RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 CUL5Q93034 780 aa10.39□□□□□ -0.75
CTNND1-201ENST00000358694 BCCIPQ9P287 314 aaKnown RBP eCLIP10.39□□□□□ -0.751e-6■■■■□ 21.2
CTNND1-201ENST00000358694 IFFO1Q0D2I5 559 aa10.38□□□□□ -0.75
CTNND1-201ENST00000358694 HDGFL1Q5TGJ6 251 aa10.38□□□□□ -0.75
CTNND1-201ENST00000358694 LARP1BQ659C4 914 aaKnown RBP10.38□□□□□ -0.75
CTNND1-201ENST00000358694 VPS36Q86VN1 386 aa10.38□□□□□ -0.75
CTNND1-201ENST00000358694 TSNARE1Q96NA8 513 aa10.38□□□□□ -0.75
CTNND1-201ENST00000358694 ABCF2Q9UG63 623 aa10.38□□□□□ -0.75
CTNND1-201ENST00000358694 KRT85P78386 507 aa10.38□□□□□ -0.75
CTNND1-201ENST00000358694 CTNNA3Q9UI47 895 aa10.38□□□□□ -0.75
CTNND1-201ENST00000358694 CEP131Q9UPN4 1083 aa10.38□□□□□ -0.75
CTNND1-201ENST00000358694 HMGB2P26583 209 aaKnown RBP10.37□□□□□ -0.75
CTNND1-201ENST00000358694 MAP3K9P80192 1104 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 RBM10P98175 930 aaKnown RBP10.37□□□□□ -0.75
CTNND1-201ENST00000358694 CACNA2D4Q7Z3S7 1137 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 C1orf115Q9H7X2 142 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 TRAK2O60296 914 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 IDH1O75874 414 aaKnown RBP10.37□□□□□ -0.75
CTNND1-201ENST00000358694 TNNT1P13805 278 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 MPNDQ8N594 471 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 GCOM1H8Y6P7 765 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-201ENST00000358694 MYZAPP0CAP1 466 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 FKBP15Q5T1M5 1219 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
CTNND1-201ENST00000358694 AIDAQ96BJ3 306 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 CCDC96Q2M329 555 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 ZNF354CQ86Y25 554 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 UPF3BQ9BZI7 483 aaKnown RBP10.37□□□□□ -0.75
CTNND1-201ENST00000358694 MKNK2Q9HBH9 465 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 SOGA1O94964 1423 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 SPATA32Q96LK8 384 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 CCDC85AQ96PX6 553 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-201ENST00000358694 CRACR2AQ9BSW2 395 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 SERPINA10Q9UK55 444 aa10.37□□□□□ -0.75
CTNND1-201ENST00000358694 ARL1P40616 181 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-201ENST00000358694 LUZP1Q86V48 1076 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 RGS22Q8NE09 1264 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 CEP126Q9P2H0 1117 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 MYO15BQ96JP2 1530 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 IMMTQ16891 758 aaKnown RBP10.36□□□□□ -0.75
CTNND1-201ENST00000358694 AACSQ86V21 672 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 SMTNL1A8MU46 457 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 TICAM2Q86XR7 235 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 SHTN1A0MZ66 631 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 MTHFSP49914 203 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 DNA2P51530 1060 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 TMCO3Q6UWJ1 677 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 FERMT1Q9BQL6 677 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 EHMT1Q9H9B1 1298 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 PDS5BQ9NTI5 1447 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 SLC4A2P04920 1241 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 ZNF219Q9P2Y4 722 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-201ENST00000358694 USP47Q96K76 1375 aa10.36□□□□□ -0.75
CTNND1-201ENST00000358694 GRM1Q13255 1194 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 TRMT1LQ7Z2T5 733 aaKnown RBP10.35□□□□□ -0.75
CTNND1-201ENST00000358694 ZWINTO95229 277 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 LMAN1P49257 510 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 CBX1P83916 185 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 TWISTNBQ3B726 338 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-201ENST00000358694 RAB3IL1Q8TBN0 382 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 VTI1AQ96AJ9 217 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 ANKIB1Q9P2G1 1089 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 ZPR1O75312 459 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 AAMPQ13685 434 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 ZNF530Q6P9A1 599 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-201ENST00000358694 BLOC1S2Q6QNY1 142 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 SRCIN1Q9C0H9 1055 aa10.35□□□□□ -0.75
CTNND1-201ENST00000358694 WDR33Q9C0J8 1336 aaKnown RBP10.34□□□□□ -0.75
CTNND1-201ENST00000358694 CFAP100Q494V2 611 aa10.34□□□□□ -0.75
CTNND1-201ENST00000358694 PNISRQ8TF01 805 aaKnown RBP10.34□□□□□ -0.75
CTNND1-201ENST00000358694 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.34□□□□□ -0.757e-6■□□□□ 8.3
CTNND1-201ENST00000358694 PDRG1Q9NUG6 133 aa10.34□□□□□ -0.75
CTNND1-201ENST00000358694 FILIP1Q7Z7B0 1213 aa10.34□□□□□ -0.75
CTNND1-201ENST00000358694 CFAP57Q96MR6 1250 aa10.34□□□□□ -0.75
CTNND1-201ENST00000358694 ZBED9Q6R2W3 1325 aa10.34□□□□□ -0.75
CTNND1-201ENST00000358694 CAVIN4Q5BKX8 364 aa10.34□□□□□ -0.75
CTNND1-201ENST00000358694 PUF60Q9UHX1 559 aaKnown RBP10.34□□□□□ -0.75
CTNND1-201ENST00000358694 MINDY4BA8MYZ0 360 aa10.34□□□□□ -0.75
CTNND1-201ENST00000358694 BMS1Q14692 1282 aaKnown RBP10.34□□□□□ -0.75
CTNND1-201ENST00000358694 PRKRIP1Q9H875 184 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-201ENST00000358694 PRDM11Q9NQV5 511 aa10.34□□□□□ -0.75
CTNND1-201ENST00000358694 TXNDC2Q86VQ3 553 aa10.33□□□□□ -0.76
CTNND1-201ENST00000358694 ERICH4A6NGS2 130 aa10.33□□□□□ -0.76
CTNND1-201ENST00000358694 PRKAR2BP31323 418 aa10.33□□□□□ -0.76
CTNND1-201ENST00000358694 TMEM266Q2M3C6 531 aa10.33□□□□□ -0.76
CTNND1-201ENST00000358694 LRSAM1Q6UWE0 723 aa10.33□□□□□ -0.76
CTNND1-201ENST00000358694 DZIP1Q86YF9 867 aaKnown RBP10.33□□□□□ -0.76
CTNND1-201ENST00000358694 CCT4P50991 539 aaKnown RBP10.32□□□□□ -0.76
CTNND1-201ENST00000358694 PPP1R14CQ8TAE6 165 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 LRRC45Q96CN5 670 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 RAB34Q9BZG1 259 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 TMCO5BA8MYB1 307 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 CETN1Q12798 172 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 JAKMIP1Q96N16 626 aaKnown RBP10.32□□□□□ -0.76
CTNND1-201ENST00000358694 GBP3Q9H0R5 595 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 TAOK3Q9H2K8 898 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 ZNF652Q9Y2D9 606 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 FSD2A1L4K1 749 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 KLHL10Q6JEL2 608 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms