RNA–Protein interactions for RNA: ENST00000360835.8

SCUBE1-202, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-202ENST00000360835 BRPF1P55201 1214 aaPredicted RBP17.31■□□□□ 0.36
SCUBE1-202ENST00000360835 SYCE3A1L190 88 aa17.31■□□□□ 0.36
SCUBE1-202ENST00000360835 TXNDC2Q86VQ3 553 aa17.31■□□□□ 0.36
SCUBE1-202ENST00000360835 SIL1Q9H173 461 aa17.31■□□□□ 0.36
SCUBE1-202ENST00000360835 ZSCAN25Q6NSZ9 544 aa17.3■□□□□ 0.36
SCUBE1-202ENST00000360835 RARSP54136 660 aaKnown RBP17.3■□□□□ 0.36
SCUBE1-202ENST00000360835 ZNF530Q6P9A1 599 aaPredicted RBP17.3■□□□□ 0.36
SCUBE1-202ENST00000360835 CWC27Q6UX04 472 aaKnown RBP17.3■□□□□ 0.36
SCUBE1-202ENST00000360835 AXDND1Q5T1B0 1012 aaPredicted RBP17.3■□□□□ 0.36
SCUBE1-202ENST00000360835 CASTP20810 708 aaKnown RBP17.3■□□□□ 0.36
SCUBE1-202ENST00000360835 CNNM1Q9NRU3 951 aa17.3■□□□□ 0.36
SCUBE1-202ENST00000360835 MAP3K11Q16584 847 aa17.3■□□□□ 0.36
SCUBE1-202ENST00000360835 CCDC191Q8NCU4 936 aa17.29■□□□□ 0.36
SCUBE1-202ENST00000360835 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
SCUBE1-202ENST00000360835 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
SCUBE1-202ENST00000360835 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
SCUBE1-202ENST00000360835 EIF3JO75822 258 aaKnown RBP17.29■□□□□ 0.36
SCUBE1-202ENST00000360835 CCDC69A6NI79 296 aa17.29■□□□□ 0.36
SCUBE1-202ENST00000360835 CTNNA3Q9UI47 895 aa17.29■□□□□ 0.36
SCUBE1-202ENST00000360835 IQCEQ6IPM2 695 aa17.28■□□□□ 0.36
SCUBE1-202ENST00000360835 ABCC5O15440 1437 aa17.28■□□□□ 0.36
SCUBE1-202ENST00000360835 GOLGA6L10A6NI86 522 aa17.28■□□□□ 0.36
SCUBE1-202ENST00000360835 MX1P20591 662 aa17.28■□□□□ 0.36
SCUBE1-202ENST00000360835 KIF2AO00139 706 aaPredicted RBP17.27■□□□□ 0.36
SCUBE1-202ENST00000360835 UPF3BQ9BZI7 483 aaKnown RBP17.27■□□□□ 0.36
SCUBE1-202ENST00000360835 RAB11FIP3O75154 756 aa17.27■□□□□ 0.35
SCUBE1-202ENST00000360835 DHX29Q7Z478 1369 aaKnown RBP17.27■□□□□ 0.35
SCUBE1-202ENST00000360835 C20orf194Q5TEA3 1177 aa17.27■□□□□ 0.35
SCUBE1-202ENST00000360835 SMTNL1A8MU46 457 aa17.26■□□□□ 0.35
SCUBE1-202ENST00000360835 CCDC183Q5T5S1 534 aa17.26■□□□□ 0.35
SCUBE1-202ENST00000360835 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
SCUBE1-202ENST00000360835 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
SCUBE1-202ENST00000360835 ERLIN2O94905 339 aa17.26■□□□□ 0.35
SCUBE1-202ENST00000360835 PKNOX2Q96KN3 472 aa17.26■□□□□ 0.35
SCUBE1-202ENST00000360835 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
SCUBE1-202ENST00000360835 RRS1Q15050 365 aaKnown RBP17.25■□□□□ 0.35
SCUBE1-202ENST00000360835 NOL7Q9UMY1 257 aaKnown RBP17.25■□□□□ 0.35
SCUBE1-202ENST00000360835 MTMR7Q9Y216 660 aa17.25■□□□□ 0.35
SCUBE1-202ENST00000360835 SPG7Q9UQ90 795 aa17.25■□□□□ 0.35
SCUBE1-202ENST00000360835 BTBD11A6QL63 1104 aa17.25■□□□□ 0.35
SCUBE1-202ENST00000360835 MPNDQ8N594 471 aa17.25■□□□□ 0.35
SCUBE1-202ENST00000360835 KRT18P05783 430 aaKnown RBP17.24■□□□□ 0.35
SCUBE1-202ENST00000360835 LAMC3Q9Y6N6 1575 aa17.24■□□□□ 0.35
SCUBE1-202ENST00000360835 WASF1Q92558 559 aa17.24■□□□□ 0.35
SCUBE1-202ENST00000360835 NSD2O96028 1365 aa17.24■□□□□ 0.35
SCUBE1-202ENST00000360835 SH2B1Q9NRF2 756 aaPredicted RBP17.24■□□□□ 0.35
SCUBE1-202ENST00000360835 CABP4P57796 275 aa17.24■□□□□ 0.35
SCUBE1-202ENST00000360835 CCDC57Q2TAC2 916 aa17.24■□□□□ 0.35
SCUBE1-202ENST00000360835 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
SCUBE1-202ENST00000360835 C11orf95C9JLR9 678 aaPredicted RBP17.24■□□□□ 0.35
SCUBE1-202ENST00000360835 PDCL2Q8N4E4 241 aa17.23■□□□□ 0.35
SCUBE1-202ENST00000360835 KIF1BPQ96EK5 621 aa17.23■□□□□ 0.35
SCUBE1-202ENST00000360835 GNAT3A8MTJ3 354 aa17.23■□□□□ 0.35
SCUBE1-202ENST00000360835 DEF6Q9H4E7 631 aa17.23■□□□□ 0.35
SCUBE1-202ENST00000360835 ZFYVE27Q5T4F4 411 aa17.23■□□□□ 0.35
SCUBE1-202ENST00000360835 IKQ13123 557 aaPredicted RBP17.23■□□□□ 0.35
SCUBE1-202ENST00000360835 TSPYL1Q9H0U9 437 aa17.23■□□□□ 0.35
SCUBE1-202ENST00000360835 CCDC181Q5TID7 509 aa17.22■□□□□ 0.35
SCUBE1-202ENST00000360835 SCAND2PQ9GZW5 306 aaPredicted RBP17.22■□□□□ 0.35
SCUBE1-202ENST00000360835 SYCP1Q15431 976 aa17.22■□□□□ 0.35
SCUBE1-202ENST00000360835 GLRX3O76003 335 aaKnown RBP17.22■□□□□ 0.35
SCUBE1-202ENST00000360835 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
SCUBE1-202ENST00000360835 IL1RAPL2Q9NP60 686 aa17.22■□□□□ 0.35
SCUBE1-202ENST00000360835 KIAA0754O94854 1291 aa17.22■□□□□ 0.35
SCUBE1-202ENST00000360835 TAF3Q5VWG9 929 aa17.22■□□□□ 0.35
SCUBE1-202ENST00000360835 EXOC6BQ9Y2D4 811 aa17.22■□□□□ 0.35
SCUBE1-202ENST00000360835 MYL6BP14649 208 aa17.21■□□□□ 0.35
SCUBE1-202ENST00000360835 FKBP4Q02790 459 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCUBE1-202ENST00000360835 RALGAPBQ86X10 1494 aa17.21■□□□□ 0.35
SCUBE1-202ENST00000360835 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.34
SCUBE1-202ENST00000360835 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
SCUBE1-202ENST00000360835 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
SCUBE1-202ENST00000360835 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
SCUBE1-202ENST00000360835 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
SCUBE1-202ENST00000360835 IMMTQ16891 758 aaKnown RBP17.2■□□□□ 0.34
SCUBE1-202ENST00000360835 FAM177A1Q8N128 213 aaPredicted RBP17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 THEMISQ8N1K5 641 aaPredicted RBP17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 SFPQP23246 707 aaKnown RBP eCLIP17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 FILIP1Q7Z7B0 1213 aa17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 UBAC1Q9BSL1 405 aa17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 CEP131Q9UPN4 1083 aa17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 CFAP43Q8NDM7 1665 aa17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 MEX3CQ5U5Q3 659 aaKnown RBP17.19■□□□□ 0.34
SCUBE1-202ENST00000360835 MPHOSPH8Q99549 860 aa17.18■□□□□ 0.34
SCUBE1-202ENST00000360835 CAMK4Q16566 473 aa17.18■□□□□ 0.34
SCUBE1-202ENST00000360835 CEP126Q9P2H0 1117 aa17.18■□□□□ 0.34
SCUBE1-202ENST00000360835 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
SCUBE1-202ENST00000360835 BMP2KLQ5H9B9 411 aa17.17■□□□□ 0.34
SCUBE1-202ENST00000360835 TRIM27P14373 513 aa17.17■□□□□ 0.34
SCUBE1-202ENST00000360835 PTPRCP08575 1304 aa17.17■□□□□ 0.34
SCUBE1-202ENST00000360835 EPB41L2O43491 1005 aaKnown RBP17.17■□□□□ 0.34
SCUBE1-202ENST00000360835 TDO2P48775 406 aa17.17■□□□□ 0.34
SCUBE1-202ENST00000360835 KAT6BQ8WYB5 2073 aa17.17■□□□□ 0.34
SCUBE1-202ENST00000360835 MCM5P33992 734 aa17.17■□□□□ 0.34
SCUBE1-202ENST00000360835 PRPF40BQ6NWY9 871 aaKnown RBP17.17■□□□□ 0.34
SCUBE1-202ENST00000360835 UBXN4Q92575 508 aa17.17■□□□□ 0.34
SCUBE1-202ENST00000360835 ASXL1Q8IXJ9 1541 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms