RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 RRP7AQ9Y3A4 280 aaKnown RBP22.38■■□□□ 1.17
LMNA-202ENST00000361308 SALL2Q9Y467 1007 aaPredicted RBP22.38■■□□□ 1.17
LMNA-202ENST00000361308 GAS2L2Q8NHY3 880 aa22.37■■□□□ 1.17
LMNA-202ENST00000361308 GJD4Q96KN9 370 aaPredicted RBP22.37■■□□□ 1.17
LMNA-202ENST00000361308 NFE2L2Q16236 605 aa22.37■■□□□ 1.17
LMNA-202ENST00000361308 BARGINQ6ZT62 677 aa22.37■■□□□ 1.17
LMNA-202ENST00000361308 CDCA7Q9BWT1 371 aaPredicted RBP22.37■■□□□ 1.17
LMNA-202ENST00000361308 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.36■■□□□ 1.17
LMNA-202ENST00000361308 RIPK4P57078 832 aa22.36■■□□□ 1.17
LMNA-202ENST00000361308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.36■■□□□ 1.17
LMNA-202ENST00000361308 SPG7Q9UQ90 795 aa22.36■■□□□ 1.17
LMNA-202ENST00000361308 MEGF6O75095 1541 aa22.36■■□□□ 1.17
LMNA-202ENST00000361308 NGEFQ8N5V2 710 aa22.35■■□□□ 1.17
LMNA-202ENST00000361308 PLEKHG2Q9H7P9 1386 aa22.34■■□□□ 1.17
LMNA-202ENST00000361308 ATRNO75882 1429 aa22.34■■□□□ 1.17
LMNA-202ENST00000361308 ZCRB1Q8TBF4 217 aaKnown RBP22.34■■□□□ 1.17
LMNA-202ENST00000361308 FAM98CQ17RN3 349 aaKnown RBP22.33■■□□□ 1.17
LMNA-202ENST00000361308 OVOS2A0A0G2JMS6 1433 aa22.33■■□□□ 1.16
LMNA-202ENST00000361308 NCBP3Q53F19 620 aaKnown RBP22.32■■□□□ 1.16
LMNA-202ENST00000361308 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
LMNA-202ENST00000361308 EXOC5O00471 708 aa22.31■■□□□ 1.16
LMNA-202ENST00000361308 ZNF530Q6P9A1 599 aaPredicted RBP22.31■■□□□ 1.16
LMNA-202ENST00000361308 C1orf141Q5JVX7 400 aa22.31■■□□□ 1.16
LMNA-202ENST00000361308 DISP2A7MBM2 1401 aa22.31■■□□□ 1.16
LMNA-202ENST00000361308 GNAT3A8MTJ3 354 aa22.29■■□□□ 1.16
LMNA-202ENST00000361308 LMOD3Q0VAK6 560 aa22.29■■□□□ 1.16
LMNA-202ENST00000361308 CCDC27Q2M243 656 aa22.29■■□□□ 1.16
LMNA-202ENST00000361308 AKAP4Q5JQC9 854 aa22.29■■□□□ 1.16
LMNA-202ENST00000361308 A0A0G2JS52 829 aa22.28■■□□□ 1.16
LMNA-202ENST00000361308 MYT1Q01538 1121 aa22.28■■□□□ 1.16
LMNA-202ENST00000361308 DDB1Q16531 1140 aa22.28■■□□□ 1.16
LMNA-202ENST00000361308 IFNL2Q8IZJ0 200 aa22.28■■□□□ 1.16
LMNA-202ENST00000361308 RTF1Q92541 710 aaKnown RBP22.28■■□□□ 1.16
LMNA-202ENST00000361308 PARP4Q9UKK3 1724 aaKnown RBP22.28■■□□□ 1.16
LMNA-202ENST00000361308 WWC1Q8IX03 1113 aa22.28■■□□□ 1.16
LMNA-202ENST00000361308 DDX54Q8TDD1 881 aaKnown RBP22.28■■□□□ 1.16
LMNA-202ENST00000361308 TRIM35Q9UPQ4 493 aa22.28■■□□□ 1.16
LMNA-202ENST00000361308 PCDH11XQ9BZA7 1347 aa22.28■■□□□ 1.16
LMNA-202ENST00000361308 PCDH11YQ9BZA8 1340 aa22.28■■□□□ 1.16
LMNA-202ENST00000361308 ZBED9Q6R2W3 1325 aa22.27■■□□□ 1.16
LMNA-202ENST00000361308 HTATSF1O43719 755 aaKnown RBP22.26■■□□□ 1.15
LMNA-202ENST00000361308 ONECUT3O60422 494 aaPredicted RBP22.26■■□□□ 1.15
LMNA-202ENST00000361308 RBM6P78332 1123 aaKnown RBP22.26■■□□□ 1.15
LMNA-202ENST00000361308 RGS17Q9UGC6 210 aaPredicted RBP22.26■■□□□ 1.15
LMNA-202ENST00000361308 CYP27B1O15528 508 aa22.26■■□□□ 1.15
LMNA-202ENST00000361308 PHKG2P15735 406 aa22.26■■□□□ 1.15
LMNA-202ENST00000361308 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
LMNA-202ENST00000361308 GLI3P10071 1580 aa22.25■■□□□ 1.15
LMNA-202ENST00000361308 HSP90AB1P08238 724 aaKnown RBP22.23■■□□□ 1.15
LMNA-202ENST00000361308 DCTN1Q14203 1278 aa22.23■■□□□ 1.15
LMNA-202ENST00000361308 MCM10Q7L590 875 aa22.23■■□□□ 1.15
LMNA-202ENST00000361308 RXRBP28702 533 aa22.23■■□□□ 1.15
LMNA-202ENST00000361308 MPRIPQ6WCQ1 1025 aa22.23■■□□□ 1.15
LMNA-202ENST00000361308 PKD1L3Q7Z443 1732 aa22.22■■□□□ 1.15
LMNA-202ENST00000361308 ZNF521Q96K83 1311 aa22.21■■□□□ 1.15
LMNA-202ENST00000361308 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
LMNA-202ENST00000361308 WDR63Q8IWG1 891 aa22.21■■□□□ 1.15
LMNA-202ENST00000361308 SEPT12Q8IYM1 358 aa22.21■■□□□ 1.15
LMNA-202ENST00000361308 IL17REQ8NFR9 667 aa22.21■■□□□ 1.15
LMNA-202ENST00000361308 WNK3Q9BYP7 1800 aa22.21■■□□□ 1.15
LMNA-202ENST00000361308 TNS2Q63HR2 1409 aa22.21■■□□□ 1.15
LMNA-202ENST00000361308 CALD1Q05682 793 aaKnown RBP22.2■■□□□ 1.14
LMNA-202ENST00000361308 DCAF5Q96JK2 942 aa22.2■■□□□ 1.14
LMNA-202ENST00000361308 THUMPD2Q9BTF0 503 aaKnown RBP22.2■■□□□ 1.14
LMNA-202ENST00000361308 LGR6Q9HBX8 967 aa22.2■■□□□ 1.14
LMNA-202ENST00000361308 DLG5Q8TDM6 1919 aa22.2■■□□□ 1.14
LMNA-202ENST00000361308 GOLGA2Q08379 1002 aa22.2■■□□□ 1.14
LMNA-202ENST00000361308 POTEAQ6S8J7 498 aa22.2■■□□□ 1.14
LMNA-202ENST00000361308 RNMTO43148 476 aaKnown RBP22.19■■□□□ 1.14
LMNA-202ENST00000361308 NKX1-1Q15270 411 aaPredicted RBP22.19■■□□□ 1.14
LMNA-202ENST00000361308 MARCH10Q8NA82 808 aaPredicted RBP22.17■■□□□ 1.14
LMNA-202ENST00000361308 LRRC37A3O60309 1634 aa22.16■■□□□ 1.14
LMNA-202ENST00000361308 THSD7AQ9UPZ6 1657 aa22.16■■□□□ 1.14
LMNA-202ENST00000361308 TEFQ10587 303 aa22.15■■□□□ 1.14
LMNA-202ENST00000361308 CEMIPQ8WUJ3 1361 aa22.15■■□□□ 1.14
LMNA-202ENST00000361308 CDCA7LQ96GN5 454 aa22.14■■□□□ 1.14
LMNA-202ENST00000361308 LAS1LQ9Y4W2 734 aaKnown RBP22.14■■□□□ 1.14
LMNA-202ENST00000361308 SHANK3Q9BYB0 1731 aa22.14■■□□□ 1.14
LMNA-202ENST00000361308 IL16Q14005 1332 aa22.14■■□□□ 1.13
LMNA-202ENST00000361308 KDM6AO15550 1401 aaPredicted RBP22.13■■□□□ 1.13
LMNA-202ENST00000361308 ERVV-2B6SEH9 535 aa22.12■■□□□ 1.13
LMNA-202ENST00000361308 E9PSI1 815 aa22.12■■□□□ 1.13
LMNA-202ENST00000361308 GNAI1P63096 354 aa22.12■■□□□ 1.13
LMNA-202ENST00000361308 TAF7Q15545 349 aaPredicted RBP22.12■■□□□ 1.13
LMNA-202ENST00000361308 CFAP44Q96MT7 982 aa22.12■■□□□ 1.13
LMNA-202ENST00000361308 SPINK5Q9NQ38 1064 aaPredicted RBP22.12■■□□□ 1.13
LMNA-202ENST00000361308 CABP4P57796 275 aa22.11■■□□□ 1.13
LMNA-202ENST00000361308 SLFN5Q08AF3 891 aa22.11■■□□□ 1.13
LMNA-202ENST00000361308 IFT57Q9NWB7 429 aa22.11■■□□□ 1.13
LMNA-202ENST00000361308 KRT27Q7Z3Y8 459 aa22.11■■□□□ 1.13
LMNA-202ENST00000361308 NFATC2IPQ8NCF5 419 aa22.11■■□□□ 1.13
LMNA-202ENST00000361308 MYH16Q9H6N6 1097 aa22.11■■□□□ 1.13
LMNA-202ENST00000361308 SLC52A2Q9HAB3 445 aa22.11■■□□□ 1.13
LMNA-202ENST00000361308 ZNF853P0CG23 659 aa22.09■■□□□ 1.13
LMNA-202ENST00000361308 CHL1O00533 1208 aa22.08■■□□□ 1.12
LMNA-202ENST00000361308 FAM182BQ5T319 152 aa22.08■■□□□ 1.12
LMNA-202ENST00000361308 MIS18AQ9NYP9 233 aa22.08■■□□□ 1.12
LMNA-202ENST00000361308 BTBD11A6QL63 1104 aa22.07■■□□□ 1.12
LMNA-202ENST00000361308 SYTL4Q96C24 671 aaPredicted RBP22.07■■□□□ 1.12
LMNA-202ENST00000361308 BABAM1Q9NWV8 329 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms