RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ANKRD44Q8N8A2 993 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 ARHGAP45Q92619 1136 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 NUDT16Q96DE0 195 aaKnown RBP7.97□□□□□ -1.13
CSDE1-203ENST00000358528 LRRCC1Q9C099 1032 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 USP25Q9UHP3 1055 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 CHAF1AQ13111 956 aaPredicted RBP7.96□□□□□ -1.13
CSDE1-203ENST00000358528 CEP85Q6P2H3 762 aa7.96□□□□□ -1.13
CSDE1-203ENST00000358528 CCDC9Q9Y3X0 531 aaKnown RBP7.96□□□□□ -1.13
CSDE1-203ENST00000358528 IQGAP1P46940 1657 aa7.96□□□□□ -1.13
CSDE1-203ENST00000358528 SBNO2Q9Y2G9 1366 aa7.96□□□□□ -1.13
CSDE1-203ENST00000358528 FAM177BA6PVY3 158 aa7.96□□□□□ -1.14
CSDE1-203ENST00000358528 CSPP1Q1MSJ5 1256 aa7.96□□□□□ -1.14
CSDE1-203ENST00000358528 NPATQ14207 1427 aa7.96□□□□□ -1.14
CSDE1-203ENST00000358528 FOXO3O43524 673 aa7.96□□□□□ -1.14
CSDE1-203ENST00000358528 FGD1P98174 961 aa7.96□□□□□ -1.14
CSDE1-203ENST00000358528 G2E3Q7L622 706 aa7.96□□□□□ -1.14
CSDE1-203ENST00000358528 PDCL3Q9H2J4 239 aa7.96□□□□□ -1.14
CSDE1-203ENST00000358528 TMEM63CQ9P1W3 806 aa7.96□□□□□ -1.14
CSDE1-203ENST00000358528 SMC3Q9UQE7 1217 aa7.96□□□□□ -1.14
CSDE1-203ENST00000358528 SPHKAPQ2M3C7 1700 aa7.96□□□□□ -1.14
CSDE1-203ENST00000358528 ABCA6Q8N139 1617 aa7.95□□□□□ -1.14
CSDE1-203ENST00000358528 OFD1O75665 1012 aa7.95□□□□□ -1.14
CSDE1-203ENST00000358528 PDE1AP54750 535 aa7.95□□□□□ -1.14
CSDE1-203ENST00000358528 HSP90AB2PQ58FF8 381 aa7.95□□□□□ -1.14
CSDE1-203ENST00000358528 MAP3K4Q9Y6R4 1608 aa7.95□□□□□ -1.14
CSDE1-203ENST00000358528 AK9Q5TCS8 1911 aa7.95□□□□□ -1.14
CSDE1-203ENST00000358528 UBTFL1P0CB47 393 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-203ENST00000358528 MX1P20591 662 aa7.95□□□□□ -1.14
CSDE1-203ENST00000358528 NSFL1CQ9UNZ2 370 aaKnown RBP7.95□□□□□ -1.14
CSDE1-203ENST00000358528 ZMYM3Q14202 1370 aa7.95□□□□□ -1.14
CSDE1-203ENST00000358528 RNF17Q9BXT8 1623 aaKnown RBP7.94□□□□□ -1.14
CSDE1-203ENST00000358528 FOSBP53539 338 aa7.94□□□□□ -1.14
CSDE1-203ENST00000358528 LRSAM1Q6UWE0 723 aa7.94□□□□□ -1.14
CSDE1-203ENST00000358528 CWC27Q6UX04 472 aaKnown RBP7.94□□□□□ -1.14
CSDE1-203ENST00000358528 GPT2Q8TD30 523 aa7.94□□□□□ -1.14
CSDE1-203ENST00000358528 DIAPH3Q9NSV4 1193 aa7.94□□□□□ -1.14
CSDE1-203ENST00000358528 C17orf53Q8N3J3 647 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-203ENST00000358528 TSC1Q92574 1164 aa7.94□□□□□ -1.14
CSDE1-203ENST00000358528 MSH6P52701 1360 aa7.94□□□□□ -1.14
CSDE1-203ENST00000358528 TTC12Q9H892 705 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-203ENST00000358528 LRRFIP2Q9Y608 721 aaKnown RBP7.94□□□□□ -1.14
CSDE1-203ENST00000358528 CEP152O94986 1710 aa7.94□□□□□ -1.14
CSDE1-203ENST00000358528 ASXL2Q76L83 1435 aa7.94□□□□□ -1.14
CSDE1-203ENST00000358528 KIF1BO60333 1816 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-203ENST00000358528 FERMT3Q86UX7 667 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 CCDC61Q9Y6R9 512 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 ZFYVE16Q7Z3T8 1539 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 IL13P35225 146 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 CYB5RLQ6IPT4 315 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 FBXW7Q969H0 707 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 SPG7Q9UQ90 795 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 ZKSCAN5Q9Y2L8 839 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 MYOM2P54296 1465 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 GNAI3P08754 354 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 ABCC4O15439 1325 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 WASLO00401 505 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-203ENST00000358528 GADD45BO75293 160 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-203ENST00000358528 CPA1P15085 419 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 CCT4P50991 539 aaKnown RBP7.93□□□□□ -1.14
CSDE1-203ENST00000358528 ZNF592Q92610 1267 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 PALD1Q9ULE6 856 aa7.93□□□□□ -1.14
CSDE1-203ENST00000358528 IQSEC2Q5JU85 1478 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 MCM2P49736 904 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 ZNF445P59923 1031 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 EIF4A2Q14240 407 aaKnown RBP7.92□□□□□ -1.14
CSDE1-203ENST00000358528 USP48Q86UV5 1035 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 PPP1R9BQ96SB3 815 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 CNPY2Q9Y2B0 182 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 MYOM1P52179 1685 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 WDR33Q9C0J8 1336 aaKnown RBP7.92□□□□□ -1.14
CSDE1-203ENST00000358528 CCDC83Q8IWF9 413 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 ESYT1Q9BSJ8 1104 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 TET3O43151 1660 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 SRGAP3O43295 1099 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 CAMK4Q16566 473 aa7.92□□□□□ -1.14
CSDE1-203ENST00000358528 ANXA1P04083 346 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 STK3Q13188 491 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 HDGFL1Q5TGJ6 251 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 CCDC30Q5VVM6 783 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 GIMAP6Q6P9H5 292 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 SLC26A8Q96RN1 970 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 ZCCHC11Q5TAX3 1644 aaKnown RBP7.91□□□□□ -1.14
CSDE1-203ENST00000358528 CBX1P83916 185 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 PUS7Q96PZ0 661 aaKnown RBP7.91□□□□□ -1.14
CSDE1-203ENST00000358528 ZHX1Q9UKY1 873 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-203ENST00000358528 NOL7Q9UMY1 257 aaKnown RBP7.91□□□□□ -1.14
CSDE1-203ENST00000358528 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.91□□□□□ -1.142e-8■■□□□ 11.7
CSDE1-203ENST00000358528 CHD1O14646 1710 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 ADCY5O95622 1261 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 HSP90B1P14625 803 aaKnown RBP7.91□□□□□ -1.14
CSDE1-203ENST00000358528 CASTP20810 708 aaKnown RBP7.91□□□□□ -1.14
CSDE1-203ENST00000358528 NLRP6P59044 892 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 SASS6Q6UVJ0 657 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 USHBP1Q8N6Y0 703 aa7.91□□□□□ -1.14
CSDE1-203ENST00000358528 C9orf78Q9NZ63 289 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-203ENST00000358528 YTHDC2Q9H6S0 1430 aaKnown RBP7.91□□□□□ -1.14
CSDE1-203ENST00000358528 DDIT3P35638 169 aa7.9□□□□□ -1.14
CSDE1-203ENST00000358528 FLIIQ13045 1269 aa7.9□□□□□ -1.14
CSDE1-203ENST00000358528 JAKMIP1Q96N16 626 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms