RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 SKIDA1Q1XH10 827 aa23.92■■□□□ 1.42
SMURF1-202ENST00000361368 PIP4K2BP78356 416 aa23.92■■□□□ 1.42
SMURF1-202ENST00000361368 MATR3P43243 847 aaKnown RBP eCLIP23.91■■□□□ 1.423e-7■■■■□ 24.5
SMURF1-202ENST00000361368 AKAP2Q9Y2D5 859 aa23.91■■□□□ 1.42
SMURF1-202ENST00000361368 ANKRD30BQ9BXX2 1392 aa23.91■■□□□ 1.42
SMURF1-202ENST00000361368 AIDAQ96BJ3 306 aa23.91■■□□□ 1.42
SMURF1-202ENST00000361368 CEP131Q9UPN4 1083 aa23.91■■□□□ 1.42
SMURF1-202ENST00000361368 PDRG1Q9NUG6 133 aa23.91■■□□□ 1.42
SMURF1-202ENST00000361368 FCHSD2O94868 740 aa23.9■■□□□ 1.42
SMURF1-202ENST00000361368 IQCEQ6IPM2 695 aa23.9■■□□□ 1.42
SMURF1-202ENST00000361368 IMMTQ16891 758 aaKnown RBP23.9■■□□□ 1.42
SMURF1-202ENST00000361368 PPP6R1Q9UPN7 881 aa23.9■■□□□ 1.42
SMURF1-202ENST00000361368 POTEJP0CG39 1038 aa23.9■■□□□ 1.42
SMURF1-202ENST00000361368 RPAP2Q8IXW5 612 aaPredicted RBP23.89■■□□□ 1.42
SMURF1-202ENST00000361368 CEP57L1Q8IYX8 460 aa23.89■■□□□ 1.42
SMURF1-202ENST00000361368 CDCA7LQ96GN5 454 aa23.89■■□□□ 1.42
SMURF1-202ENST00000361368 KIAA1107Q9UPP5 1409 aa23.89■■□□□ 1.42
SMURF1-202ENST00000361368 VSIG10Q8N0Z9 540 aa23.89■■□□□ 1.41
SMURF1-202ENST00000361368 BICDL1Q6ZP65 573 aa23.89■■□□□ 1.41
SMURF1-202ENST00000361368 GNAT3A8MTJ3 354 aa23.88■■□□□ 1.41
SMURF1-202ENST00000361368 EZRP15311 586 aaKnown RBP23.88■■□□□ 1.41
SMURF1-202ENST00000361368 SLC26A8Q96RN1 970 aa23.88■■□□□ 1.41
SMURF1-202ENST00000361368 ANKRD62A6NC57 917 aa23.88■■□□□ 1.41
SMURF1-202ENST00000361368 MVPQ14764 893 aaKnown RBP23.88■■□□□ 1.41
SMURF1-202ENST00000361368 PPP1R12BO60237 982 aaPredicted RBP23.87■■□□□ 1.41
SMURF1-202ENST00000361368 CAVIN4Q5BKX8 364 aa23.87■■□□□ 1.41
SMURF1-202ENST00000361368 ZPR1O75312 459 aa23.87■■□□□ 1.41
SMURF1-202ENST00000361368 K7ELQ4 463 aaPredicted RBP23.87■■□□□ 1.41
SMURF1-202ENST00000361368 SEPT11Q9NVA2 429 aaKnown RBP23.87■■□□□ 1.41
SMURF1-202ENST00000361368 IDH1O75874 414 aaKnown RBP23.86■■□□□ 1.41
SMURF1-202ENST00000361368 TSPYL1Q9H0U9 437 aa23.86■■□□□ 1.41
SMURF1-202ENST00000361368 ERLIN1O75477 346 aa23.86■■□□□ 1.41
SMURF1-202ENST00000361368 SPATA32Q96LK8 384 aa23.86■■□□□ 1.41
SMURF1-202ENST00000361368 NBPF1Q3BBV0 1214 aa23.86■■□□□ 1.41
SMURF1-202ENST00000361368 LEKR1Q6ZMV7 388 aa23.86■■□□□ 1.41
SMURF1-202ENST00000361368 SEC63Q9UGP8 760 aaKnown RBP23.86■■□□□ 1.41
SMURF1-202ENST00000361368 MAP4K4O95819 1239 aaPredicted RBP23.85■■□□□ 1.41
SMURF1-202ENST00000361368 CHD1LQ86WJ1 897 aa23.85■■□□□ 1.41
SMURF1-202ENST00000361368 ERBINQ96RT1 1412 aa23.85■■□□□ 1.41
SMURF1-202ENST00000361368 METTL24Q5JXM2 366 aa23.85■■□□□ 1.41
SMURF1-202ENST00000361368 IFIT1P09914 478 aaKnown RBP23.85■■□□□ 1.41
SMURF1-202ENST00000361368 PPP4R3AQ6IN85 833 aa23.85■■□□□ 1.41
SMURF1-202ENST00000361368 USP5P45974 858 aa23.85■■□□□ 1.41
SMURF1-202ENST00000361368 TMOD3Q9NYL9 352 aa23.85■■□□□ 1.41
SMURF1-202ENST00000361368 JAKMIP1Q96N16 626 aaKnown RBP23.84■■□□□ 1.41
SMURF1-202ENST00000361368 SMTNL1A8MU46 457 aa23.84■■□□□ 1.41
SMURF1-202ENST00000361368 GOLGA6L7A0A1B0GV03 622 aa23.84■■□□□ 1.41
SMURF1-202ENST00000361368 CETN2P41208 172 aa23.84■■□□□ 1.41
SMURF1-202ENST00000361368 CRACR2BQ8N4Y2 399 aaPredicted RBP23.84■■□□□ 1.41
SMURF1-202ENST00000361368 JAKMIP3Q5VZ66 844 aa23.83■■□□□ 1.41
SMURF1-202ENST00000361368 NFE2L2Q16236 605 aa23.83■■□□□ 1.4
SMURF1-202ENST00000361368 BCL11BQ9C0K0 894 aaPredicted RBP23.82■■□□□ 1.4
SMURF1-202ENST00000361368 ABCF2Q9UG63 623 aa23.82■■□□□ 1.4
SMURF1-202ENST00000361368 ENOX2Q16206 610 aaKnown RBP23.82■■□□□ 1.4
SMURF1-202ENST00000361368 POLR3DP05423 398 aaPredicted RBP23.81■■□□□ 1.4
SMURF1-202ENST00000361368 HSP90AB3PQ58FF7 597 aa23.81■■□□□ 1.4
SMURF1-202ENST00000361368 LARP1Q6PKG0 1096 aaKnown RBP23.81■■□□□ 1.4
SMURF1-202ENST00000361368 CWC27Q6UX04 472 aaKnown RBP23.81■■□□□ 1.4
SMURF1-202ENST00000361368 GBP2P32456 591 aaPredicted RBP23.81■■□□□ 1.4
SMURF1-202ENST00000361368 CCDC61Q9Y6R9 512 aa23.81■■□□□ 1.4
SMURF1-202ENST00000361368 CCDC66A2RUB6 948 aa23.81■■□□□ 1.4
SMURF1-202ENST00000361368 ZC3H6P61129 1189 aaKnown RBP23.81■■□□□ 1.4
SMURF1-202ENST00000361368 SPC24Q8NBT2 197 aa23.81■■□□□ 1.4
SMURF1-202ENST00000361368 TAF4BQ92750 862 aa23.81■■□□□ 1.4
SMURF1-202ENST00000361368 U3KPZ7 1027 aaPredicted RBP23.81■■□□□ 1.4
SMURF1-202ENST00000361368 BCAR3O75815 825 aa23.81■■□□□ 1.4
SMURF1-202ENST00000361368 RRS1Q15050 365 aaKnown RBP23.81■■□□□ 1.4
SMURF1-202ENST00000361368 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
SMURF1-202ENST00000361368 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
SMURF1-202ENST00000361368 RAB11FIP3O75154 756 aa23.81■■□□□ 1.4
SMURF1-202ENST00000361368 SLF2Q8IX21 1173 aa23.8■■□□□ 1.4
SMURF1-202ENST00000361368 AMOTQ4VCS5 1084 aa23.8■■□□□ 1.4
SMURF1-202ENST00000361368 EIF3JO75822 258 aaKnown RBP23.8■■□□□ 1.4
SMURF1-202ENST00000361368 NUDT16Q96DE0 195 aaKnown RBP23.8■■□□□ 1.4
SMURF1-202ENST00000361368 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
SMURF1-202ENST00000361368 CCDC196A0A1B0GTZ2 297 aa23.79■■□□□ 1.4
SMURF1-202ENST00000361368 EIF5P55010 431 aaKnown RBP23.79■■□□□ 1.4
SMURF1-202ENST00000361368 ZNF397Q8NF99 534 aaPredicted RBP23.79■■□□□ 1.4
SMURF1-202ENST00000361368 MKNK2Q9HBH9 465 aa23.79■■□□□ 1.4
SMURF1-202ENST00000361368 KIF1BPQ96EK5 621 aa23.78■■□□□ 1.4
SMURF1-202ENST00000361368 UPF3BQ9BZI7 483 aaKnown RBP23.78■■□□□ 1.4
SMURF1-202ENST00000361368 NUP62CLQ9H1M0 184 aa23.78■■□□□ 1.4
SMURF1-202ENST00000361368 ERICH3Q5RHP9 1530 aa23.78■■□□□ 1.4
SMURF1-202ENST00000361368 DAPK1P53355 1430 aa23.78■■□□□ 1.4
SMURF1-202ENST00000361368 SCLT1Q96NL6 688 aa23.77■■□□□ 1.4
SMURF1-202ENST00000361368 TROQ12816 1431 aaPredicted RBP23.77■■□□□ 1.4
SMURF1-202ENST00000361368 PHAXQ9H814 394 aaKnown RBP23.77■■□□□ 1.4
SMURF1-202ENST00000361368 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
SMURF1-202ENST00000361368 EFCAB5A4FU69 1503 aa23.77■■□□□ 1.39
SMURF1-202ENST00000361368 CFTRP13569 1480 aa23.76■■□□□ 1.39
SMURF1-202ENST00000361368 CCDC112Q8NEF3 446 aa23.76■■□□□ 1.39
SMURF1-202ENST00000361368 EHMT1Q9H9B1 1298 aa23.76■■□□□ 1.39
SMURF1-202ENST00000361368 IL1RAPL2Q9NP60 686 aa23.76■■□□□ 1.39
SMURF1-202ENST00000361368 KIAA0754O94854 1291 aa23.76■■□□□ 1.39
SMURF1-202ENST00000361368 GLRX3O76003 335 aaKnown RBP23.76■■□□□ 1.39
SMURF1-202ENST00000361368 CIZ1Q9ULV3 898 aaPredicted RBP23.76■■□□□ 1.39
SMURF1-202ENST00000361368 XPCQ01831 940 aaPredicted RBP23.76■■□□□ 1.39
SMURF1-202ENST00000361368 RAB34Q9BZG1 259 aa23.76■■□□□ 1.39
SMURF1-202ENST00000361368 DZIP1Q86YF9 867 aaKnown RBP23.75■■□□□ 1.39
SMURF1-202ENST00000361368 CUL5Q93034 780 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms