RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 BRPF1P55201 1214 aaPredicted RBP20.17■□□□□ 0.82
PTPN5-201ENST00000358540 USP19O94966 1318 aa20.17■□□□□ 0.82
PTPN5-201ENST00000358540 CHL1O00533 1208 aa20.17■□□□□ 0.82
PTPN5-201ENST00000358540 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
PTPN5-201ENST00000358540 LNPKQ9C0E8 428 aa20.16■□□□□ 0.82
PTPN5-201ENST00000358540 FRAT2O75474 233 aaPredicted RBP20.16■□□□□ 0.82
PTPN5-201ENST00000358540 IGSF1Q8N6C5 1336 aa20.14■□□□□ 0.82
PTPN5-201ENST00000358540 SMC5Q8IY18 1101 aa20.14■□□□□ 0.82
PTPN5-201ENST00000358540 ARHGAP45Q92619 1136 aa20.14■□□□□ 0.81
PTPN5-201ENST00000358540 RGPD1P0DJD0 1748 aa20.14■□□□□ 0.81
PTPN5-201ENST00000358540 FMN2Q9NZ56 1722 aa20.14■□□□□ 0.81
PTPN5-201ENST00000358540 ABCC4O15439 1325 aa20.14■□□□□ 0.81
PTPN5-201ENST00000358540 PSME1Q06323 249 aa20.13■□□□□ 0.81
PTPN5-201ENST00000358540 TSPYL4Q9UJ04 414 aa20.13■□□□□ 0.81
PTPN5-201ENST00000358540 LMOD2Q6P5Q4 547 aa20.13■□□□□ 0.81
PTPN5-201ENST00000358540 ORAI2Q96SN7 254 aa20.13■□□□□ 0.81
PTPN5-201ENST00000358540 FAM43AQ8N2R8 423 aa20.12■□□□□ 0.81
PTPN5-201ENST00000358540 API5Q9BZZ5 524 aaKnown RBP20.12■□□□□ 0.81
PTPN5-201ENST00000358540 CRB1P82279 1406 aa20.12■□□□□ 0.81
PTPN5-201ENST00000358540 KDRP35968 1356 aa20.1■□□□□ 0.81
PTPN5-201ENST00000358540 SIRT2Q8IXJ6 389 aa20.1■□□□□ 0.81
PTPN5-201ENST00000358540 NECTIN2Q92692 538 aa20.1■□□□□ 0.81
PTPN5-201ENST00000358540 ANKRD45Q5TZF3 282 aa20.09■□□□□ 0.81
PTPN5-201ENST00000358540 GAS2L2Q8NHY3 880 aa20.09■□□□□ 0.81
PTPN5-201ENST00000358540 SLC4A2P04920 1241 aa20.09■□□□□ 0.81
PTPN5-201ENST00000358540 CHD2O14647 1828 aaKnown RBP20.08■□□□□ 0.81
PTPN5-201ENST00000358540 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.81
PTPN5-201ENST00000358540 NUCB1Q02818 461 aa20.08■□□□□ 0.8
PTPN5-201ENST00000358540 G2E3Q7L622 706 aa20.07■□□□□ 0.8
PTPN5-201ENST00000358540 CHD1LQ86WJ1 897 aa20.07■□□□□ 0.8
PTPN5-201ENST00000358540 ADGRL3Q9HAR2 1447 aa20.07■□□□□ 0.8
PTPN5-201ENST00000358540 MFAP1P55081 439 aaKnown RBP20.07■□□□□ 0.8
PTPN5-201ENST00000358540 ADAMTSL3P82987 1691 aa20.06■□□□□ 0.8
PTPN5-201ENST00000358540 MARF1Q9Y4F3 1742 aaKnown RBP20.05■□□□□ 0.8
PTPN5-201ENST00000358540 F6X3S4 739 aa20.05■□□□□ 0.8
PTPN5-201ENST00000358540 VIRMAQ69YN4 1812 aaKnown RBP20.05■□□□□ 0.8
PTPN5-201ENST00000358540 SETD1BQ9UPS6 1966 aaKnown RBP20.05■□□□□ 0.8
PTPN5-201ENST00000358540 GNAT3A8MTJ3 354 aa20.05■□□□□ 0.8
PTPN5-201ENST00000358540 LRRC59Q96AG4 307 aaKnown RBP20.05■□□□□ 0.8
PTPN5-201ENST00000358540 UPF2Q9HAU5 1272 aaKnown RBP20.05■□□□□ 0.8
PTPN5-201ENST00000358540 SLC4A10Q6U841 1118 aa20.05■□□□□ 0.8
PTPN5-201ENST00000358540 PKNOX2Q96KN3 472 aa20.05■□□□□ 0.8
PTPN5-201ENST00000358540 KIAA0232Q92628 1395 aa20.04■□□□□ 0.8
PTPN5-201ENST00000358540 NBPF6Q5VWK0 638 aa20.04■□□□□ 0.8
PTPN5-201ENST00000358540 PROSER2Q86WR7 435 aaPredicted RBP20.04■□□□□ 0.8
PTPN5-201ENST00000358540 IL17REQ8NFR9 667 aa20.04■□□□□ 0.8
PTPN5-201ENST00000358540 NBPF4Q96M43 638 aa20.04■□□□□ 0.8
PTPN5-201ENST00000358540 ZNF142P52746 1687 aaPredicted RBP20.03■□□□□ 0.8
PTPN5-201ENST00000358540 RGS12O14924 1447 aa20.03■□□□□ 0.8
PTPN5-201ENST00000358540 MSH6P52701 1360 aa20.02■□□□□ 0.8
PTPN5-201ENST00000358540 CHMP4BQ9H444 224 aaKnown RBP20.02■□□□□ 0.8
PTPN5-201ENST00000358540 NWD1Q149M9 1564 aa20.02■□□□□ 0.8
PTPN5-201ENST00000358540 APBB1O00213 710 aa20.02■□□□□ 0.79
PTPN5-201ENST00000358540 MEIS3Q99687 375 aa20.02■□□□□ 0.79
PTPN5-201ENST00000358540 IP6K1Q92551 441 aa20.01■□□□□ 0.79
PTPN5-201ENST00000358540 HAP1P54257 671 aaPredicted RBP20.01■□□□□ 0.79
PTPN5-201ENST00000358540 TBC1D32Q96NH3 1257 aa20.01■□□□□ 0.79
PTPN5-201ENST00000358540 INTS3Q68E01 1043 aaKnown RBP20■□□□□ 0.79
PTPN5-201ENST00000358540 MAP3K5Q99683 1374 aa19.99■□□□□ 0.79
PTPN5-201ENST00000358540 GCC1Q96CN9 775 aa19.99■□□□□ 0.79
PTPN5-201ENST00000358540 DDX17Q92841 729 aaKnown RBP19.98■□□□□ 0.79
PTPN5-201ENST00000358540 KIF24Q5T7B8 1368 aa19.98■□□□□ 0.79
PTPN5-201ENST00000358540 GCP02774 474 aa19.97■□□□□ 0.79
PTPN5-201ENST00000358540 PTPRCP08575 1304 aa19.97■□□□□ 0.79
PTPN5-201ENST00000358540 LGR6Q9HBX8 967 aa19.97■□□□□ 0.79
PTPN5-201ENST00000358540 STK31Q9BXU1 1019 aa19.96■□□□□ 0.79
PTPN5-201ENST00000358540 SLKQ9H2G2 1235 aaPredicted RBP19.96■□□□□ 0.79
PTPN5-201ENST00000358540 RRAGDQ9NQL2 400 aaPredicted RBP19.96■□□□□ 0.79
PTPN5-201ENST00000358540 LTN1O94822 1766 aa19.96■□□□□ 0.79
PTPN5-201ENST00000358540 C22orf23Q9BZE7 217 aa19.96■□□□□ 0.79
PTPN5-201ENST00000358540 NFAT5O94916 1531 aa19.95■□□□□ 0.78
PTPN5-201ENST00000358540 C16orf71Q8IYS4 520 aaPredicted RBP19.95■□□□□ 0.78
PTPN5-201ENST00000358540 SPRYD3Q8NCJ5 442 aa19.95■□□□□ 0.78
PTPN5-201ENST00000358540 KCNH5Q8NCM2 988 aa19.95■□□□□ 0.78
PTPN5-201ENST00000358540 RTL1A6NKG5 1358 aa19.95■□□□□ 0.78
PTPN5-201ENST00000358540 FKBP5Q13451 457 aaPredicted RBP19.95■□□□□ 0.78
PTPN5-201ENST00000358540 TAF7Q15545 349 aaPredicted RBP19.95■□□□□ 0.78
PTPN5-201ENST00000358540 ARXQ96QS3 562 aa19.95■□□□□ 0.78
PTPN5-201ENST00000358540 HTATSF1O43719 755 aaKnown RBP19.94■□□□□ 0.78
PTPN5-201ENST00000358540 CEP85Q6P2H3 762 aa19.94■□□□□ 0.78
PTPN5-201ENST00000358540 KRT28Q7Z3Y7 464 aa19.94■□□□□ 0.78
PTPN5-201ENST00000358540 GLIPR1L2Q4G1C9 344 aa19.94■□□□□ 0.78
PTPN5-201ENST00000358540 SMARCA5O60264 1052 aaPredicted RBP19.93■□□□□ 0.78
PTPN5-201ENST00000358540 ATP10DQ9P241 1426 aa19.93■□□□□ 0.78
PTPN5-201ENST00000358540 ZC3H6P61129 1189 aaKnown RBP19.93■□□□□ 0.78
PTPN5-201ENST00000358540 FLIIQ13045 1269 aa19.93■□□□□ 0.78
PTPN5-201ENST00000358540 ANKRD44Q8N8A2 993 aa19.93■□□□□ 0.78
PTPN5-201ENST00000358540 OTUD7AQ8TE49 926 aaPredicted RBP19.93■□□□□ 0.78
PTPN5-201ENST00000358540 EIF2S2P20042 333 aaKnown RBP19.92■□□□□ 0.78
PTPN5-201ENST00000358540 BECN1Q14457 450 aa19.92■□□□□ 0.78
PTPN5-201ENST00000358540 MPRIPQ6WCQ1 1025 aa19.92■□□□□ 0.78
PTPN5-201ENST00000358540 AXIN2Q9Y2T1 843 aa19.92■□□□□ 0.78
PTPN5-201ENST00000358540 KCNQ3O43525 872 aa19.92■□□□□ 0.78
PTPN5-201ENST00000358540 ZNF530Q6P9A1 599 aaPredicted RBP19.92■□□□□ 0.78
PTPN5-201ENST00000358540 DCTPP1Q9H773 170 aa19.91■□□□□ 0.78
PTPN5-201ENST00000358540 HSPA2P54652 639 aa19.91■□□□□ 0.78
PTPN5-201ENST00000358540 CCDC30Q5VVM6 783 aa19.91■□□□□ 0.78
PTPN5-201ENST00000358540 ARHGEF25Q86VW2 580 aa19.91■□□□□ 0.78
PTPN5-201ENST00000358540 VSIG10Q8N0Z9 540 aa19.91■□□□□ 0.78
PTPN5-201ENST00000358540 TBC1D2Q9BYX2 928 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms