RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 KRT24Q2M2I5 525 aa15.08■□□□□ 0
BDNF-202ENST00000356660 RPAP2Q8IXW5 612 aaPredicted RBP15.08■□□□□ 0
BDNF-202ENST00000356660 CDK19Q9BWU1 502 aa15.07■□□□□ 0
BDNF-202ENST00000356660 TRPM1Q7Z4N2 1603 aa15.07■□□□□ 0
BDNF-202ENST00000356660 TRIM5Q9C035 493 aa15.07■□□□□ 0
BDNF-202ENST00000356660 SULT6B1Q6IMI4 303 aa15.06■□□□□ 0
BDNF-202ENST00000356660 MCM10Q7L590 875 aa15.06■□□□□ 0
BDNF-202ENST00000356660 MEIS3Q99687 375 aa15.06■□□□□ 0
BDNF-202ENST00000356660 PSME1Q06323 249 aa15.06■□□□□ 0
BDNF-202ENST00000356660 C14orf93Q9H972 538 aaKnown RBP15.06■□□□□ 0
BDNF-202ENST00000356660 IL16Q14005 1332 aa15.05■□□□□ 0
BDNF-202ENST00000356660 GIMAP6Q6P9H5 292 aa15.05■□□□□ 0
BDNF-202ENST00000356660 JARID2Q92833 1246 aaPredicted RBP15.05■□□□□ 0
BDNF-202ENST00000356660 NSFL1CQ9UNZ2 370 aaKnown RBP15.05■□□□□ 0
BDNF-202ENST00000356660 ZMYM3Q14202 1370 aa15.05■□□□□ -0
BDNF-202ENST00000356660 CAMK4Q16566 473 aa15.05■□□□□ -0
BDNF-202ENST00000356660 USP48Q86UV5 1035 aa15.05■□□□□ -0
BDNF-202ENST00000356660 FERMT3Q86UX7 667 aa15.05■□□□□ -0
BDNF-202ENST00000356660 BICD2Q8TD16 824 aa15.05■□□□□ -0
BDNF-202ENST00000356660 C9orf78Q9NZ63 289 aaPredicted RBP15.05■□□□□ -0
BDNF-202ENST00000356660 FAM184AQ8NB25 1140 aa15.04■□□□□ -0
BDNF-202ENST00000356660 ZNF500O60304 480 aaPredicted RBP15.04■□□□□ -0
BDNF-202ENST00000356660 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
BDNF-202ENST00000356660 KIF2CQ99661 725 aa15.04■□□□□ -0
BDNF-202ENST00000356660 TRAPPC8Q9Y2L5 1435 aa15.04■□□□□ -0
BDNF-202ENST00000356660 GOLGA6L19H0YKK7 550 aa15.04■□□□□ -0
BDNF-202ENST00000356660 SURF6O75683 361 aaKnown RBP15.04■□□□□ -0
BDNF-202ENST00000356660 CCDC94Q9BW85 323 aaPredicted RBP15.04■□□□□ -0
BDNF-202ENST00000356660 LRRCC1Q9C099 1032 aa15.04■□□□□ -0
BDNF-202ENST00000356660 FOSBP53539 338 aa15.03■□□□□ -0
BDNF-202ENST00000356660 TPD52L1Q16890 204 aaPredicted RBP15.03■□□□□ -0
BDNF-202ENST00000356660 DCTPP1Q9H773 170 aa15.03■□□□□ -0
BDNF-202ENST00000356660 AIMP1Q12904 312 aaKnown RBP15.03■□□□□ -0
BDNF-202ENST00000356660 PTPRTO14522 1441 aa15.03■□□□□ -0
BDNF-202ENST00000356660 GADD45BO75293 160 aaPredicted RBP15.03■□□□□ -0
BDNF-202ENST00000356660 GNAI2P04899 355 aa15.03■□□□□ -0
BDNF-202ENST00000356660 CNPY2Q9Y2B0 182 aa15.03■□□□□ -0
BDNF-202ENST00000356660 C1orf141Q5JVX7 400 aa15.02■□□□□ -0
BDNF-202ENST00000356660 CCDC183Q5T5S1 534 aa15.02■□□□□ -0
BDNF-202ENST00000356660 PBRM1Q86U86 1689 aa15.02■□□□□ -0
BDNF-202ENST00000356660 NUTM1Q86Y26 1132 aa15.02■□□□□ -0
BDNF-202ENST00000356660 C16orf45Q96MC5 204 aaPredicted RBP15.02■□□□□ -0
BDNF-202ENST00000356660 ABCC10Q5T3U5 1492 aa15.02■□□□□ -0
BDNF-202ENST00000356660 NLRP1Q9C000 1473 aa15.02■□□□□ -0
BDNF-202ENST00000356660 BECN2A8MW95 431 aa15.02■□□□□ -0
BDNF-202ENST00000356660 HSP90B1P14625 803 aaKnown RBP15.02■□□□□ -0
BDNF-202ENST00000356660 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.02■□□□□ -0
BDNF-202ENST00000356660 TERF1P54274 439 aa15.01□□□□□ -0.01
BDNF-202ENST00000356660 SMAP1Q8IYB5 467 aaPredicted RBP15.01□□□□□ -0.01
BDNF-202ENST00000356660 GNL2Q13823 731 aaKnown RBP15.01□□□□□ -0.01
BDNF-202ENST00000356660 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
BDNF-202ENST00000356660 DUOX2Q9NRD8 1548 aa15.01□□□□□ -0.01
BDNF-202ENST00000356660 ERVK-7P63135 1459 aa15.01□□□□□ -0.01
BDNF-202ENST00000356660 VGLL3A8MV65 326 aa15.01□□□□□ -0.01
BDNF-202ENST00000356660 CCDC192P0DO97 292 aa15.01□□□□□ -0.01
BDNF-202ENST00000356660 SIRT2Q8IXJ6 389 aa15.01□□□□□ -0.01
BDNF-202ENST00000356660 ANKRD44Q8N8A2 993 aa15.01□□□□□ -0.01
BDNF-202ENST00000356660 PRIMPOLQ96LW4 560 aa15.01□□□□□ -0.01
BDNF-202ENST00000356660 CGNQ9P2M7 1197 aaKnown RBP15.01□□□□□ -0.01
BDNF-202ENST00000356660 LETM1O95202 739 aaPredicted RBP15□□□□□ -0.01
BDNF-202ENST00000356660 MX1P20591 662 aa15□□□□□ -0.01
BDNF-202ENST00000356660 CWC27Q6UX04 472 aaKnown RBP15□□□□□ -0.01
BDNF-202ENST00000356660 CCDC83Q8IWF9 413 aa15□□□□□ -0.01
BDNF-202ENST00000356660 PATL2C9JE40 543 aaKnown RBP15□□□□□ -0.01
BDNF-202ENST00000356660 NME9Q86XW9 330 aa15□□□□□ -0.01
BDNF-202ENST00000356660 AEBP1Q8IUX7 1158 aa15□□□□□ -0.01
BDNF-202ENST00000356660 PPIP5K1Q6PFW1 1433 aa15□□□□□ -0.01
BDNF-202ENST00000356660 ANKRD36BQ8N2N9 1353 aa15□□□□□ -0.01
BDNF-202ENST00000356660 TARBP1Q13395 1621 aaKnown RBP15□□□□□ -0.01
BDNF-202ENST00000356660 PDE1AP54750 535 aa15□□□□□ -0.01
BDNF-202ENST00000356660 CKAP2LQ8IYA6 745 aa15□□□□□ -0.01
BDNF-202ENST00000356660 GPATCH3Q96I76 525 aa15□□□□□ -0.01
BDNF-202ENST00000356660 CEBPZQ03701 1054 aaKnown RBP14.99□□□□□ -0.01
BDNF-202ENST00000356660 CHMP4AQ9BY43 222 aa14.99□□□□□ -0.01
BDNF-202ENST00000356660 NRDCO43847 1150 aa14.99□□□□□ -0.01
BDNF-202ENST00000356660 FBXO31Q5XUX0 539 aaPredicted RBP14.99□□□□□ -0.01
BDNF-202ENST00000356660 UBTFL1P0CB47 393 aaPredicted RBP14.98□□□□□ -0.01
BDNF-202ENST00000356660 ZKSCAN1P17029 563 aaPredicted RBP14.98□□□□□ -0.01
BDNF-202ENST00000356660 ABTB2Q8N961 1025 aa14.98□□□□□ -0.01
BDNF-202ENST00000356660 CCDC112Q8NEF3 446 aa14.98□□□□□ -0.01
BDNF-202ENST00000356660 PHF23Q9BUL5 403 aaPredicted RBP14.98□□□□□ -0.01
BDNF-202ENST00000356660 SYNMO15061 1565 aa14.98□□□□□ -0.01
BDNF-202ENST00000356660 H3BQV1 296 aa14.98□□□□□ -0.01
BDNF-202ENST00000356660 IFFO2Q5TF58 517 aa14.98□□□□□ -0.01
BDNF-202ENST00000356660 CEP85Q6P2H3 762 aa14.98□□□□□ -0.01
BDNF-202ENST00000356660 MYRIPQ8NFW9 859 aa14.98□□□□□ -0.01
BDNF-202ENST00000356660 ERICH4A6NGS2 130 aa14.97□□□□□ -0.01
BDNF-202ENST00000356660 TOMM22Q9NS69 142 aa14.97□□□□□ -0.01
BDNF-202ENST00000356660 CASTP20810 708 aaKnown RBP14.97□□□□□ -0.01
BDNF-202ENST00000356660 STK3Q13188 491 aa14.97□□□□□ -0.01
BDNF-202ENST00000356660 ZRANB1Q9UGI0 708 aa14.97□□□□□ -0.01
BDNF-202ENST00000356660 A0A1W2PP64 1363 aa14.97□□□□□ -0.01
BDNF-202ENST00000356660 IDI1Q13907 227 aa14.96□□□□□ -0.01
BDNF-202ENST00000356660 PLEKHF1Q96S99 279 aa14.96□□□□□ -0.01
BDNF-202ENST00000356660 TNMDQ9H2S6 317 aa14.96□□□□□ -0.01
BDNF-202ENST00000356660 SPG7Q9UQ90 795 aa14.96□□□□□ -0.01
BDNF-202ENST00000356660 E9PCH4 1651 aa14.96□□□□□ -0.01
BDNF-202ENST00000356660 GNAI3P08754 354 aa14.96□□□□□ -0.01
BDNF-202ENST00000356660 U2AF2P26368 475 aaKnown RBP eCLIP14.96□□□□□ -0.01
BDNF-202ENST00000356660 RBM33Q96EV2 1170 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms