RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 SKIDA1Q1XH10 827 aa15.34■□□□□ 0.05
NLRC3-202ENST00000359128 DEF6Q9H4E7 631 aa15.34■□□□□ 0.05
NLRC3-202ENST00000359128 TMEM87AQ8NBN3 555 aa15.34■□□□□ 0.05
NLRC3-202ENST00000359128 FMNL2Q96PY5 1086 aa15.34■□□□□ 0.05
NLRC3-202ENST00000359128 IFIT1P09914 478 aaKnown RBP15.34■□□□□ 0.05
NLRC3-202ENST00000359128 SEPT11Q9NVA2 429 aaKnown RBP15.34■□□□□ 0.05
NLRC3-202ENST00000359128 WDR78Q5VTH9 848 aa15.33■□□□□ 0.05
NLRC3-202ENST00000359128 ZNF771Q7L3S4 317 aaPredicted RBP15.33■□□□□ 0.05
NLRC3-202ENST00000359128 LUC7LQ9NQ29 371 aaKnown RBP15.33■□□□□ 0.05
NLRC3-202ENST00000359128 EXOC5O00471 708 aa15.33■□□□□ 0.04
NLRC3-202ENST00000359128 WASF1Q92558 559 aa15.33■□□□□ 0.04
NLRC3-202ENST00000359128 PDZRN3Q9UPQ7 1066 aa15.33■□□□□ 0.04
NLRC3-202ENST00000359128 HSP90B2PQ58FF3 399 aa15.33■□□□□ 0.04
NLRC3-202ENST00000359128 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.04
NLRC3-202ENST00000359128 TRIM5Q9C035 493 aa15.33■□□□□ 0.04
NLRC3-202ENST00000359128 CCP110O43303 1012 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 ERLIN2O94905 339 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 RABEP1Q15276 862 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 IMMTQ16891 758 aaKnown RBP15.32■□□□□ 0.04
NLRC3-202ENST00000359128 WDR63Q8IWG1 891 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 MKNK2Q9HBH9 465 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 BCAR3O75815 825 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 ERCC4Q92889 916 aaPredicted RBP15.32■□□□□ 0.04
NLRC3-202ENST00000359128 MYD88Q99836 296 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 AMOTQ4VCS5 1084 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
NLRC3-202ENST00000359128 CT47B1P0C2W7 299 aaPredicted RBP15.31■□□□□ 0.04
NLRC3-202ENST00000359128 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
NLRC3-202ENST00000359128 BCL11BQ9C0K0 894 aaPredicted RBP15.31■□□□□ 0.04
NLRC3-202ENST00000359128 SERPINC1P01008 464 aa15.31■□□□□ 0.04
NLRC3-202ENST00000359128 NEFHP12036 1026 aa15.31■□□□□ 0.04
NLRC3-202ENST00000359128 ANKRD18AQ8IVF6 992 aa15.31■□□□□ 0.04
NLRC3-202ENST00000359128 DCTN1Q14203 1278 aa15.31■□□□□ 0.04
NLRC3-202ENST00000359128 ME1P48163 572 aa15.3■□□□□ 0.04
NLRC3-202ENST00000359128 DAPK1P53355 1430 aa15.3■□□□□ 0.04
NLRC3-202ENST00000359128 SLC5A1P13866 664 aa15.3■□□□□ 0.04
NLRC3-202ENST00000359128 WAPLQ7Z5K2 1190 aa15.3■□□□□ 0.04
NLRC3-202ENST00000359128 USHBP1Q8N6Y0 703 aa15.3■□□□□ 0.04
NLRC3-202ENST00000359128 CUL5Q93034 780 aa15.3■□□□□ 0.04
NLRC3-202ENST00000359128 CCDC39Q9UFE4 941 aa15.3■□□□□ 0.04
NLRC3-202ENST00000359128 FCHSD2O94868 740 aa15.3■□□□□ 0.04
NLRC3-202ENST00000359128 PPM1FP49593 454 aaPredicted RBP15.3■□□□□ 0.04
NLRC3-202ENST00000359128 PPFIBP1Q86W92 1011 aa15.3■□□□□ 0.04
NLRC3-202ENST00000359128 ZRSR2Q15696 482 aaKnown RBP15.3■□□□□ 0.04
NLRC3-202ENST00000359128 PHF8Q9UPP1 1060 aa15.3■□□□□ 0.04
NLRC3-202ENST00000359128 NSD3Q9BZ95 1437 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 TSPY26PQ9H489 355 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 FIBPO43427 364 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 CWC27Q6UX04 472 aaKnown RBP15.29■□□□□ 0.04
NLRC3-202ENST00000359128 TRMT112Q9UI30 125 aaKnown RBP15.29■□□□□ 0.04
NLRC3-202ENST00000359128 KIF14Q15058 1648 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
NLRC3-202ENST00000359128 CEP57L1Q8IYX8 460 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 EHMT1Q9H9B1 1298 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 SEPT7Q16181 437 aaKnown RBP15.29■□□□□ 0.04
NLRC3-202ENST00000359128 NFE2L2Q16236 605 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 CCDC96Q2M329 555 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 BLOC1S2Q6QNY1 142 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 PDRG1Q9NUG6 133 aa15.29■□□□□ 0.04
NLRC3-202ENST00000359128 CDCA7LQ96GN5 454 aa15.28■□□□□ 0.04
NLRC3-202ENST00000359128 AMOTL2Q9Y2J4 779 aa15.28■□□□□ 0.04
NLRC3-202ENST00000359128 MINDY4BA8MYZ0 360 aa15.28■□□□□ 0.04
NLRC3-202ENST00000359128 ST5P78524 1137 aa15.28■□□□□ 0.04
NLRC3-202ENST00000359128 KRT32Q14532 448 aa15.28■□□□□ 0.04
NLRC3-202ENST00000359128 MIS18AQ9NYP9 233 aa15.28■□□□□ 0.04
NLRC3-202ENST00000359128 CEP131Q9UPN4 1083 aa15.28■□□□□ 0.04
NLRC3-202ENST00000359128 KRT28Q7Z3Y7 464 aa15.28■□□□□ 0.04
NLRC3-202ENST00000359128 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.04
NLRC3-202ENST00000359128 POTEJP0CG39 1038 aa15.27■□□□□ 0.04
NLRC3-202ENST00000359128 IFIT5Q13325 482 aaKnown RBP15.27■□□□□ 0.04
NLRC3-202ENST00000359128 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
NLRC3-202ENST00000359128 ZNF444Q8N0Y2 327 aaPredicted RBP15.27■□□□□ 0.04
NLRC3-202ENST00000359128 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.04
NLRC3-202ENST00000359128 ADGRL1O94910 1474 aa15.27■□□□□ 0.04
NLRC3-202ENST00000359128 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.03
NLRC3-202ENST00000359128 RFC4P35249 363 aa15.27■□□□□ 0.03
NLRC3-202ENST00000359128 ANKRD62A6NC57 917 aa15.27■□□□□ 0.03
NLRC3-202ENST00000359128 MBD3O95983 291 aa15.27■□□□□ 0.03
NLRC3-202ENST00000359128 PDE3AQ14432 1141 aa15.27■□□□□ 0.03
NLRC3-202ENST00000359128 AKNAQ7Z591 1439 aa15.26■□□□□ 0.03
NLRC3-202ENST00000359128 C6orf229H3BNL8 230 aa15.26■□□□□ 0.03
NLRC3-202ENST00000359128 CCDC97Q96F63 343 aaPredicted RBP15.26■□□□□ 0.03
NLRC3-202ENST00000359128 ANKRD18BA2A2Z9 1011 aa15.26■□□□□ 0.03
NLRC3-202ENST00000359128 ATF7IPQ6VMQ6 1270 aa15.26■□□□□ 0.03
NLRC3-202ENST00000359128 CCDC181Q5TID7 509 aa15.26■□□□□ 0.03
NLRC3-202ENST00000359128 JAKMIP1Q96N16 626 aaKnown RBP15.26■□□□□ 0.03
NLRC3-202ENST00000359128 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.26■□□□□ 0.03
NLRC3-202ENST00000359128 RNF214Q8ND24 703 aa15.26■□□□□ 0.03
NLRC3-202ENST00000359128 PRPF40AO75400 957 aaKnown RBP15.25■□□□□ 0.03
NLRC3-202ENST00000359128 DUSP27Q5VZP5 1158 aa15.25■□□□□ 0.03
NLRC3-202ENST00000359128 IL1RAPL2Q9NP60 686 aa15.25■□□□□ 0.03
NLRC3-202ENST00000359128 FOXO3O43524 673 aa15.25■□□□□ 0.03
NLRC3-202ENST00000359128 HSP90AA2PQ14568 343 aaPredicted RBP15.25■□□□□ 0.03
NLRC3-202ENST00000359128 LARP1BQ659C4 914 aaKnown RBP15.25■□□□□ 0.03
NLRC3-202ENST00000359128 CAVIN1Q6NZI2 390 aaKnown RBP15.25■□□□□ 0.03
NLRC3-202ENST00000359128 TNMDQ9H2S6 317 aa15.25■□□□□ 0.03
NLRC3-202ENST00000359128 CCDC141Q6ZP82 1450 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms