RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 LUC7LQ9NQ29 371 aaKnown RBP6.8□□□□□ -1.32
BRCA1-203ENST00000357654 KIAA1328Q86T90 577 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 MPHOSPH6Q99547 160 aaKnown RBP6.8□□□□□ -1.32
BRCA1-203ENST00000357654 ZKSCAN2Q63HK3 967 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 ODF2LQ9ULJ1 636 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 BAZ1BQ9UIG0 1483 aaKnown RBP6.8□□□□□ -1.32
BRCA1-203ENST00000357654 RIOK3O14730 519 aaKnown RBP6.8□□□□□ -1.32
BRCA1-203ENST00000357654 PPP1R12BO60237 982 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-203ENST00000357654 RALBP1Q15311 655 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 AKNAD1Q5T1N1 836 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 SURF6O75683 361 aaKnown RBP6.79□□□□□ -1.32
BRCA1-203ENST00000357654 PDIA4P13667 645 aaKnown RBP6.79□□□□□ -1.32
BRCA1-203ENST00000357654 PSMA5P28066 241 aa6.79□□□□□ -1.32
BRCA1-203ENST00000357654 EIF5P55010 431 aaKnown RBP6.79□□□□□ -1.32
BRCA1-203ENST00000357654 NOL7Q9UMY1 257 aaKnown RBP6.79□□□□□ -1.32
BRCA1-203ENST00000357654 GIMAP7Q8NHV1 300 aa6.79□□□□□ -1.32
BRCA1-203ENST00000357654 ANKRD18BA2A2Z9 1011 aa6.79□□□□□ -1.32
BRCA1-203ENST00000357654 KINO60870 393 aaKnown RBP6.79□□□□□ -1.32
BRCA1-203ENST00000357654 RABEP1Q15276 862 aa6.79□□□□□ -1.32
BRCA1-203ENST00000357654 WAPLQ7Z5K2 1190 aa6.79□□□□□ -1.32
BRCA1-203ENST00000357654 CCDC89Q8N998 374 aa6.79□□□□□ -1.32
BRCA1-203ENST00000357654 TTC36A6NLP5 189 aa6.79□□□□□ -1.32
BRCA1-203ENST00000357654 PLEKHO1Q53GL0 409 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-203ENST00000357654 TMX1Q9H3N1 280 aa6.79□□□□□ -1.32
BRCA1-203ENST00000357654 LEKR1Q6ZMV7 388 aa6.79□□□□□ -1.32
BRCA1-203ENST00000357654 SMG6Q86US8 1419 aaKnown RBP6.79□□□□□ -1.32
BRCA1-203ENST00000357654 LMOD1P29536 600 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-203ENST00000357654 SEPT6Q14141 434 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 MPNDQ8N594 471 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 VEZTQ9HBM0 779 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 IRAK4Q9NWZ3 460 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 POLD1P28340 1107 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 GJC1P36383 396 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 SLC26A8Q96RN1 970 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 ZC3H6P61129 1189 aaKnown RBP6.78□□□□□ -1.32
BRCA1-203ENST00000357654 GABPAQ06546 454 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 MAPK8IP2Q13387 824 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-203ENST00000357654 EAPPQ56P03 285 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-203ENST00000357654 SYCP3Q8IZU3 236 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 PPP1R14CQ8TAE6 165 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 PFDN4Q9NQP4 134 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 SP4Q02446 784 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 SATB1Q01826 763 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 CFAP58Q5T655 872 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 CEP57L1Q8IYX8 460 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 TTC30BQ8N4P2 665 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 BANK1Q8NDB2 785 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 MROH2BQ7Z745 1585 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 ST20-MTHFSA0A0A6YYL1 179 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 PTCD1O75127 700 aaKnown RBP6.78□□□□□ -1.32
BRCA1-203ENST00000357654 MTHFSP49914 203 aa6.78□□□□□ -1.32
BRCA1-203ENST00000357654 PRC1O43663 620 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 CCDC82Q8N4S0 544 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 EHMT1Q9H9B1 1298 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 PRKG1Q13976 671 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 MPRIPQ6WCQ1 1025 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 CABP2Q9NPB3 220 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 NOC2LQ9Y3T9 749 aaKnown RBP6.77□□□□□ -1.33
BRCA1-203ENST00000357654 CAVIN4Q5BKX8 364 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 INTS3Q68E01 1043 aaKnown RBP6.77□□□□□ -1.33
BRCA1-203ENST00000357654 PPP1R9BQ96SB3 815 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 LNPKQ9C0E8 428 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 TPD52P55327 224 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-203ENST00000357654 XRCC6P12956 609 aaKnown RBP eCLIP6.77□□□□□ -1.33
BRCA1-203ENST00000357654 PRPF4BQ13523 1007 aaKnown RBP6.77□□□□□ -1.33
BRCA1-203ENST00000357654 CENPQQ7L2Z9 268 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-203ENST00000357654 PANK3Q9H999 370 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 ME1P48163 572 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 PIP4K2AP48426 406 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-203ENST00000357654 PPP2R5CQ13362 524 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 TXNDC2Q86VQ3 553 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 ZNF444Q8N0Y2 327 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-203ENST00000357654 LRRC45Q96CN5 670 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 CFAP57Q96MR6 1250 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 ALS2CR12Q96Q35 445 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 SPG7Q9UQ90 795 aa6.77□□□□□ -1.33
BRCA1-203ENST00000357654 VGFO15240 615 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-203ENST00000357654 C1orf115Q9H7X2 142 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 PPME1Q9Y570 386 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 STK24Q9Y6E0 443 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 SNX16P57768 344 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 CUL4BQ13620 913 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 ZNF396Q96N95 335 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-203ENST00000357654 FERMT1Q9BQL6 677 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 CWC15Q9P013 229 aaKnown RBP6.76□□□□□ -1.33
BRCA1-203ENST00000357654 MRVI1Q9Y6F6 885 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 CARMIL2Q6F5E8 1435 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 NACA2Q9H009 215 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 ZBTB21Q9ULJ3 1066 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 CEP83Q9Y592 693 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 PHACTR2O75167 634 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 RBM25P49756 843 aaKnown RBP6.76□□□□□ -1.33
BRCA1-203ENST00000357654 AIDAQ96BJ3 306 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 GTPBP4Q9BZE4 634 aaKnown RBP6.76□□□□□ -1.33
BRCA1-203ENST00000357654 RANBP6O60518 1105 aaKnown RBP6.76□□□□□ -1.33
BRCA1-203ENST00000357654 TCERG1LQ5VWI1 586 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 GGNBP2Q9H3C7 697 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 ZNF652Q9Y2D9 606 aa6.76□□□□□ -1.33
BRCA1-203ENST00000357654 SKIV2LQ15477 1246 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms