RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
GGPS1-202ENST00000358966 USP54Q70EL1 1684 aa16.19■□□□□ 0.18
GGPS1-202ENST00000358966 PDE3AQ14432 1141 aa16.19■□□□□ 0.18
GGPS1-202ENST00000358966 MSH6P52701 1360 aa16.19■□□□□ 0.18
GGPS1-202ENST00000358966 VAMP4O75379 141 aa16.18■□□□□ 0.18
GGPS1-202ENST00000358966 IGHDP01880 384 aa16.18■□□□□ 0.18
GGPS1-202ENST00000358966 CADPS2Q86UW7 1296 aa16.18■□□□□ 0.18
GGPS1-202ENST00000358966 FTSJ3Q8IY81 847 aaKnown RBP16.18■□□□□ 0.18
GGPS1-202ENST00000358966 LMOD3Q0VAK6 560 aa16.18■□□□□ 0.18
GGPS1-202ENST00000358966 ZKSCAN2Q63HK3 967 aa16.18■□□□□ 0.18
GGPS1-202ENST00000358966 KDM2BQ8NHM5 1336 aa16.17■□□□□ 0.18
GGPS1-202ENST00000358966 TWISTNBQ3B726 338 aaPredicted RBP16.17■□□□□ 0.18
GGPS1-202ENST00000358966 ARHGEF25Q86VW2 580 aa16.17■□□□□ 0.18
GGPS1-202ENST00000358966 KCNH5Q8NCM2 988 aa16.17■□□□□ 0.18
GGPS1-202ENST00000358966 CHRNA2Q15822 529 aa16.16■□□□□ 0.18
GGPS1-202ENST00000358966 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
GGPS1-202ENST00000358966 ITPRIPQ8IWB1 547 aa16.15■□□□□ 0.18
GGPS1-202ENST00000358966 DZIP1LQ8IYY4 767 aaKnown RBP16.15■□□□□ 0.18
GGPS1-202ENST00000358966 PCDHB15Q9Y5E8 787 aa16.15■□□□□ 0.18
GGPS1-202ENST00000358966 MED1Q15648 1581 aaPredicted RBP16.15■□□□□ 0.18
GGPS1-202ENST00000358966 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
GGPS1-202ENST00000358966 CALD1Q05682 793 aaKnown RBP16.15■□□□□ 0.18
GGPS1-202ENST00000358966 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
GGPS1-202ENST00000358966 ATF7IPQ6VMQ6 1270 aa16.14■□□□□ 0.17
GGPS1-202ENST00000358966 TMEM57Q8N5G2 664 aa16.14■□□□□ 0.17
GGPS1-202ENST00000358966 ANKRD24Q8TF21 1146 aa16.14■□□□□ 0.17
GGPS1-202ENST00000358966 KIF1AQ12756 1690 aa16.14■□□□□ 0.17
GGPS1-202ENST00000358966 USP19O94966 1318 aa16.14■□□□□ 0.17
GGPS1-202ENST00000358966 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
GGPS1-202ENST00000358966 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
GGPS1-202ENST00000358966 CRB1P82279 1406 aa16.13■□□□□ 0.17
GGPS1-202ENST00000358966 RGS3P49796 1198 aa16.12■□□□□ 0.17
GGPS1-202ENST00000358966 MVPQ14764 893 aaKnown RBP16.12■□□□□ 0.17
GGPS1-202ENST00000358966 ALS2Q96Q42 1657 aa16.12■□□□□ 0.17
GGPS1-202ENST00000358966 KIF24Q5T7B8 1368 aa16.12■□□□□ 0.17
GGPS1-202ENST00000358966 SLIT3O75094 1523 aa16.12■□□□□ 0.17
GGPS1-202ENST00000358966 CHL1O00533 1208 aa16.12■□□□□ 0.17
GGPS1-202ENST00000358966 IL17REQ8NFR9 667 aa16.12■□□□□ 0.17
GGPS1-202ENST00000358966 NPHP3Q7Z494 1330 aa16.12■□□□□ 0.17
GGPS1-202ENST00000358966 DCCP43146 1447 aa16.12■□□□□ 0.17
GGPS1-202ENST00000358966 GAS2L2Q8NHY3 880 aa16.11■□□□□ 0.17
GGPS1-202ENST00000358966 NECTIN2Q92692 538 aa16.11■□□□□ 0.17
GGPS1-202ENST00000358966 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
GGPS1-202ENST00000358966 MRPL50Q8N5N7 158 aaKnown RBP16.11■□□□□ 0.17
GGPS1-202ENST00000358966 BRPF3Q9ULD4 1205 aa16.11■□□□□ 0.17
GGPS1-202ENST00000358966 GNAT3A8MTJ3 354 aa16.1■□□□□ 0.17
GGPS1-202ENST00000358966 SLAIN2Q9P270 581 aa16.1■□□□□ 0.17
GGPS1-202ENST00000358966 LGR6Q9HBX8 967 aa16.1■□□□□ 0.17
GGPS1-202ENST00000358966 CENPQQ7L2Z9 268 aaPredicted RBP16.1■□□□□ 0.17
GGPS1-202ENST00000358966 PXDNQ92626 1479 aa16.09■□□□□ 0.17
GGPS1-202ENST00000358966 KIF16BQ96L93 1317 aa16.09■□□□□ 0.17
GGPS1-202ENST00000358966 ALDH1L2Q3SY69 923 aa16.09■□□□□ 0.17
GGPS1-202ENST00000358966 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.16
GGPS1-202ENST00000358966 C1orf115Q9H7X2 142 aa16.08■□□□□ 0.16
GGPS1-202ENST00000358966 MAP3K5Q99683 1374 aa16.08■□□□□ 0.16
GGPS1-202ENST00000358966 A0A0U1RQG5 324 aaPredicted RBP16.08■□□□□ 0.16
GGPS1-202ENST00000358966 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.16
GGPS1-202ENST00000358966 ERBB3P21860 1342 aa16.07■□□□□ 0.16
GGPS1-202ENST00000358966 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
GGPS1-202ENST00000358966 NLRP2Q9NX02 1062 aa16.07■□□□□ 0.16
GGPS1-202ENST00000358966 KIAA0232Q92628 1395 aa16.07■□□□□ 0.16
GGPS1-202ENST00000358966 ZNF530Q6P9A1 599 aaPredicted RBP16.06■□□□□ 0.16
GGPS1-202ENST00000358966 NCOA3Q9Y6Q9 1424 aa16.06■□□□□ 0.16
GGPS1-202ENST00000358966 KCNQ3O43525 872 aa16.04■□□□□ 0.16
GGPS1-202ENST00000358966 CSB-PGBD3P0DP91 1061 aa16.04■□□□□ 0.16
GGPS1-202ENST00000358966 PHRF1Q9P1Y6 1649 aaKnown RBP16.04■□□□□ 0.16
GGPS1-202ENST00000358966 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
GGPS1-202ENST00000358966 G2E3Q7L622 706 aa16.04■□□□□ 0.16
GGPS1-202ENST00000358966 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
GGPS1-202ENST00000358966 DDX19BQ9UMR2 479 aa16.02■□□□□ 0.16
GGPS1-202ENST00000358966 F6X3S4 739 aa16.01■□□□□ 0.15
GGPS1-202ENST00000358966 LRRC37A3O60309 1634 aa16.01■□□□□ 0.15
GGPS1-202ENST00000358966 PDE4AP27815 886 aa16.01■□□□□ 0.15
GGPS1-202ENST00000358966 HAP1P54257 671 aaPredicted RBP16.01■□□□□ 0.15
GGPS1-202ENST00000358966 ZNF428Q96B54 188 aa16.01■□□□□ 0.15
GGPS1-202ENST00000358966 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
GGPS1-202ENST00000358966 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
GGPS1-202ENST00000358966 TAF7Q15545 349 aaPredicted RBP16■□□□□ 0.15
GGPS1-202ENST00000358966 BRPF1P55201 1214 aaPredicted RBP15.99■□□□□ 0.15
GGPS1-202ENST00000358966 PRDM11Q9NQV5 511 aa15.99■□□□□ 0.15
GGPS1-202ENST00000358966 SOS2Q07890 1332 aaPredicted RBP15.99■□□□□ 0.15
GGPS1-202ENST00000358966 PLEKHO1Q53GL0 409 aaPredicted RBP15.99■□□□□ 0.15
GGPS1-202ENST00000358966 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
GGPS1-202ENST00000358966 MEGF6O75095 1541 aa15.98■□□□□ 0.15
GGPS1-202ENST00000358966 ABCC4O15439 1325 aa15.98■□□□□ 0.15
GGPS1-202ENST00000358966 MS4A1P11836 297 aa15.98■□□□□ 0.15
GGPS1-202ENST00000358966 IPO9Q96P70 1041 aaKnown RBP15.98■□□□□ 0.15
GGPS1-202ENST00000358966 COL18A1P39060 1754 aa15.98■□□□□ 0.15
GGPS1-202ENST00000358966 CRYBG1Q9Y4K1 1723 aa15.98■□□□□ 0.15
GGPS1-202ENST00000358966 RGS12O14924 1447 aa15.98■□□□□ 0.15
GGPS1-202ENST00000358966 EIF2S2P20042 333 aaKnown RBP15.98■□□□□ 0.15
GGPS1-202ENST00000358966 C1orf141Q5JVX7 400 aa15.98■□□□□ 0.15
GGPS1-202ENST00000358966 CEMIPQ8WUJ3 1361 aa15.97■□□□□ 0.15
GGPS1-202ENST00000358966 ZBTB7BO15156 539 aaPredicted RBP15.97■□□□□ 0.15
GGPS1-202ENST00000358966 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
GGPS1-202ENST00000358966 ANXA1P04083 346 aa15.97■□□□□ 0.15
GGPS1-202ENST00000358966 PDE4CQ08493 712 aa15.97■□□□□ 0.15
GGPS1-202ENST00000358966 SLC4A10Q6U841 1118 aa15.97■□□□□ 0.15
GGPS1-202ENST00000358966 PDZRN3Q9UPQ7 1066 aa15.97■□□□□ 0.15
GGPS1-202ENST00000358966 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms