RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 EPS15P42566 896 aa22.13■■□□□ 1.13
CLIP2-202ENST00000361545 CADPS2Q86UW7 1296 aa22.13■■□□□ 1.13
CLIP2-202ENST00000361545 NAP1L1P55209 391 aaKnown RBP22.13■■□□□ 1.13
CLIP2-202ENST00000361545 TRIM22Q8IYM9 498 aa22.13■■□□□ 1.13
CLIP2-202ENST00000361545 SSH1Q8WYL5 1049 aa22.13■■□□□ 1.13
CLIP2-202ENST00000361545 LRPPRCP42704 1394 aaKnown RBP22.12■■□□□ 1.13
CLIP2-202ENST00000361545 THOC2Q8NI27 1593 aaKnown RBP22.12■■□□□ 1.13
CLIP2-202ENST00000361545 STK38Q15208 465 aa22.12■■□□□ 1.13
CLIP2-202ENST00000361545 TMEM132AQ24JP5 1023 aa22.12■■□□□ 1.13
CLIP2-202ENST00000361545 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
CLIP2-202ENST00000361545 RNF214Q8ND24 703 aa22.12■■□□□ 1.13
CLIP2-202ENST00000361545 CCDC70Q6NSX1 233 aa22.11■■□□□ 1.13
CLIP2-202ENST00000361545 FBLN1P23142 703 aa22.11■■□□□ 1.13
CLIP2-202ENST00000361545 KINO60870 393 aaKnown RBP22.11■■□□□ 1.13
CLIP2-202ENST00000361545 TRMT112Q9UI30 125 aaKnown RBP22.1■■□□□ 1.13
CLIP2-202ENST00000361545 FMNL2Q96PY5 1086 aa22.09■■□□□ 1.13
CLIP2-202ENST00000361545 NAT10Q9H0A0 1025 aaKnown RBP22.09■■□□□ 1.13
CLIP2-202ENST00000361545 OFD1O75665 1012 aa22.09■■□□□ 1.13
CLIP2-202ENST00000361545 KRT18P05783 430 aaKnown RBP22.09■■□□□ 1.13
CLIP2-202ENST00000361545 HSP90AA2PQ14568 343 aaPredicted RBP22.09■■□□□ 1.13
CLIP2-202ENST00000361545 CT47A1Q5JQC4 288 aaPredicted RBP22.09■■□□□ 1.13
CLIP2-202ENST00000361545 KDM5BQ9UGL1 1544 aa22.09■■□□□ 1.13
CLIP2-202ENST00000361545 TXLNAP40222 546 aa22.09■■□□□ 1.13
CLIP2-202ENST00000361545 BLOC1S2Q6QNY1 142 aa22.09■■□□□ 1.13
CLIP2-202ENST00000361545 UBAC1Q9BSL1 405 aa22.09■■□□□ 1.13
CLIP2-202ENST00000361545 SCAF11Q99590 1463 aaKnown RBP22.09■■□□□ 1.13
CLIP2-202ENST00000361545 PRPF40AO75400 957 aaKnown RBP22.09■■□□□ 1.13
CLIP2-202ENST00000361545 GPTP24298 496 aa22.09■■□□□ 1.13
CLIP2-202ENST00000361545 AIDAQ96BJ3 306 aa22.09■■□□□ 1.13
CLIP2-202ENST00000361545 ZBTB3Q9H5J0 574 aa22.09■■□□□ 1.13
CLIP2-202ENST00000361545 GPATCH8Q9UKJ3 1502 aaKnown RBP22.08■■□□□ 1.13
CLIP2-202ENST00000361545 PDILTQ8N807 584 aa22.08■■□□□ 1.13
CLIP2-202ENST00000361545 ANKIB1Q9P2G1 1089 aa22.08■■□□□ 1.13
CLIP2-202ENST00000361545 NFKBIBQ15653 356 aa22.08■■□□□ 1.13
CLIP2-202ENST00000361545 SMARCA5O60264 1052 aaPredicted RBP22.08■■□□□ 1.12
CLIP2-202ENST00000361545 ANKRD1Q15327 319 aa22.08■■□□□ 1.12
CLIP2-202ENST00000361545 ZNF396Q96N95 335 aaPredicted RBP22.08■■□□□ 1.12
CLIP2-202ENST00000361545 ANKRD24Q8TF21 1146 aa22.08■■□□□ 1.12
CLIP2-202ENST00000361545 JAKMIP1Q96N16 626 aaKnown RBP22.08■■□□□ 1.12
CLIP2-202ENST00000361545 RSPH6AQ9H0K4 717 aa22.07■■□□□ 1.12
CLIP2-202ENST00000361545 PIBF1Q8WXW3 757 aa22.07■■□□□ 1.12
CLIP2-202ENST00000361545 CAVIN1Q6NZI2 390 aaKnown RBP22.07■■□□□ 1.12
CLIP2-202ENST00000361545 ZNF219Q9P2Y4 722 aaPredicted RBP22.07■■□□□ 1.12
CLIP2-202ENST00000361545 CTNNA3Q9UI47 895 aa22.07■■□□□ 1.12
CLIP2-202ENST00000361545 SOGA3Q5TF21 947 aa22.07■■□□□ 1.12
CLIP2-202ENST00000361545 KIF1BPQ96EK5 621 aa22.06■■□□□ 1.12
CLIP2-202ENST00000361545 IFNL2Q8IZJ0 200 aa22.06■■□□□ 1.12
CLIP2-202ENST00000361545 VSIG10Q8N0Z9 540 aa22.06■■□□□ 1.12
CLIP2-202ENST00000361545 HMGB2P26583 209 aaKnown RBP22.05■■□□□ 1.12
CLIP2-202ENST00000361545 RARSP54136 660 aaKnown RBP22.05■■□□□ 1.12
CLIP2-202ENST00000361545 IFIT5Q13325 482 aaKnown RBP22.05■■□□□ 1.12
CLIP2-202ENST00000361545 DNAAF4Q8WXU2 420 aa22.05■■□□□ 1.12
CLIP2-202ENST00000361545 IFIT1P09914 478 aaKnown RBP22.05■■□□□ 1.12
CLIP2-202ENST00000361545 CAVIN4Q5BKX8 364 aa22.05■■□□□ 1.12
CLIP2-202ENST00000361545 ATP10BO94823 1461 aa22.05■■□□□ 1.12
CLIP2-202ENST00000361545 MAP3K1Q13233 1512 aa22.05■■□□□ 1.12
CLIP2-202ENST00000361545 BOLA2Q9H3K6 86 aa22.05■■□□□ 1.12
CLIP2-202ENST00000361545 DBF4Q9UBU7 674 aaPredicted RBP22.05■■□□□ 1.12
CLIP2-202ENST00000361545 AKAP2Q9Y2D5 859 aa22.05■■□□□ 1.12
CLIP2-202ENST00000361545 FAM83GA6ND36 823 aa22.04■■□□□ 1.12
CLIP2-202ENST00000361545 TMOD2Q9NZR1 351 aa22.04■■□□□ 1.12
CLIP2-202ENST00000361545 PDRG1Q9NUG6 133 aa22.04■■□□□ 1.12
CLIP2-202ENST00000361545 MSH6P52701 1360 aa22.04■■□□□ 1.12
CLIP2-202ENST00000361545 TTC21BQ7Z4L5 1316 aa22.04■■□□□ 1.12
CLIP2-202ENST00000361545 PLCH2O75038 1416 aa22.04■■□□□ 1.12
CLIP2-202ENST00000361545 A0A087WZG4 1122 aa22.03■■□□□ 1.12
CLIP2-202ENST00000361545 UBAP1LF5GYI3 381 aa22.03■■□□□ 1.12
CLIP2-202ENST00000361545 ABCC11Q96J66 1382 aa22.03■■□□□ 1.12
CLIP2-202ENST00000361545 DISP3Q9P2K9 1392 aa22.03■■□□□ 1.12
CLIP2-202ENST00000361545 ALDH1L2Q3SY69 923 aa22.02■■□□□ 1.12
CLIP2-202ENST00000361545 LARP1BQ659C4 914 aaKnown RBP22.02■■□□□ 1.12
CLIP2-202ENST00000361545 ZHX3Q9H4I2 956 aa22.02■■□□□ 1.12
CLIP2-202ENST00000361545 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
CLIP2-202ENST00000361545 MX1P20591 662 aa22.02■■□□□ 1.12
CLIP2-202ENST00000361545 ZFYVE27Q5T4F4 411 aa22.02■■□□□ 1.12
CLIP2-202ENST00000361545 HYPKQ9NX55 129 aa22.02■■□□□ 1.12
CLIP2-202ENST00000361545 ODF2Q5BJF6 829 aa22.02■■□□□ 1.12
CLIP2-202ENST00000361545 LRRFIP2Q9Y608 721 aaKnown RBP22.02■■□□□ 1.12
CLIP2-202ENST00000361545 MPHOSPH10O00566 681 aaKnown RBP22.01■■□□□ 1.11
CLIP2-202ENST00000361545 HSP90AB3PQ58FF7 597 aa22.01■■□□□ 1.11
CLIP2-202ENST00000361545 CCDC8Q9H0W5 538 aaPredicted RBP22.01■■□□□ 1.11
CLIP2-202ENST00000361545 ME1P48163 572 aa22.01■■□□□ 1.11
CLIP2-202ENST00000361545 BRPF1P55201 1214 aaPredicted RBP22.01■■□□□ 1.11
CLIP2-202ENST00000361545 JMYQ8N9B5 988 aa22.01■■□□□ 1.11
CLIP2-202ENST00000361545 RPGRQ92834 1020 aaKnown RBP22.01■■□□□ 1.11
CLIP2-202ENST00000361545 USP5P45974 858 aa22■■□□□ 1.11
CLIP2-202ENST00000361545 IMMTQ16891 758 aaKnown RBP22■■□□□ 1.11
CLIP2-202ENST00000361545 MINDY4BA8MYZ0 360 aa22■■□□□ 1.11
CLIP2-202ENST00000361545 TRAK2O60296 914 aa22■■□□□ 1.11
CLIP2-202ENST00000361545 ATP5J2-PTCD1G3V325 749 aa22■■□□□ 1.11
CLIP2-202ENST00000361545 RPRD2Q5VT52 1461 aaKnown RBP22■■□□□ 1.11
CLIP2-202ENST00000361545 FLIIQ13045 1269 aa22■■□□□ 1.11
CLIP2-202ENST00000361545 UHRF1BP1LA0JNW5 1464 aa21.99■■□□□ 1.11
CLIP2-202ENST00000361545 TEX14Q8IWB6 1497 aa21.99■■□□□ 1.11
CLIP2-202ENST00000361545 K7ELQ4 463 aaPredicted RBP21.99■■□□□ 1.11
CLIP2-202ENST00000361545 GLRX3O76003 335 aaKnown RBP21.99■■□□□ 1.11
CLIP2-202ENST00000361545 MBD3O95983 291 aa21.99■■□□□ 1.11
CLIP2-202ENST00000361545 C20orf194Q5TEA3 1177 aa21.99■■□□□ 1.11
CLIP2-202ENST00000361545 TRIM5Q9C035 493 aa21.99■■□□□ 1.11
CLIP2-202ENST00000361545 HSP90AB2PQ58FF8 381 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms