RNA–Protein interactions for RNA: ENST00000357028.6

MED27-202, Transcript of mediator complex subunit 27, humanhuman

TSL 1 (best) BASIC

Gene MED27, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED27-202ENST00000357028 USHBP1Q8N6Y0 703 aa17.47■□□□□ 0.39
MED27-202ENST00000357028 KAT6BQ8WYB5 2073 aa17.46■□□□□ 0.39
MED27-202ENST00000357028 TNNT2P45379 298 aaPredicted RBP17.46■□□□□ 0.39
MED27-202ENST00000357028 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.39
MED27-202ENST00000357028 ANKRD26Q9UPS8 1709 aa17.46■□□□□ 0.39
MED27-202ENST00000357028 MEGF6O75095 1541 aa17.46■□□□□ 0.39
MED27-202ENST00000357028 NCAPD2Q15021 1401 aa17.46■□□□□ 0.39
MED27-202ENST00000357028 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
MED27-202ENST00000357028 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
MED27-202ENST00000357028 RREB1Q92766 1687 aa17.45■□□□□ 0.38
MED27-202ENST00000357028 EYA1Q99502 592 aa17.45■□□□□ 0.38
MED27-202ENST00000357028 TXNRD1Q16881 649 aa17.44■□□□□ 0.38
MED27-202ENST00000357028 EIF4A2Q14240 407 aaKnown RBP17.43■□□□□ 0.38
MED27-202ENST00000357028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.43■□□□□ 0.38
MED27-202ENST00000357028 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
MED27-202ENST00000357028 NUP188Q5SRE5 1749 aa17.41■□□□□ 0.38
MED27-202ENST00000357028 PRIM1P49642 420 aaKnown RBP17.41■□□□□ 0.38
MED27-202ENST00000357028 PCDH11XQ9BZA7 1347 aa17.41■□□□□ 0.38
MED27-202ENST00000357028 PCDH11YQ9BZA8 1340 aa17.41■□□□□ 0.38
MED27-202ENST00000357028 PLEKHG2Q9H7P9 1386 aa17.4■□□□□ 0.38
MED27-202ENST00000357028 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
MED27-202ENST00000357028 CYP27B1O15528 508 aa17.39■□□□□ 0.37
MED27-202ENST00000357028 NKX1-1Q15270 411 aaPredicted RBP17.39■□□□□ 0.37
MED27-202ENST00000357028 SPG7Q9UQ90 795 aa17.39■□□□□ 0.37
MED27-202ENST00000357028 IGSF1Q8N6C5 1336 aa17.38■□□□□ 0.37
MED27-202ENST00000357028 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
MED27-202ENST00000357028 SLC27A3Q5K4L6 730 aa17.37■□□□□ 0.37
MED27-202ENST00000357028 ANO8Q9HCE9 1232 aaPredicted RBP17.37■□□□□ 0.37
MED27-202ENST00000357028 SLC15A2Q16348 729 aa17.36■□□□□ 0.37
MED27-202ENST00000357028 SYTL4Q96C24 671 aaPredicted RBP17.36■□□□□ 0.37
MED27-202ENST00000357028 BTAF1O14981 1849 aa17.35■□□□□ 0.37
MED27-202ENST00000357028 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
MED27-202ENST00000357028 STK32BQ9NY57 414 aa17.35■□□□□ 0.37
MED27-202ENST00000357028 LRP5O75197 1615 aa17.35■□□□□ 0.37
MED27-202ENST00000357028 IL13P35225 146 aa17.34■□□□□ 0.37
MED27-202ENST00000357028 MTHFSP49914 203 aa17.34■□□□□ 0.37
MED27-202ENST00000357028 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.36
MED27-202ENST00000357028 IFNL2Q8IZJ0 200 aa17.33■□□□□ 0.36
MED27-202ENST00000357028 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
MED27-202ENST00000357028 PKD1L3Q7Z443 1732 aa17.32■□□□□ 0.36
MED27-202ENST00000357028 PHKG2P15735 406 aa17.31■□□□□ 0.36
MED27-202ENST00000357028 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
MED27-202ENST00000357028 PLEKHO1Q53GL0 409 aaPredicted RBP17.31■□□□□ 0.36
MED27-202ENST00000357028 SPON1Q9HCB6 807 aa17.31■□□□□ 0.36
MED27-202ENST00000357028 AKT1S1Q96B36 256 aa17.3■□□□□ 0.36
MED27-202ENST00000357028 KDRP35968 1356 aa17.29■□□□□ 0.36
MED27-202ENST00000357028 MPRIPQ6WCQ1 1025 aa17.29■□□□□ 0.36
MED27-202ENST00000357028 DOT1LQ8TEK3 1739 aa17.29■□□□□ 0.36
MED27-202ENST00000357028 HSP90AB1P08238 724 aaKnown RBP17.28■□□□□ 0.36
MED27-202ENST00000357028 SULT6B1Q6IMI4 303 aa17.28■□□□□ 0.36
MED27-202ENST00000357028 PIGBQ92521 554 aa17.28■□□□□ 0.36
MED27-202ENST00000357028 SMARCC1Q92922 1105 aaPredicted RBP17.28■□□□□ 0.36
MED27-202ENST00000357028 AEBP1Q8IUX7 1158 aa17.27■□□□□ 0.36
MED27-202ENST00000357028 PDGFDQ9GZP0 370 aaPredicted RBP17.27■□□□□ 0.36
MED27-202ENST00000357028 PAPPAQ13219 1627 aa17.26■□□□□ 0.35
MED27-202ENST00000357028 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
MED27-202ENST00000357028 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
MED27-202ENST00000357028 ZNF827Q17R98 1081 aa17.26■□□□□ 0.35
MED27-202ENST00000357028 DCAF5Q96JK2 942 aa17.26■□□□□ 0.35
MED27-202ENST00000357028 CCNL1Q9UK58 526 aaPredicted RBP17.26■□□□□ 0.35
MED27-202ENST00000357028 LY75O60449 1722 aa17.25■□□□□ 0.35
MED27-202ENST00000357028 KCNQ4P56696 695 aa17.24■□□□□ 0.35
MED27-202ENST00000357028 MTFR1LQ9H019 292 aa17.24■□□□□ 0.35
MED27-202ENST00000357028 TMOD3Q9NYL9 352 aa17.24■□□□□ 0.35
MED27-202ENST00000357028 CASZ1Q86V15 1759 aa17.24■□□□□ 0.35
MED27-202ENST00000357028 ZNF530Q6P9A1 599 aaPredicted RBP17.23■□□□□ 0.35
MED27-202ENST00000357028 SLC16A10Q8TF71 515 aa17.23■□□□□ 0.35
MED27-202ENST00000357028 PALLDQ8WX93 1383 aa17.23■□□□□ 0.35
MED27-202ENST00000357028 ITGB4P16144 1822 aa17.23■□□□□ 0.35
MED27-202ENST00000357028 ZBTB7AO95365 584 aa17.22■□□□□ 0.35
MED27-202ENST00000357028 PTGER2P43116 358 aa17.22■□□□□ 0.35
MED27-202ENST00000357028 TFCP2L1Q9NZI6 479 aa17.22■□□□□ 0.35
MED27-202ENST00000357028 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
MED27-202ENST00000357028 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
MED27-202ENST00000357028 SGIP1Q9BQI5 828 aa17.2■□□□□ 0.34
MED27-202ENST00000357028 ATG3Q9NT62 314 aa17.2■□□□□ 0.34
MED27-202ENST00000357028 ASAP1Q9ULH1 1129 aa17.2■□□□□ 0.34
MED27-202ENST00000357028 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
MED27-202ENST00000357028 PNPLA7Q6ZV29 1317 aa17.2■□□□□ 0.34
MED27-202ENST00000357028 LOC102724428A0A0B4J2F2 783 aa17.19■□□□□ 0.34
MED27-202ENST00000357028 HMOX1P09601 288 aa17.19■□□□□ 0.34
MED27-202ENST00000357028 SIK1P57059 783 aa17.19■□□□□ 0.34
MED27-202ENST00000357028 CNGB1Q14028 1251 aaPredicted RBP17.19■□□□□ 0.34
MED27-202ENST00000357028 AKAP4Q5JQC9 854 aa17.19■□□□□ 0.34
MED27-202ENST00000357028 PPP1R1BQ9UD71 204 aaPredicted RBP17.19■□□□□ 0.34
MED27-202ENST00000357028 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
MED27-202ENST00000357028 CABP4P57796 275 aa17.18■□□□□ 0.34
MED27-202ENST00000357028 CFAP53Q96M91 514 aa17.18■□□□□ 0.34
MED27-202ENST00000357028 COL3A1P02461 1466 aaPredicted RBP17.18■□□□□ 0.34
MED27-202ENST00000357028 QSER1Q2KHR3 1735 aa17.17■□□□□ 0.34
MED27-202ENST00000357028 FLAD1Q8NFF5 587 aa17.17■□□□□ 0.34
MED27-202ENST00000357028 KDM6AO15550 1401 aaPredicted RBP17.16■□□□□ 0.34
MED27-202ENST00000357028 MTHFSDQ2M296 383 aaKnown RBP17.15■□□□□ 0.34
MED27-202ENST00000357028 COL23A1Q86Y22 540 aaPredicted RBP17.15■□□□□ 0.34
MED27-202ENST00000357028 NFATC2IPQ8NCF5 419 aa17.15■□□□□ 0.34
MED27-202ENST00000357028 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
MED27-202ENST00000357028 ATP6V1AP38606 617 aa17.14■□□□□ 0.33
MED27-202ENST00000357028 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
MED27-202ENST00000357028 TAF1LQ8IZX4 1826 aa17.13■□□□□ 0.33
MED27-202ENST00000357028 RNMTO43148 476 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms