RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 MAP3K5Q99683 1374 aa12.5□□□□□ -0.41
NPHP1-202ENST00000355301 JCADQ9P266 1359 aa12.5□□□□□ -0.41
NPHP1-202ENST00000355301 GNAI1P63096 354 aa12.49□□□□□ -0.41
NPHP1-202ENST00000355301 MCM10Q7L590 875 aa12.49□□□□□ -0.41
NPHP1-202ENST00000355301 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
NPHP1-202ENST00000355301 BTG4Q9NY30 223 aa12.49□□□□□ -0.41
NPHP1-202ENST00000355301 LRRC37A3O60309 1634 aa12.49□□□□□ -0.41
NPHP1-202ENST00000355301 MEGF6O75095 1541 aa12.49□□□□□ -0.41
NPHP1-202ENST00000355301 TOM1L2Q6ZVM7 507 aa12.49□□□□□ -0.41
NPHP1-202ENST00000355301 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
NPHP1-202ENST00000355301 CARD10Q9BWT7 1032 aa12.49□□□□□ -0.41
NPHP1-202ENST00000355301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.41
NPHP1-202ENST00000355301 CRB1P82279 1406 aa12.48□□□□□ -0.41
NPHP1-202ENST00000355301 NEFLP07196 543 aa12.48□□□□□ -0.41
NPHP1-202ENST00000355301 EVA1CP58658 441 aa12.48□□□□□ -0.41
NPHP1-202ENST00000355301 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
NPHP1-202ENST00000355301 PKD1L3Q7Z443 1732 aa12.47□□□□□ -0.41
NPHP1-202ENST00000355301 CT47B1P0C2W7 299 aaPredicted RBP12.47□□□□□ -0.41
NPHP1-202ENST00000355301 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
NPHP1-202ENST00000355301 AKAP4Q5JQC9 854 aa12.47□□□□□ -0.41
NPHP1-202ENST00000355301 LARP1Q6PKG0 1096 aaKnown RBP12.47□□□□□ -0.41
NPHP1-202ENST00000355301 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
NPHP1-202ENST00000355301 PARP4Q9UKK3 1724 aaKnown RBP12.47□□□□□ -0.41
NPHP1-202ENST00000355301 ZNF530Q6P9A1 599 aaPredicted RBP12.47□□□□□ -0.41
NPHP1-202ENST00000355301 OVOS2A0A0G2JMS6 1433 aa12.46□□□□□ -0.41
NPHP1-202ENST00000355301 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.41
NPHP1-202ENST00000355301 CHL1O00533 1208 aa12.46□□□□□ -0.42
NPHP1-202ENST00000355301 ADAMTS2O95450 1211 aa12.46□□□□□ -0.42
NPHP1-202ENST00000355301 IL17REQ8NFR9 667 aa12.46□□□□□ -0.42
NPHP1-202ENST00000355301 MBIPQ9NS73 344 aa12.46□□□□□ -0.42
NPHP1-202ENST00000355301 LAS1LQ9Y4W2 734 aaKnown RBP12.46□□□□□ -0.42
NPHP1-202ENST00000355301 NRAPQ86VF7 1730 aa12.45□□□□□ -0.42
NPHP1-202ENST00000355301 NWD2Q9ULI1 1742 aa12.45□□□□□ -0.42
NPHP1-202ENST00000355301 SPATA31A6Q5VVP1 1343 aa12.45□□□□□ -0.42
NPHP1-202ENST00000355301 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
NPHP1-202ENST00000355301 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
NPHP1-202ENST00000355301 RRP1P56182 461 aaKnown RBP12.45□□□□□ -0.42
NPHP1-202ENST00000355301 EXOSC9Q06265 439 aaKnown RBP12.45□□□□□ -0.42
NPHP1-202ENST00000355301 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
NPHP1-202ENST00000355301 SPG7Q9UQ90 795 aa12.45□□□□□ -0.42
NPHP1-202ENST00000355301 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
NPHP1-202ENST00000355301 C1orf141Q5JVX7 400 aa12.45□□□□□ -0.42
NPHP1-202ENST00000355301 SLIT2O94813 1529 aa12.44□□□□□ -0.42
NPHP1-202ENST00000355301 HSPA1LP34931 641 aa12.44□□□□□ -0.42
NPHP1-202ENST00000355301 FKBP8Q14318 412 aa12.44□□□□□ -0.42
NPHP1-202ENST00000355301 VIRMAQ69YN4 1812 aaKnown RBP12.43□□□□□ -0.42
NPHP1-202ENST00000355301 IL2RBP14784 551 aa12.43□□□□□ -0.42
NPHP1-202ENST00000355301 BABAM1Q9NWV8 329 aa12.43□□□□□ -0.42
NPHP1-202ENST00000355301 RARSP54136 660 aaKnown RBP12.43□□□□□ -0.42
NPHP1-202ENST00000355301 PHKG2P15735 406 aa12.42□□□□□ -0.42
NPHP1-202ENST00000355301 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
NPHP1-202ENST00000355301 IFNL2Q8IZJ0 200 aa12.42□□□□□ -0.42
NPHP1-202ENST00000355301 ZNF428Q96B54 188 aa12.42□□□□□ -0.42
NPHP1-202ENST00000355301 LGR6Q9HBX8 967 aa12.42□□□□□ -0.42
NPHP1-202ENST00000355301 RNMTO43148 476 aaKnown RBP12.41□□□□□ -0.42
NPHP1-202ENST00000355301 TAF7Q15545 349 aaPredicted RBP12.41□□□□□ -0.42
NPHP1-202ENST00000355301 ERICH6BQ5W0A0 696 aa12.41□□□□□ -0.42
NPHP1-202ENST00000355301 DISP2A7MBM2 1401 aa12.41□□□□□ -0.42
NPHP1-202ENST00000355301 SCN11AQ9UI33 1791 aa12.41□□□□□ -0.42
NPHP1-202ENST00000355301 CYP27B1O15528 508 aa12.41□□□□□ -0.42
NPHP1-202ENST00000355301 BCAR3O75815 825 aa12.41□□□□□ -0.42
NPHP1-202ENST00000355301 IRX6P78412 446 aaPredicted RBP12.41□□□□□ -0.42
NPHP1-202ENST00000355301 ZCRB1Q8TBF4 217 aaKnown RBP12.41□□□□□ -0.42
NPHP1-202ENST00000355301 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
NPHP1-202ENST00000355301 TSPYL4Q9UJ04 414 aa12.41□□□□□ -0.42
NPHP1-202ENST00000355301 LRP6O75581 1613 aa12.4□□□□□ -0.42
NPHP1-202ENST00000355301 PCDH11XQ9BZA7 1347 aa12.4□□□□□ -0.42
NPHP1-202ENST00000355301 PCDH11YQ9BZA8 1340 aa12.4□□□□□ -0.42
NPHP1-202ENST00000355301 SHANK3Q9BYB0 1731 aa12.4□□□□□ -0.42
NPHP1-202ENST00000355301 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.4□□□□□ -0.42
NPHP1-202ENST00000355301 SIPA1L3O60292 1781 aaPredicted RBP12.4□□□□□ -0.42
NPHP1-202ENST00000355301 KDM6AO15550 1401 aaPredicted RBP12.4□□□□□ -0.42
NPHP1-202ENST00000355301 VAMP4O75379 141 aa12.39□□□□□ -0.43
NPHP1-202ENST00000355301 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
NPHP1-202ENST00000355301 TSPYL6Q8N831 410 aa12.39□□□□□ -0.43
NPHP1-202ENST00000355301 C8orf58Q8NAV2 365 aa12.39□□□□□ -0.43
NPHP1-202ENST00000355301 MIS18AQ9NYP9 233 aa12.39□□□□□ -0.43
NPHP1-202ENST00000355301 WNK3Q9BYP7 1800 aa12.39□□□□□ -0.43
NPHP1-202ENST00000355301 SPATA31A1Q5TZJ5 1347 aa12.39□□□□□ -0.43
NPHP1-202ENST00000355301 PLIN1O60240 522 aa12.39□□□□□ -0.43
NPHP1-202ENST00000355301 TEFQ10587 303 aa12.39□□□□□ -0.43
NPHP1-202ENST00000355301 TWISTNBQ3B726 338 aaPredicted RBP12.39□□□□□ -0.43
NPHP1-202ENST00000355301 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
NPHP1-202ENST00000355301 FNBP4Q8N3X1 1017 aaPredicted RBP12.39□□□□□ -0.43
NPHP1-202ENST00000355301 DCAF5Q96JK2 942 aa12.39□□□□□ -0.43
NPHP1-202ENST00000355301 THRAP3Q9Y2W1 955 aaKnown RBP12.39□□□□□ -0.43
NPHP1-202ENST00000355301 KDM3BQ7LBC6 1761 aa12.38□□□□□ -0.43
NPHP1-202ENST00000355301 BCL9LQ86UU0 1499 aa12.38□□□□□ -0.43
NPHP1-202ENST00000355301 UNC5CLQ8IV45 518 aa12.38□□□□□ -0.43
NPHP1-202ENST00000355301 NGLY1Q96IV0 654 aa12.38□□□□□ -0.43
NPHP1-202ENST00000355301 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
NPHP1-202ENST00000355301 MRC1P22897 1456 aa12.38□□□□□ -0.43
NPHP1-202ENST00000355301 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
NPHP1-202ENST00000355301 SSH1Q8WYL5 1049 aa12.37□□□□□ -0.43
NPHP1-202ENST00000355301 SPATA31A5Q5VU36 1347 aa12.37□□□□□ -0.43
NPHP1-202ENST00000355301 SPATA31A7Q8IWB4 1347 aa12.37□□□□□ -0.43
NPHP1-202ENST00000355301 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.37□□□□□ -0.43
NPHP1-202ENST00000355301 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
NPHP1-202ENST00000355301 CDCA7Q9BWT1 371 aaPredicted RBP12.37□□□□□ -0.43
NPHP1-202ENST00000355301 BTBD11A6QL63 1104 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms