RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
TRIM13-201ENST00000356017 RGS12O14924 1447 aa20.7■□□□□ 0.9
TRIM13-201ENST00000356017 THSD7AQ9UPZ6 1657 aa20.7■□□□□ 0.9
TRIM13-201ENST00000356017 PDE3BQ13370 1112 aa20.7■□□□□ 0.9
TRIM13-201ENST00000356017 CCDC184Q52MB2 194 aa20.7■□□□□ 0.9
TRIM13-201ENST00000356017 AMOTQ4VCS5 1084 aa20.69■□□□□ 0.9
TRIM13-201ENST00000356017 ZCRB1Q8TBF4 217 aaKnown RBP20.69■□□□□ 0.9
TRIM13-201ENST00000356017 SPG7Q9UQ90 795 aa20.69■□□□□ 0.9
TRIM13-201ENST00000356017 MIER1Q8N108 512 aa20.68■□□□□ 0.9
TRIM13-201ENST00000356017 NEFMP07197 916 aa20.67■□□□□ 0.9
TRIM13-201ENST00000356017 PLEKHO1Q53GL0 409 aaPredicted RBP20.67■□□□□ 0.9
TRIM13-201ENST00000356017 KRT27Q7Z3Y8 459 aa20.67■□□□□ 0.9
TRIM13-201ENST00000356017 RSPH6AQ9H0K4 717 aa20.67■□□□□ 0.9
TRIM13-201ENST00000356017 PARP4Q9UKK3 1724 aaKnown RBP20.67■□□□□ 0.9
TRIM13-201ENST00000356017 WNK3Q9BYP7 1800 aa20.67■□□□□ 0.9
TRIM13-201ENST00000356017 TNS2Q63HR2 1409 aa20.67■□□□□ 0.9
TRIM13-201ENST00000356017 PRKAR2BP31323 418 aa20.66■□□□□ 0.9
TRIM13-201ENST00000356017 PNISRQ8TF01 805 aaKnown RBP20.66■□□□□ 0.9
TRIM13-201ENST00000356017 ADAMTS8Q9UP79 889 aa20.65■□□□□ 0.9
TRIM13-201ENST00000356017 PCDH11XQ9BZA7 1347 aa20.65■□□□□ 0.9
TRIM13-201ENST00000356017 PCDH11YQ9BZA8 1340 aa20.65■□□□□ 0.9
TRIM13-201ENST00000356017 LRRC37A3O60309 1634 aa20.64■□□□□ 0.89
TRIM13-201ENST00000356017 DDX54Q8TDD1 881 aaKnown RBP20.63■□□□□ 0.89
TRIM13-201ENST00000356017 MARCH10Q8NA82 808 aaPredicted RBP20.61■□□□□ 0.89
TRIM13-201ENST00000356017 GAS2L2Q8NHY3 880 aa20.61■□□□□ 0.89
TRIM13-201ENST00000356017 PLEKHF1Q96S99 279 aa20.61■□□□□ 0.89
TRIM13-201ENST00000356017 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
TRIM13-201ENST00000356017 IFNL2Q8IZJ0 200 aa20.6■□□□□ 0.89
TRIM13-201ENST00000356017 C1orf141Q5JVX7 400 aa20.6■□□□□ 0.89
TRIM13-201ENST00000356017 ZNF530Q6P9A1 599 aaPredicted RBP20.6■□□□□ 0.89
TRIM13-201ENST00000356017 PHACTR3Q96KR7 559 aa20.6■□□□□ 0.89
TRIM13-201ENST00000356017 CYP27B1O15528 508 aa20.59■□□□□ 0.89
TRIM13-201ENST00000356017 MTHFSDQ2M296 383 aaKnown RBP20.59■□□□□ 0.89
TRIM13-201ENST00000356017 FAM196AQ6ZSG2 479 aa20.59■□□□□ 0.89
TRIM13-201ENST00000356017 RUNDC1Q96C34 613 aa20.59■□□□□ 0.89
TRIM13-201ENST00000356017 PKD1L3Q7Z443 1732 aa20.59■□□□□ 0.89
TRIM13-201ENST00000356017 HSP90AB1P08238 724 aaKnown RBP20.58■□□□□ 0.89
TRIM13-201ENST00000356017 PHKG2P15735 406 aa20.57■□□□□ 0.88
TRIM13-201ENST00000356017 FAM9BQ8IZU0 186 aa20.57■□□□□ 0.88
TRIM13-201ENST00000356017 AKAP4Q5JQC9 854 aa20.56■□□□□ 0.88
TRIM13-201ENST00000356017 BCL9O00512 1426 aa20.56■□□□□ 0.88
TRIM13-201ENST00000356017 BRWD3Q6RI45 1802 aa20.56■□□□□ 0.88
TRIM13-201ENST00000356017 NKX1-1Q15270 411 aaPredicted RBP20.56■□□□□ 0.88
TRIM13-201ENST00000356017 FAM182BQ5T319 152 aa20.55■□□□□ 0.88
TRIM13-201ENST00000356017 CCDC146Q8IYE0 955 aa20.55■□□□□ 0.88
TRIM13-201ENST00000356017 ILDR2Q71H61 639 aa20.54■□□□□ 0.88
TRIM13-201ENST00000356017 DCAF5Q96JK2 942 aa20.54■□□□□ 0.88
TRIM13-201ENST00000356017 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
TRIM13-201ENST00000356017 NFE2L2Q16236 605 aa20.53■□□□□ 0.88
TRIM13-201ENST00000356017 SHANK3Q9BYB0 1731 aa20.52■□□□□ 0.88
TRIM13-201ENST00000356017 MAP3K5Q99683 1374 aa20.51■□□□□ 0.87
TRIM13-201ENST00000356017 HTATSF1O43719 755 aaKnown RBP20.5■□□□□ 0.87
TRIM13-201ENST00000356017 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
TRIM13-201ENST00000356017 TMPOP42166 694 aaKnown RBP20.49■□□□□ 0.87
TRIM13-201ENST00000356017 MPRIPQ6WCQ1 1025 aa20.49■□□□□ 0.87
TRIM13-201ENST00000356017 ERVV-2B6SEH9 535 aa20.48■□□□□ 0.87
TRIM13-201ENST00000356017 RIPK4P57078 832 aa20.48■□□□□ 0.87
TRIM13-201ENST00000356017 LMOD3Q0VAK6 560 aa20.48■□□□□ 0.87
TRIM13-201ENST00000356017 APAF1O14727 1248 aa20.47■□□□□ 0.87
TRIM13-201ENST00000356017 CCDC125Q86Z20 511 aa20.46■□□□□ 0.87
TRIM13-201ENST00000356017 ACSBG1Q96GR2 724 aa20.46■□□□□ 0.87
TRIM13-201ENST00000356017 BCL11BQ9C0K0 894 aaPredicted RBP20.46■□□□□ 0.87
TRIM13-201ENST00000356017 RNMTO43148 476 aaKnown RBP20.45■□□□□ 0.87
TRIM13-201ENST00000356017 PRIM1P49642 420 aaKnown RBP20.45■□□□□ 0.87
TRIM13-201ENST00000356017 SYTL4Q96C24 671 aaPredicted RBP20.45■□□□□ 0.87
TRIM13-201ENST00000356017 KDM6AO15550 1401 aaPredicted RBP20.45■□□□□ 0.86
TRIM13-201ENST00000356017 TRIM37O94972 964 aa20.45■□□□□ 0.86
TRIM13-201ENST00000356017 NEUROD2Q15784 382 aa20.45■□□□□ 0.86
TRIM13-201ENST00000356017 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
TRIM13-201ENST00000356017 NGEFQ8N5V2 710 aa20.44■□□□□ 0.86
TRIM13-201ENST00000356017 IL17REQ8NFR9 667 aa20.44■□□□□ 0.86
TRIM13-201ENST00000356017 LGR6Q9HBX8 967 aa20.44■□□□□ 0.86
TRIM13-201ENST00000356017 RRP7AQ9Y3A4 280 aaKnown RBP20.44■□□□□ 0.86
TRIM13-201ENST00000356017 KCNQ2O43526 872 aa20.43■□□□□ 0.86
TRIM13-201ENST00000356017 CABP4P57796 275 aa20.43■□□□□ 0.86
TRIM13-201ENST00000356017 SF3B2Q13435 895 aaKnown RBP20.43■□□□□ 0.86
TRIM13-201ENST00000356017 TMOD3Q9NYL9 352 aa20.43■□□□□ 0.86
TRIM13-201ENST00000356017 TEFQ10587 303 aa20.42■□□□□ 0.86
TRIM13-201ENST00000356017 CEMIPQ8WUJ3 1361 aa20.42■□□□□ 0.86
TRIM13-201ENST00000356017 MCM10Q7L590 875 aa20.42■□□□□ 0.86
TRIM13-201ENST00000356017 SLC52A2Q9HAB3 445 aa20.42■□□□□ 0.86
TRIM13-201ENST00000356017 NFATC2IPQ8NCF5 419 aa20.41■□□□□ 0.86
TRIM13-201ENST00000356017 EP400Q96L91 3159 aa20.41■□□□□ 0.86
TRIM13-201ENST00000356017 DOT1LQ8TEK3 1739 aa20.4■□□□□ 0.86
TRIM13-201ENST00000356017 DCTN1Q14203 1278 aa20.39■□□□□ 0.86
TRIM13-201ENST00000356017 CCDC27Q2M243 656 aa20.39■□□□□ 0.86
TRIM13-201ENST00000356017 PIGBQ92521 554 aa20.39■□□□□ 0.86
TRIM13-201ENST00000356017 TRIM35Q9UPQ4 493 aa20.39■□□□□ 0.86
TRIM13-201ENST00000356017 NHSQ6T4R5 1651 aa20.39■□□□□ 0.85
TRIM13-201ENST00000356017 ADAMTS7Q9UKP4 1686 aa20.39■□□□□ 0.85
TRIM13-201ENST00000356017 UPF1Q92900 1129 aaKnown RBP eCLIP20.38■□□□□ 0.85
TRIM13-201ENST00000356017 SBF2Q86WG5 1849 aa20.38■□□□□ 0.85
TRIM13-201ENST00000356017 SCN11AQ9UI33 1791 aa20.38■□□□□ 0.85
TRIM13-201ENST00000356017 APBA3O96018 575 aa20.38■□□□□ 0.85
TRIM13-201ENST00000356017 PTF1AQ7RTS3 328 aa20.38■□□□□ 0.85
TRIM13-201ENST00000356017 MRC1P22897 1456 aa20.37■□□□□ 0.85
TRIM13-201ENST00000356017 TOGARAM1Q9Y4F4 1720 aa20.37■□□□□ 0.85
TRIM13-201ENST00000356017 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
TRIM13-201ENST00000356017 SMARCC1Q92922 1105 aaPredicted RBP20.36■□□□□ 0.85
TRIM13-201ENST00000356017 DLG5Q8TDM6 1919 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms