23.48■■□□□ 1.35
CCDC7-203ENST00000362006 NRAPQ86VF7 1730 aa23.48■■□□□ 1.35
CCDC7-203ENST00000362006 GNAI1P63096 354 aa23.48■■□□□ 1.35
CCDC7-203ENST00000362006 C1orf141Q5JVX7 400 aa23.47■■□□□ 1.35
CCDC7-203ENST00000362006 IFT57Q9NWB7 429 aa23.47■■□□□ 1.35
CCDC7-203ENST00000362006 MEGF6O75095 1541 aa23.47■■□□□ 1.35
CCDC7-203ENST00000362006 IL2RBP14784 551 aa23.47■■□□□ 1.35
CCDC7-203ENST00000362006 OVOS2A0A0G2JMS6 1433 aa23.46■■□□□ 1.35
CCDC7-203ENST00000362006 NGLY1Q96IV0 654 aa23.46■■□□□ 1.35
CCDC7-203ENST00000362006 PKD1L3Q7Z443 1732 aa23.46■■□□□ 1.35
CCDC7-203ENST00000362006 CFAP44Q96MT7 982 aa23.45■■□□□ 1.34
CCDC7-203ENST00000362006 MCM10Q7L590 875 aa23.44■■□□□ 1.34
CCDC7-203ENST00000362006 DCTN1Q14203 1278 aa23.44■■□□□ 1.34
CCDC7-203ENST00000362006 THUMPD2Q9BTF0 503 aaKnown RBP23.44■■□□□ 1.34
CCDC7-203ENST00000362006 THRAP3Q9Y2W1 955 aaKnown RBP23.44■■□□□ 1.34
CCDC7-203ENST00000362006 LRP6O75581 1613 aa23.43■■□□□ 1.34
CCDC7-203ENST00000362006 ZNF853P0CG23 659 aa23.43■■□□□ 1.34
CCDC7-203ENST00000362006 UNC5CLQ8IV45 518 aa23.43■■□□□ 1.34
CCDC7-203ENST00000362006 FNBP4Q8N3X1 1017 aaPredicted RBP23.43■■□□□ 1.34
CCDC7-203ENST00000362006 C8orf37Q96NL8 207 aa23.43■■□□□ 1.34
CCDC7-203ENST00000362006 IFNL2Q8IZJ0 200 aa23.42■■□□□ 1.34
CCDC7-203ENST00000362006 CDCA7Q9BWT1 371 aaPredicted RBP23.42■■□□□ 1.34
CCDC7-203ENST00000362006 MEX3CQ5U5Q3 659 aaKnown RBP23.41■■□□□ 1.34
CCDC7-203ENST00000362006 ZCRB1Q8TBF4 217 aaKnown RBP23.41■■□□□ 1.34
CCDC7-203ENST00000362006 FANCIQ9NVI1 1328 aa23.41■■□□□ 1.34
CCDC7-203ENST00000362006 IL17REQ8NFR9 667 aa23.41■■□□□ 1.34
CCDC7-203ENST00000362006 RCAN3Q9UKA8 241 aa23.41■■□□□ 1.34
CCDC7-203ENST00000362006 LRRC37A3O60309 1634 aa23.4■■□□□ 1.34
CCDC7-203ENST00000362006 HSP90AB1P08238 724 aaKnown RBP23.4■■□□□ 1.34
CCDC7-203ENST00000362006 CT47B1P0C2W7 299 aaPredicted RBP23.4■■□□□ 1.34
CCDC7-203ENST00000362006 BABAM1Q9NWV8 329 aa23.4■■□□□ 1.34
CCDC7-203ENST00000362006 LAS1LQ9Y4W2 734 aaKnown RBP23.4■■□□□ 1.34
CCDC7-203ENST00000362006 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
CCDC7-203ENST00000362006 SPATA31A1Q5TZJ5 1347 aa23.39■■□□□ 1.34
CCDC7-203ENST00000362006 USP35Q9P2H5 1018 aa23.39■■□□□ 1.34
CCDC7-203ENST00000362006 PCDH11XQ9BZA7 1347 aa23.39■■□□□ 1.33
CCDC7-203ENST00000362006 PCDH11YQ9BZA8 1340 aa23.39■■□□□ 1.33
CCDC7-203ENST00000362006 PHKG2P15735 406 aa23.39■■□□□ 1.33
CCDC7-203ENST00000362006 SPATA31A5Q5VU36 1347 aa23.38■■□□□ 1.33
CCDC7-203ENST00000362006 SPATA31A7Q8IWB4 1347 aa23.38■■□□□ 1.33
CCDC7-203ENST00000362006 CHL1O00533 1208 aa23.38■■□□□ 1.33
CCDC7-203ENST00000362006 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.38■■□□□ 1.33
CCDC7-203ENST00000362006 BCL9LQ86UU0 1499 aa23.38■■□□□ 1.33
CCDC7-203ENST00000362006 DISP2A7MBM2 1401 aa23.37■■□□□ 1.33
CCDC7-203ENST00000362006 VPS72Q15906 364 aa23.37■■□□□ 1.33
CCDC7-203ENST00000362006 TSR2Q969E8 191 aaKnown RBP23.37■■□□□ 1.33
CCDC7-203ENST00000362006 SUPT16HQ9Y5B9 1047 aaKnown RBP23.37■■□□□ 1.33
CCDC7-203ENST00000362006 RNMTO43148 476 aaKnown RBP23.36■■□□□ 1.33
CCDC7-203ENST00000362006 ADAMTS7Q9UKP4 1686 aa23.36■■□□□ 1.33
CCDC7-203ENST00000362006 WNK3Q9BYP7 1800 aa23.36■■□□□ 1.33
CCDC7-203ENST00000362006 TAF7Q15545 349 aaPredicted RBP23.36■■□□□ 1.33
CCDC7-203ENST00000362006 MBIPQ9NS73 344 aa23.36■■□□□ 1.33
CCDC7-203ENST00000362006 VIRMAQ69YN4 1812 aaKnown RBP23.36■■□□□ 1.33
CCDC7-203ENST00000362006 MPRIPQ6WCQ1 1025 aa23.35■■□□□ 1.33
CCDC7-203ENST00000362006 USP21Q9UK80 565 aa23.35■■□□□ 1.33
CCDC7-203ENST00000362006 CYP27B1O15528 508 aa23.35■■□□□ 1.33
CCDC7-203ENST00000362006 BARGINQ6ZT62 677 aa23.35■■□□□ 1.33
CCDC7-203ENST00000362006 FBXO41Q8TF61 875 aa23.35■■□□□ 1.33
CCDC7-203ENST00000362006 DCAF5Q96JK2 942 aa23.35■■□□□ 1.33
CCDC7-203ENST00000362006 TEFQ10587 303 aa23.34■■□□□ 1.33
CCDC7-203ENST00000362006 LGR6Q9HBX8 967 aa23.34■■□□□ 1.33
CCDC7-203ENST00000362006 CCDC9Q9Y3X0 531 aaKnown RBP23.34■■□□□ 1.33
CCDC7-203ENST00000362006 EXOSC9Q06265 439 aaKnown RBP23.33■■□□□ 1.33
CCDC7-203ENST00000362006 SCN11AQ9UI33 1791 aa23.33■■□□□ 1.33
CCDC7-203ENST00000362006 NKX1-1Q15270 411 aaPredicted RBP23.32■■□□□ 1.32
CCDC7-203ENST00000362006 TSPYL4Q9UJ04 414 aa23.32■■□□□ 1.32
CCDC7-203ENST00000362006 EXOC5O00471 708 aa23.31■■□□□ 1.32
CCDC7-203ENST00000362006 ZNF428Q96B54 188 aa23.31■■□□□ 1.32
CCDC7-203ENST00000362006 RNF123Q5XPI4 1314 aa23.31■■□□□ 1.32
CCDC7-203ENST00000362006 SHANK3Q9BYB0 1731 aa23.3■■□□□ 1.32
CCDC7-203ENST00000362006 NEFLP07196 543 aa23.3■■□□□ 1.32
CCDC7-203ENST00000362006 AFF2P51816 1311 aa23.3■■□□□ 1.32
CCDC7-203ENST00000362006 KDM6AO15550 1401 aaPredicted RBP23.28■■□□□ 1.32
CCDC7-203ENST00000362006 DDX54Q8TDD1 881 aaKnown RBP23.27■■□□□ 1.32
CCDC7-203ENST00000362006 SIPA1L3O60292 1781 aaPredicted RBP23.27■■□□□ 1.32
CCDC7-203ENST00000362006 TNS2Q63HR2 1409 aa23.27■■□□□ 1.32
CCDC7-203ENST00000362006 SLC52A2Q9HAB3 445 aa23.26■■□□□ 1.31
CCDC7-203ENST00000362006 ERVV-2B6SEH9 535 aa23.26■■□□□ 1.31
CCDC7-203ENST00000362006 SOS1Q07889 1333 aaPredicted RBP23.26■■□□□ 1.31
CCDC7-203ENST00000362006 DDB1Q16531 1140 aa23.26■■□□□ 1.31
CCDC7-203ENST00000362006 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.26■■□□□ 1.31
CCDC7-203ENST00000362006 MRC1P22897 1456 aa23.25■■□□□ 1.31
CCDC7-203ENST00000362006 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
CCDC7-203ENST00000362006 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
CCDC7-203ENST00000362006 MIS18AQ9NYP9 233 aa23.25■■□□□ 1.31
CCDC7-203ENST00000362006 TRPC5Q9UL62 973 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms