RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PDIA4P13667 645 aaKnown RBP16.95■□□□□ 0.3
SREBF1-202ENST00000355815 MPRIPQ6WCQ1 1025 aa16.95■□□□□ 0.3
SREBF1-202ENST00000355815 TNPO1Q92973 898 aaKnown RBP16.95■□□□□ 0.3
SREBF1-202ENST00000355815 HTATSF1O43719 755 aaKnown RBP16.94■□□□□ 0.3
SREBF1-202ENST00000355815 MYL6BP14649 208 aa16.94■□□□□ 0.3
SREBF1-202ENST00000355815 LRRCC1Q9C099 1032 aa16.94■□□□□ 0.3
SREBF1-202ENST00000355815 ERICH4A6NGS2 130 aa16.94■□□□□ 0.3
SREBF1-202ENST00000355815 GOLGA6L1Q8N7Z2 621 aa16.94■□□□□ 0.3
SREBF1-202ENST00000355815 RRAGDQ9NQL2 400 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-202ENST00000355815 RIC3Q7Z5B4 369 aa16.93■□□□□ 0.3
SREBF1-202ENST00000355815 PDCL3Q9H2J4 239 aa16.93■□□□□ 0.3
SREBF1-202ENST00000355815 G2E3Q7L622 706 aa16.93■□□□□ 0.3
SREBF1-202ENST00000355815 LRRFIP2Q9Y608 721 aaKnown RBP16.93■□□□□ 0.3
SREBF1-202ENST00000355815 SF3A1Q15459 793 aaKnown RBP16.93■□□□□ 0.3
SREBF1-202ENST00000355815 GORABQ5T7V8 394 aa16.93■□□□□ 0.3
SREBF1-202ENST00000355815 RPAP2Q8IXW5 612 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-202ENST00000355815 THEMISQ8N1K5 641 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-202ENST00000355815 TTC21BQ7Z4L5 1316 aa16.93■□□□□ 0.3
SREBF1-202ENST00000355815 PPIP5K1Q6PFW1 1433 aa16.93■□□□□ 0.3
SREBF1-202ENST00000355815 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
SREBF1-202ENST00000355815 BICD2Q8TD16 824 aa16.93■□□□□ 0.3
SREBF1-202ENST00000355815 NSD2O96028 1365 aa16.93■□□□□ 0.3
SREBF1-202ENST00000355815 YEATS2Q9ULM3 1422 aa16.92■□□□□ 0.3
SREBF1-202ENST00000355815 ZBTB7BO15156 539 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-202ENST00000355815 YTHDC2Q9H6S0 1430 aaKnown RBP16.92■□□□□ 0.3
SREBF1-202ENST00000355815 ERC2O15083 957 aa16.92■□□□□ 0.3
SREBF1-202ENST00000355815 RABEP1Q15276 862 aa16.92■□□□□ 0.3
SREBF1-202ENST00000355815 GPATCH3Q96I76 525 aa16.92■□□□□ 0.3
SREBF1-202ENST00000355815 FIBPO43427 364 aa16.91■□□□□ 0.3
SREBF1-202ENST00000355815 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
SREBF1-202ENST00000355815 CWC27Q6UX04 472 aaKnown RBP16.91■□□□□ 0.3
SREBF1-202ENST00000355815 JARID2Q92833 1246 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-202ENST00000355815 GNAT3A8MTJ3 354 aa16.91■□□□□ 0.3
SREBF1-202ENST00000355815 BMP2KLQ5H9B9 411 aa16.91■□□□□ 0.3
SREBF1-202ENST00000355815 SRCIN1Q9C0H9 1055 aa16.91■□□□□ 0.3
SREBF1-202ENST00000355815 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
SREBF1-202ENST00000355815 TAF7Q15545 349 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-202ENST00000355815 IGSF3O75054 1194 aa16.9■□□□□ 0.3
SREBF1-202ENST00000355815 CCT4P50991 539 aaKnown RBP16.9■□□□□ 0.3
SREBF1-202ENST00000355815 RAPGEF4Q8WZA2 1011 aa16.9■□□□□ 0.3
SREBF1-202ENST00000355815 FLIIQ13045 1269 aa16.9■□□□□ 0.3
SREBF1-202ENST00000355815 SYCE3A1L190 88 aa16.9■□□□□ 0.3
SREBF1-202ENST00000355815 SDSP20132 328 aa16.9■□□□□ 0.3
SREBF1-202ENST00000355815 CGNQ9P2M7 1197 aaKnown RBP16.9■□□□□ 0.3
SREBF1-202ENST00000355815 GDPD2Q9HCC8 539 aa16.89■□□□□ 0.29
SREBF1-202ENST00000355815 IL16Q14005 1332 aa16.89■□□□□ 0.29
SREBF1-202ENST00000355815 PREX2Q70Z35 1606 aa16.89■□□□□ 0.29
SREBF1-202ENST00000355815 IL13P35225 146 aa16.89■□□□□ 0.29
SREBF1-202ENST00000355815 NEXNQ0ZGT2 675 aa16.89■□□□□ 0.29
SREBF1-202ENST00000355815 TTC5Q8N0Z6 440 aa16.89■□□□□ 0.29
SREBF1-202ENST00000355815 CLASRPQ8N2M8 674 aaKnown RBP16.89■□□□□ 0.29
SREBF1-202ENST00000355815 MYO5CQ9NQX4 1742 aa16.89■□□□□ 0.29
SREBF1-202ENST00000355815 SPDYE4A6NLX3 237 aa16.89■□□□□ 0.29
SREBF1-202ENST00000355815 NEUROD6Q96NK8 337 aa16.89■□□□□ 0.29
SREBF1-202ENST00000355815 H3BQV1 296 aa16.88■□□□□ 0.29
SREBF1-202ENST00000355815 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
SREBF1-202ENST00000355815 PRDM15P57071 1507 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-202ENST00000355815 TPD52L1Q16890 204 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-202ENST00000355815 NOC3LQ8WTT2 800 aaKnown RBP16.88■□□□□ 0.29
SREBF1-202ENST00000355815 TRIM5Q9C035 493 aa16.88■□□□□ 0.29
SREBF1-202ENST00000355815 PROSER2Q86WR7 435 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-202ENST00000355815 RIMS2Q9UQ26 1411 aa16.88■□□□□ 0.29
SREBF1-202ENST00000355815 HMGN5P82970 282 aaKnown RBP16.87■□□□□ 0.29
SREBF1-202ENST00000355815 TAF7LQ5H9L4 462 aa16.87■□□□□ 0.29
SREBF1-202ENST00000355815 PLEKHF1Q96S99 279 aa16.87■□□□□ 0.29
SREBF1-202ENST00000355815 ATP6V1DQ9Y5K8 247 aa16.87■□□□□ 0.29
SREBF1-202ENST00000355815 BTBD11A6QL63 1104 aa16.87■□□□□ 0.29
SREBF1-202ENST00000355815 TPM4P67936 248 aa16.87■□□□□ 0.29
SREBF1-202ENST00000355815 TSPY26PQ9H489 355 aa16.87■□□□□ 0.29
SREBF1-202ENST00000355815 INSRP06213 1382 aa16.86■□□□□ 0.29
SREBF1-202ENST00000355815 CHD1O14646 1710 aa16.86■□□□□ 0.29
SREBF1-202ENST00000355815 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-202ENST00000355815 CDC42BPBQ9Y5S2 1711 aa16.86■□□□□ 0.29
SREBF1-202ENST00000355815 EYA1Q99502 592 aa16.86■□□□□ 0.29
SREBF1-202ENST00000355815 SMC3Q9UQE7 1217 aa16.86■□□□□ 0.29
SREBF1-202ENST00000355815 ABCC1P33527 1531 aa16.86■□□□□ 0.29
SREBF1-202ENST00000355815 KDM4AO75164 1064 aa16.85■□□□□ 0.29
SREBF1-202ENST00000355815 MX1P20591 662 aa16.85■□□□□ 0.29
SREBF1-202ENST00000355815 CLCN1P35523 988 aa16.85■□□□□ 0.29
SREBF1-202ENST00000355815 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
SREBF1-202ENST00000355815 SYTL4Q96C24 671 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-202ENST00000355815 MAP3K19Q56UN5 1328 aa16.85■□□□□ 0.29
SREBF1-202ENST00000355815 FMNL2Q96PY5 1086 aa16.85■□□□□ 0.29
SREBF1-202ENST00000355815 PI4KAP2A4QPH2 592 aa16.84■□□□□ 0.29
SREBF1-202ENST00000355815 PATL2C9JE40 543 aaKnown RBP16.84■□□□□ 0.29
SREBF1-202ENST00000355815 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-202ENST00000355815 TEX35Q5T0J7 233 aa16.84■□□□□ 0.29
SREBF1-202ENST00000355815 PI4KAP1Q8N8J0 262 aa16.84■□□□□ 0.29
SREBF1-202ENST00000355815 CCDC85AQ96PX6 553 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-202ENST00000355815 SPG7Q9UQ90 795 aa16.84■□□□□ 0.29
SREBF1-202ENST00000355815 PES1O00541 588 aaKnown RBP16.84■□□□□ 0.29
SREBF1-202ENST00000355815 STK3Q13188 491 aa16.84■□□□□ 0.29
SREBF1-202ENST00000355815 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
SREBF1-202ENST00000355815 FAM184AQ8NB25 1140 aa16.84■□□□□ 0.29
SREBF1-202ENST00000355815 PLEKHO1Q53GL0 409 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-202ENST00000355815 PLEKHM2Q8IWE5 1019 aa16.84■□□□□ 0.29
SREBF1-202ENST00000355815 PDCL2Q8N4E4 241 aa16.84■□□□□ 0.29
SREBF1-202ENST00000355815 DNAJC2Q99543 621 aaKnown RBP16.84■□□□□ 0.29
SREBF1-202ENST00000355815 FSD1Q9BTV5 496 aa16.83■□□□□ 0.29
SREBF1-202ENST00000355815 BBXQ8WY36 941 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms