RNA–Protein interactions for RNA: ENST00000357632.6

CCR9-202, Transcript of C-C motif chemokine receptor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR9, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-202ENST00000357632 RGPD5Q99666 1765 aa13.34□□□□□ -0.27
CCR9-202ENST00000357632 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
CCR9-202ENST00000357632 ANKRD24Q8TF21 1146 aa13.34□□□□□ -0.27
CCR9-202ENST00000357632 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
CCR9-202ENST00000357632 CHMP4AQ9BY43 222 aa13.34□□□□□ -0.27
CCR9-202ENST00000357632 CHMP4BQ9H444 224 aaKnown RBP13.34□□□□□ -0.27
CCR9-202ENST00000357632 SMC4Q9NTJ3 1288 aa13.34□□□□□ -0.27
CCR9-202ENST00000357632 NBPF6Q5VWK0 638 aa13.33□□□□□ -0.27
CCR9-202ENST00000357632 LTV1Q96GA3 475 aaPredicted RBP13.33□□□□□ -0.27
CCR9-202ENST00000357632 NBPF4Q96M43 638 aa13.33□□□□□ -0.27
CCR9-202ENST00000357632 ERBB3P21860 1342 aa13.33□□□□□ -0.28
CCR9-202ENST00000357632 LTBP4Q8N2S1 1624 aa13.33□□□□□ -0.28
CCR9-202ENST00000357632 LAS1LQ9Y4W2 734 aaKnown RBP13.33□□□□□ -0.28
CCR9-202ENST00000357632 ABCA3Q99758 1704 aa13.33□□□□□ -0.28
CCR9-202ENST00000357632 VAMP4O75379 141 aa13.32□□□□□ -0.28
CCR9-202ENST00000357632 AHDC1Q5TGY3 1603 aaPredicted RBP13.32□□□□□ -0.28
CCR9-202ENST00000357632 TWISTNBQ3B726 338 aaPredicted RBP13.31□□□□□ -0.28
CCR9-202ENST00000357632 C20orf194Q5TEA3 1177 aa13.31□□□□□ -0.28
CCR9-202ENST00000357632 SSH1Q8WYL5 1049 aa13.31□□□□□ -0.28
CCR9-202ENST00000357632 CACNA1FO60840 1977 aa13.31□□□□□ -0.28
CCR9-202ENST00000357632 FAM83GA6ND36 823 aa13.31□□□□□ -0.28
CCR9-202ENST00000357632 AKAP4Q5JQC9 854 aa13.31□□□□□ -0.28
CCR9-202ENST00000357632 DZIP1LQ8IYY4 767 aaKnown RBP13.31□□□□□ -0.28
CCR9-202ENST00000357632 FRAT1Q92837 279 aaPredicted RBP13.31□□□□□ -0.28
CCR9-202ENST00000357632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCR9-202ENST00000357632 ATF7IPQ6VMQ6 1270 aa13.3□□□□□ -0.28
CCR9-202ENST00000357632 THUMPD2Q9BTF0 503 aaKnown RBP13.3□□□□□ -0.28
CCR9-202ENST00000357632 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
CCR9-202ENST00000357632 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
CCR9-202ENST00000357632 CEMIPQ8WUJ3 1361 aa13.3□□□□□ -0.28
CCR9-202ENST00000357632 MCM10Q7L590 875 aa13.29□□□□□ -0.28
CCR9-202ENST00000357632 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
CCR9-202ENST00000357632 ADAMTS7Q9UKP4 1686 aa13.29□□□□□ -0.28
CCR9-202ENST00000357632 ZC3H6P61129 1189 aaKnown RBP13.29□□□□□ -0.28
CCR9-202ENST00000357632 VIRMAQ69YN4 1812 aaKnown RBP13.29□□□□□ -0.28
CCR9-202ENST00000357632 COL22A1Q8NFW1 1626 aaPredicted RBP13.29□□□□□ -0.28
CCR9-202ENST00000357632 DCTN1Q14203 1278 aa13.28□□□□□ -0.28
CCR9-202ENST00000357632 TAF7Q15545 349 aaPredicted RBP13.28□□□□□ -0.28
CCR9-202ENST00000357632 DDX17Q92841 729 aaKnown RBP13.28□□□□□ -0.28
CCR9-202ENST00000357632 DDX19BQ9UMR2 479 aa13.28□□□□□ -0.28
CCR9-202ENST00000357632 MVPQ14764 893 aaKnown RBP13.28□□□□□ -0.28
CCR9-202ENST00000357632 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
CCR9-202ENST00000357632 CLUAP1Q96AJ1 413 aa13.28□□□□□ -0.28
CCR9-202ENST00000357632 C1orf141Q5JVX7 400 aa13.27□□□□□ -0.28
CCR9-202ENST00000357632 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.28
CCR9-202ENST00000357632 TSPYL4Q9UJ04 414 aa13.27□□□□□ -0.28
CCR9-202ENST00000357632 AXIN2Q9Y2T1 843 aa13.27□□□□□ -0.28
CCR9-202ENST00000357632 ROBO1Q9Y6N7 1651 aa13.27□□□□□ -0.28
CCR9-202ENST00000357632 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
CCR9-202ENST00000357632 LRRC59Q96AG4 307 aaKnown RBP13.27□□□□□ -0.29
CCR9-202ENST00000357632 PKD1L3Q7Z443 1732 aa13.27□□□□□ -0.29
CCR9-202ENST00000357632 PARP4Q9UKK3 1724 aaKnown RBP13.27□□□□□ -0.29
CCR9-202ENST00000357632 KDM3BQ7LBC6 1761 aa13.27□□□□□ -0.29
CCR9-202ENST00000357632 TATP17735 454 aaPredicted RBP13.27□□□□□ -0.29
CCR9-202ENST00000357632 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
CCR9-202ENST00000357632 NOB1Q9ULX3 412 aaKnown RBP13.26□□□□□ -0.29
CCR9-202ENST00000357632 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
CCR9-202ENST00000357632 PTPRCP08575 1304 aa13.26□□□□□ -0.29
CCR9-202ENST00000357632 HOXB7P09629 217 aa13.26□□□□□ -0.29
CCR9-202ENST00000357632 TRIM27P14373 513 aa13.26□□□□□ -0.29
CCR9-202ENST00000357632 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
CCR9-202ENST00000357632 C8orf58Q8NAV2 365 aa13.26□□□□□ -0.29
CCR9-202ENST00000357632 BCL2L13Q9BXK5 485 aa13.26□□□□□ -0.29
CCR9-202ENST00000357632 COG6Q9Y2V7 657 aa13.26□□□□□ -0.29
CCR9-202ENST00000357632 KDM2BQ8NHM5 1336 aa13.25□□□□□ -0.29
CCR9-202ENST00000357632 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
CCR9-202ENST00000357632 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
CCR9-202ENST00000357632 CSB-PGBD3P0DP91 1061 aa13.24□□□□□ -0.29
CCR9-202ENST00000357632 TSPYL6Q8N831 410 aa13.24□□□□□ -0.29
CCR9-202ENST00000357632 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
CCR9-202ENST00000357632 NLRP2Q9NX02 1062 aa13.24□□□□□ -0.29
CCR9-202ENST00000357632 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
CCR9-202ENST00000357632 SCN11AQ9UI33 1791 aa13.24□□□□□ -0.29
CCR9-202ENST00000357632 WDR17Q8IZU2 1322 aa13.24□□□□□ -0.29
CCR9-202ENST00000357632 TCERG1O14776 1098 aaKnown RBP13.24□□□□□ -0.29
CCR9-202ENST00000357632 HSP90AB1P08238 724 aaKnown RBP13.24□□□□□ -0.29
CCR9-202ENST00000357632 COL14A1Q05707 1796 aaKnown RBP13.23□□□□□ -0.29
CCR9-202ENST00000357632 TEFQ10587 303 aa13.23□□□□□ -0.29
CCR9-202ENST00000357632 CABLES1Q8TDN4 633 aa13.23□□□□□ -0.29
CCR9-202ENST00000357632 COL5A2P05997 1499 aaPredicted RBP13.22□□□□□ -0.29
CCR9-202ENST00000357632 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
CCR9-202ENST00000357632 ABCC4O15439 1325 aa13.22□□□□□ -0.29
CCR9-202ENST00000357632 RLBP1P12271 317 aa13.22□□□□□ -0.29
CCR9-202ENST00000357632 CCDC30Q5VVM6 783 aa13.22□□□□□ -0.29
CCR9-202ENST00000357632 RWDD1Q9H446 243 aaPredicted RBP13.21□□□□□ -0.29
CCR9-202ENST00000357632 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.3
CCR9-202ENST00000357632 STK31Q9BXU1 1019 aa13.21□□□□□ -0.3
CCR9-202ENST00000357632 TOM1O60784 492 aa13.2□□□□□ -0.3
CCR9-202ENST00000357632 CARD10Q9BWT7 1032 aa13.2□□□□□ -0.3
CCR9-202ENST00000357632 PHLPP1O60346 1717 aa13.2□□□□□ -0.3
CCR9-202ENST00000357632 TSHZ2Q9NRE2 1034 aa13.2□□□□□ -0.3
CCR9-202ENST00000357632 MRC1P22897 1456 aa13.19□□□□□ -0.3
CCR9-202ENST00000357632 ELL2O00472 640 aaPredicted RBP13.19□□□□□ -0.3
CCR9-202ENST00000357632 CHRNA2Q15822 529 aa13.19□□□□□ -0.3
CCR9-202ENST00000357632 ITPRIPQ8IWB1 547 aa13.19□□□□□ -0.3
CCR9-202ENST00000357632 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
CCR9-202ENST00000357632 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
CCR9-202ENST00000357632 MEGF6O75095 1541 aa13.19□□□□□ -0.3
CCR9-202ENST00000357632 N4BP2Q86UW6 1770 aaPredicted RBP13.18□□□□□ -0.3
CCR9-202ENST00000357632 PHKG2P15735 406 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms