RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 RGPD4Q7Z3J3 1758 aa14.24□□□□□ -0.13
LINC01560-201ENST00000357412 INSRP06213 1382 aa14.23□□□□□ -0.13
LINC01560-201ENST00000357412 RAPGEF4Q8WZA2 1011 aa14.23□□□□□ -0.13
LINC01560-201ENST00000357412 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
LINC01560-201ENST00000357412 TATP17735 454 aaPredicted RBP14.22□□□□□ -0.13
LINC01560-201ENST00000357412 ARXQ96QS3 562 aa14.22□□□□□ -0.13
LINC01560-201ENST00000357412 EMILIN1Q9Y6C2 1016 aa14.22□□□□□ -0.13
LINC01560-201ENST00000357412 FLT4P35916 1363 aa14.22□□□□□ -0.13
LINC01560-201ENST00000357412 KIF24Q5T7B8 1368 aa14.22□□□□□ -0.13
LINC01560-201ENST00000357412 PNPLA7Q6ZV29 1317 aa14.21□□□□□ -0.13
LINC01560-201ENST00000357412 PCGF6Q9BYE7 350 aa14.21□□□□□ -0.13
LINC01560-201ENST00000357412 SMG6Q86US8 1419 aaKnown RBP14.21□□□□□ -0.13
LINC01560-201ENST00000357412 NSD3Q9BZ95 1437 aa14.21□□□□□ -0.13
LINC01560-201ENST00000357412 WNK3Q9BYP7 1800 aa14.2□□□□□ -0.14
LINC01560-201ENST00000357412 UTRNP46939 3433 aa14.2□□□□□ -0.14
LINC01560-201ENST00000357412 SLC16A10Q8TF71 515 aa14.2□□□□□ -0.14
LINC01560-201ENST00000357412 TFCP2L1Q9NZI6 479 aa14.2□□□□□ -0.14
LINC01560-201ENST00000357412 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
LINC01560-201ENST00000357412 CASZ1Q86V15 1759 aa14.19□□□□□ -0.14
LINC01560-201ENST00000357412 RGPD5Q99666 1765 aa14.19□□□□□ -0.14
LINC01560-201ENST00000357412 CYP27B1O15528 508 aa14.19□□□□□ -0.14
LINC01560-201ENST00000357412 CCNL1Q9UK58 526 aaPredicted RBP14.19□□□□□ -0.14
LINC01560-201ENST00000357412 SBF2Q86WG5 1849 aa14.19□□□□□ -0.14
LINC01560-201ENST00000357412 PAPPAQ13219 1627 aa14.18□□□□□ -0.14
LINC01560-201ENST00000357412 WASHC2AQ641Q2 1341 aa14.17□□□□□ -0.14
LINC01560-201ENST00000357412 PCDH11XQ9BZA7 1347 aa14.17□□□□□ -0.14
LINC01560-201ENST00000357412 PCDH11YQ9BZA8 1340 aa14.17□□□□□ -0.14
LINC01560-201ENST00000357412 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
LINC01560-201ENST00000357412 POLKQ9UBT6 870 aa14.17□□□□□ -0.14
LINC01560-201ENST00000357412 MAP3K5Q99683 1374 aa14.17□□□□□ -0.14
LINC01560-201ENST00000357412 FAM208AQ9UK61 1670 aaKnown RBP14.15□□□□□ -0.14
LINC01560-201ENST00000357412 POLD1P28340 1107 aa14.15□□□□□ -0.14
LINC01560-201ENST00000357412 MPRIPQ6WCQ1 1025 aa14.15□□□□□ -0.14
LINC01560-201ENST00000357412 COL23A1Q86Y22 540 aaPredicted RBP14.15□□□□□ -0.14
LINC01560-201ENST00000357412 EYA1Q99502 592 aa14.15□□□□□ -0.14
LINC01560-201ENST00000357412 LTN1O94822 1766 aa14.14□□□□□ -0.15
LINC01560-201ENST00000357412 NKX1-1Q15270 411 aaPredicted RBP14.14□□□□□ -0.15
LINC01560-201ENST00000357412 POLR3GLQ9BT43 218 aa14.14□□□□□ -0.15
LINC01560-201ENST00000357412 NCAPD2Q15021 1401 aa14.14□□□□□ -0.15
LINC01560-201ENST00000357412 PALLDQ8WX93 1383 aa14.13□□□□□ -0.15
LINC01560-201ENST00000357412 HSPA5P11021 654 aaKnown RBP14.13□□□□□ -0.15
LINC01560-201ENST00000357412 PIGBQ92521 554 aa14.13□□□□□ -0.15
LINC01560-201ENST00000357412 EIF4G2P78344 907 aaKnown RBP eCLIP14.12□□□□□ -0.15
LINC01560-201ENST00000357412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.12□□□□□ -0.15
LINC01560-201ENST00000357412 MYOM1P52179 1685 aa14.11□□□□□ -0.15
LINC01560-201ENST00000357412 TNNT2P45379 298 aaPredicted RBP14.11□□□□□ -0.15
LINC01560-201ENST00000357412 EIF4A2Q14240 407 aaKnown RBP14.11□□□□□ -0.15
LINC01560-201ENST00000357412 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
LINC01560-201ENST00000357412 ZNF784Q8NCA9 323 aaPredicted RBP14.11□□□□□ -0.15
LINC01560-201ENST00000357412 SMARCC1Q92922 1105 aaPredicted RBP14.11□□□□□ -0.15
LINC01560-201ENST00000357412 PANK3Q9H999 370 aa14.11□□□□□ -0.15
LINC01560-201ENST00000357412 SPG7Q9UQ90 795 aa14.11□□□□□ -0.15
LINC01560-201ENST00000357412 MSH5O43196 834 aa14.1□□□□□ -0.15
LINC01560-201ENST00000357412 NLGN2Q8NFZ4 835 aa14.1□□□□□ -0.15
LINC01560-201ENST00000357412 BTAF1O14981 1849 aa14.09□□□□□ -0.15
LINC01560-201ENST00000357412 PHKG2P15735 406 aa14.09□□□□□ -0.15
LINC01560-201ENST00000357412 HMGB2P26583 209 aaKnown RBP14.09□□□□□ -0.15
LINC01560-201ENST00000357412 GPR162Q16538 588 aa14.09□□□□□ -0.15
LINC01560-201ENST00000357412 MSL1Q68DK7 614 aa14.09□□□□□ -0.15
LINC01560-201ENST00000357412 AMIGO3Q86WK7 504 aa14.09□□□□□ -0.15
LINC01560-201ENST00000357412 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
LINC01560-201ENST00000357412 IFNL2Q8IZJ0 200 aa14.08□□□□□ -0.16
LINC01560-201ENST00000357412 FLAD1Q8NFF5 587 aa14.08□□□□□ -0.16
LINC01560-201ENST00000357412 LOC102724428A0A0B4J2F2 783 aa14.07□□□□□ -0.16
LINC01560-201ENST00000357412 KCNA4P22459 653 aa14.07□□□□□ -0.16
LINC01560-201ENST00000357412 SIK1P57059 783 aa14.07□□□□□ -0.16
LINC01560-201ENST00000357412 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
LINC01560-201ENST00000357412 SMIM5Q71RC9 77 aa14.06□□□□□ -0.16
LINC01560-201ENST00000357412 TMOD3Q9NYL9 352 aa14.06□□□□□ -0.16
LINC01560-201ENST00000357412 ASAP1Q9ULH1 1129 aa14.06□□□□□ -0.16
LINC01560-201ENST00000357412 IGSF1Q8N6C5 1336 aa14.06□□□□□ -0.16
LINC01560-201ENST00000357412 LINC00116Q8NCU8 138 aa14.05□□□□□ -0.16
LINC01560-201ENST00000357412 AK7Q96M32 723 aa14.05□□□□□ -0.16
LINC01560-201ENST00000357412 ATG3Q9NT62 314 aa14.05□□□□□ -0.16
LINC01560-201ENST00000357412 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.04□□□□□ -0.16
LINC01560-201ENST00000357412 ITPK1Q13572 414 aa14.04□□□□□ -0.16
LINC01560-201ENST00000357412 PELP1Q8IZL8 1130 aaKnown RBP14.04□□□□□ -0.16
LINC01560-201ENST00000357412 PLEKHG2Q9H7P9 1386 aa14.04□□□□□ -0.16
LINC01560-201ENST00000357412 PHF14O94880 888 aa14.03□□□□□ -0.16
LINC01560-201ENST00000357412 YBX3P16989 372 aaKnown RBP eCLIP14.03□□□□□ -0.16
LINC01560-201ENST00000357412 MORC1Q86VD1 984 aa14.03□□□□□ -0.16
LINC01560-201ENST00000357412 CD2APQ9Y5K6 639 aa14.03□□□□□ -0.16
LINC01560-201ENST00000357412 DOT1LQ8TEK3 1739 aa14.02□□□□□ -0.16
LINC01560-201ENST00000357412 SHANK3Q9BYB0 1731 aa14.02□□□□□ -0.16
LINC01560-201ENST00000357412 SSFA2P28290 1259 aa14.02□□□□□ -0.17
LINC01560-201ENST00000357412 ATP6V1AP38606 617 aa14.02□□□□□ -0.17
LINC01560-201ENST00000357412 GOLGB1Q14789 3259 aaKnown RBP14.01□□□□□ -0.17
LINC01560-201ENST00000357412 ERVV-2B6SEH9 535 aa14.01□□□□□ -0.17
LINC01560-201ENST00000357412 GRIN3BO60391 1043 aa14.01□□□□□ -0.17
LINC01560-201ENST00000357412 PLEKHO1Q53GL0 409 aaPredicted RBP14.01□□□□□ -0.17
LINC01560-201ENST00000357412 AEBP1Q8IUX7 1158 aa14.01□□□□□ -0.17
LINC01560-201ENST00000357412 DCAF5Q96JK2 942 aa14.01□□□□□ -0.17
LINC01560-201ENST00000357412 SLC4A9Q96Q91 983 aa14.01□□□□□ -0.17
LINC01560-201ENST00000357412 AMOTQ4VCS5 1084 aa14□□□□□ -0.17
LINC01560-201ENST00000357412 AMER1Q5JTC6 1135 aaPredicted RBP14□□□□□ -0.17
LINC01560-201ENST00000357412 KNSTRNQ9Y448 316 aa14□□□□□ -0.17
LINC01560-201ENST00000357412 GNPATO15228 680 aa13.99□□□□□ -0.17
LINC01560-201ENST00000357412 HSP90AB1P08238 724 aaKnown RBP13.99□□□□□ -0.17
LINC01560-201ENST00000357412 IL13P35225 146 aa13.99□□□□□ -0.17
LINC01560-201ENST00000357412 ZNF530Q6P9A1 599 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms