RNA–Protein interactions for RNA: ENST00000357428.5

USP33-201, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 5 BASIC

Gene USP33, Length 4,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-201ENST00000357428 TAF7Q15545 349 aaPredicted RBP4.48□□□□□ -1.69
USP33-201ENST00000357428 MTHFSDQ2M296 383 aaKnown RBP4.48□□□□□ -1.69
USP33-201ENST00000357428 RPAP2Q8IXW5 612 aaPredicted RBP4.48□□□□□ -1.69
USP33-201ENST00000357428 LRRCC1Q9C099 1032 aa4.48□□□□□ -1.69
USP33-201ENST00000357428 GOLGA6L4A6NEF3 574 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 MAP4K4O95819 1239 aaPredicted RBP4.47□□□□□ -1.69
USP33-201ENST00000357428 HSP90B1P14625 803 aaKnown RBP4.47□□□□□ -1.69
USP33-201ENST00000357428 MYL6BP14649 208 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 PTMSP20962 102 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 HSP90AB4PQ58FF6 505 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 TBX22Q9Y458 520 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 DDX49Q9Y6V7 483 aaKnown RBP4.47□□□□□ -1.69
USP33-201ENST00000357428 SRGAP3O43295 1099 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 FLIIQ13045 1269 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 HDAC1Q13547 482 aaPredicted RBP4.47□□□□□ -1.69
USP33-201ENST00000357428 PRDM11Q9NQV5 511 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 ANXA1P04083 346 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 CLASRPQ8N2M8 674 aaKnown RBP4.47□□□□□ -1.69
USP33-201ENST00000357428 EYA1Q99502 592 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 MEIS3Q99687 375 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 MROH2AA6NES4 1674 aa4.47□□□□□ -1.69
USP33-201ENST00000357428 TOM1L2Q6ZVM7 507 aa4.46□□□□□ -1.69
USP33-201ENST00000357428 KRT28Q7Z3Y7 464 aa4.46□□□□□ -1.69
USP33-201ENST00000357428 TRMT2AQ8IZ69 625 aaKnown RBP4.46□□□□□ -1.69
USP33-201ENST00000357428 RUFY2Q8WXA3 655 aa4.46□□□□□ -1.69
USP33-201ENST00000357428 SIL1Q9H173 461 aa4.46□□□□□ -1.69
USP33-201ENST00000357428 SETBP1Q9Y6X0 1596 aa4.46□□□□□ -1.69
USP33-201ENST00000357428 PTPRCP08575 1304 aa4.46□□□□□ -1.69
USP33-201ENST00000357428 TULP4Q9NRJ4 1543 aa4.46□□□□□ -1.69
USP33-201ENST00000357428 ROBO2Q9HCK4 1378 aa4.46□□□□□ -1.69
USP33-201ENST00000357428 ERC2O15083 957 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 DDX54Q8TDD1 881 aaKnown RBP4.46□□□□□ -1.7
USP33-201ENST00000357428 ARHGAP45Q92619 1136 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 LRRC59Q96AG4 307 aaKnown RBP4.46□□□□□ -1.7
USP33-201ENST00000357428 LRRFIP2Q9Y608 721 aaKnown RBP4.46□□□□□ -1.7
USP33-201ENST00000357428 A2ML1A8K2U0 1454 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 ALKQ9UM73 1620 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 SEC24BO95487 1268 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 NEK4P51957 841 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 CABP4P57796 275 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 NUCB1Q02818 461 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 RABEP1Q15276 862 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 NUTM1Q86Y26 1132 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 NAP1L5Q96NT1 182 aaPredicted RBP4.46□□□□□ -1.7
USP33-201ENST00000357428 PLEKHF1Q96S99 279 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 TBC1D2Q9BYX2 928 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 ZBTB40Q9NUA8 1239 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 SPG7Q9UQ90 795 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 ATP7BP35670 1465 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 PRR36Q9H6K5 1346 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 HOXC9P31274 260 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 ZRSR1Q15695 479 aaKnown RBP4.46□□□□□ -1.7
USP33-201ENST00000357428 TSHZ3Q63HK5 1081 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 CNTROBQ8N137 903 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 ANKRD24Q8TF21 1146 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 TBC1D32Q96NH3 1257 aa4.46□□□□□ -1.7
USP33-201ENST00000357428 DEPDC5O75140 1603 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 NEXMIFQ5QGS0 1516 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 CHRNA2Q15822 529 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 TBC1D9Q6ZT07 1266 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 NEUROD6Q96NK8 337 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 FSD1Q9BTV5 496 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 CLTCQ00610 1675 aaKnown RBP4.45□□□□□ -1.7
USP33-201ENST00000357428 K7ELQ4 463 aaPredicted RBP4.45□□□□□ -1.7
USP33-201ENST00000357428 ZKSCAN1P17029 563 aaPredicted RBP4.45□□□□□ -1.7
USP33-201ENST00000357428 MX1P20591 662 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 BMP2KLQ5H9B9 411 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 MCTP1Q6DN14 999 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 SBNO1A3KN83 1393 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 FAM135BQ49AJ0 1406 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 KIAA1210Q9ULL0 1709 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 PLEKHG3A1L390 1219 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 AMOTQ4VCS5 1084 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 DNAAF4Q8WXU2 420 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 MSH6P52701 1360 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 PIK3R4Q99570 1358 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 VWDEQ8N2E2 1590 aa4.45□□□□□ -1.7
USP33-201ENST00000357428 RIMBP3CA6NJZ7 1639 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 RIMBP3BA6NNM3 1639 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 PIK3C2BO00750 1634 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 RIMBP3Q9UFD9 1639 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 TRAK2O60296 914 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 NUCB2P80303 420 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 DNTTIP2Q5QJE6 756 aaKnown RBP4.44□□□□□ -1.7
USP33-201ENST00000357428 AACSQ86V21 672 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 SMC5Q8IY18 1101 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 SYAP1Q96A49 352 aaPredicted RBP4.44□□□□□ -1.7
USP33-201ENST00000357428 RBM42Q9BTD8 480 aaKnown RBP4.44□□□□□ -1.7
USP33-201ENST00000357428 PLEKHG1Q9ULL1 1385 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 FRMPD1Q5SYB0 1578 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 PI4KAP2A4QPH2 592 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 SKOR2Q2VWA4 1001 aaPredicted RBP4.44□□□□□ -1.7
USP33-201ENST00000357428 G2E3Q7L622 706 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 C16orf71Q8IYS4 520 aaPredicted RBP4.44□□□□□ -1.7
USP33-201ENST00000357428 PI4KAP1Q8N8J0 262 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 DNAJC2Q99543 621 aaKnown RBP4.44□□□□□ -1.7
USP33-201ENST00000357428 CHPF2Q9P2E5 772 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 MAP3K5Q99683 1374 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 MROH1Q8NDA8 1641 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 ZC3H13Q5T200 1668 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms