RNA–Protein interactions for RNA: ENST00000355260.7

NUP98-202, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 5,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-202ENST00000355260 GNAT3A8MTJ3 354 aa9.67□□□□□ -0.86
NUP98-202ENST00000355260 ESPNB1AK53 854 aa9.67□□□□□ -0.86
NUP98-202ENST00000355260 TRIM27P14373 513 aa9.67□□□□□ -0.86
NUP98-202ENST00000355260 KRT85P78386 507 aa9.67□□□□□ -0.86
NUP98-202ENST00000355260 MLH3Q9UHC1 1453 aa9.67□□□□□ -0.86
NUP98-202ENST00000355260 HMGB2P26583 209 aaKnown RBP9.67□□□□□ -0.86
NUP98-202ENST00000355260 ATP7BP35670 1465 aa9.67□□□□□ -0.86
NUP98-202ENST00000355260 HMGB1P09429 215 aaKnown RBP9.67□□□□□ -0.86
NUP98-202ENST00000355260 CFAP45Q9UL16 551 aa9.67□□□□□ -0.86
NUP98-202ENST00000355260 CTAGE5O15320 804 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 GLRX3O76003 335 aaKnown RBP9.66□□□□□ -0.86
NUP98-202ENST00000355260 NEK4P51957 841 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 AKAP17AQ02040 695 aaKnown RBP9.66□□□□□ -0.86
NUP98-202ENST00000355260 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
NUP98-202ENST00000355260 BICD2Q8TD16 824 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 SOX12O15370 315 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 RAPGEF4Q8WZA2 1011 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 ELL2O00472 640 aaPredicted RBP9.66□□□□□ -0.86
NUP98-202ENST00000355260 TUBB4AP04350 444 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 SAFBQ15424 915 aaKnown RBP eCLIP9.66□□□□□ -0.86
NUP98-202ENST00000355260 HECW2Q9P2P5 1572 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 CBFA2T2O43439 604 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 SLC4A2P04920 1241 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 XBP1P17861 261 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 TTC22Q5TAA0 569 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 TAF3Q5VWG9 929 aa9.66□□□□□ -0.86
NUP98-202ENST00000355260 CCDC183Q5T5S1 534 aa9.65□□□□□ -0.86
NUP98-202ENST00000355260 MADDQ8WXG6 1647 aa9.65□□□□□ -0.86
NUP98-202ENST00000355260 BRPF1P55201 1214 aaPredicted RBP9.65□□□□□ -0.86
NUP98-202ENST00000355260 NOL10Q9BSC4 688 aaKnown RBP9.65□□□□□ -0.86
NUP98-202ENST00000355260 LRRIQ1Q96JM4 1722 aa9.65□□□□□ -0.86
NUP98-202ENST00000355260 NPATQ14207 1427 aa9.65□□□□□ -0.86
NUP98-202ENST00000355260 YTHDC2Q9H6S0 1430 aaKnown RBP9.65□□□□□ -0.86
NUP98-202ENST00000355260 RIMS2Q9UQ26 1411 aa9.65□□□□□ -0.86
NUP98-202ENST00000355260 TRMT2AQ8IZ69 625 aaKnown RBP9.65□□□□□ -0.86
NUP98-202ENST00000355260 CTNNA3Q9UI47 895 aa9.65□□□□□ -0.86
NUP98-202ENST00000355260 CEP152O94986 1710 aa9.65□□□□□ -0.86
NUP98-202ENST00000355260 MX1P20591 662 aa9.65□□□□□ -0.87
NUP98-202ENST00000355260 AMOTL1Q8IY63 956 aa9.65□□□□□ -0.87
NUP98-202ENST00000355260 EFCAB6Q5THR3 1501 aa9.65□□□□□ -0.87
NUP98-202ENST00000355260 CPLX1O14810 134 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 CDKL5O76039 1030 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 RBM25P49756 843 aaKnown RBP9.64□□□□□ -0.87
NUP98-202ENST00000355260 SULT6B1Q6IMI4 303 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 SPG7Q9UQ90 795 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 C20orf194Q5TEA3 1177 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 OLFM4Q6UX06 510 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 TXLNBQ8N3L3 684 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 HMG20BQ9P0W2 317 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 MED14O60244 1454 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 HDGFL1Q5TGJ6 251 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 ERCC4Q92889 916 aaPredicted RBP9.64□□□□□ -0.87
NUP98-202ENST00000355260 BRMS1Q9HCU9 246 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 SURF6O75683 361 aaKnown RBP9.64□□□□□ -0.87
NUP98-202ENST00000355260 SSH2Q76I76 1423 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 TERF1P54274 439 aa9.64□□□□□ -0.87
NUP98-202ENST00000355260 BCL11BQ9C0K0 894 aaPredicted RBP9.64□□□□□ -0.87
NUP98-202ENST00000355260 RIC3Q7Z5B4 369 aa9.63□□□□□ -0.87
NUP98-202ENST00000355260 SCAND2PQ9GZW5 306 aaPredicted RBP9.63□□□□□ -0.87
NUP98-202ENST00000355260 ERICH2A1L162 156 aa9.63□□□□□ -0.87
NUP98-202ENST00000355260 CLCN1P35523 988 aa9.63□□□□□ -0.87
NUP98-202ENST00000355260 NLRP6P59044 892 aa9.63□□□□□ -0.87
NUP98-202ENST00000355260 INTS4Q96HW7 963 aaKnown RBP9.63□□□□□ -0.87
NUP98-202ENST00000355260 FSD1Q9BTV5 496 aa9.63□□□□□ -0.87
NUP98-202ENST00000355260 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.63□□□□□ -0.874e-7■■■□□ 17.5
NUP98-202ENST00000355260 PRPF40AO75400 957 aaKnown RBP9.63□□□□□ -0.87
NUP98-202ENST00000355260 MRPL50Q8N5N7 158 aaKnown RBP9.63□□□□□ -0.87
NUP98-202ENST00000355260 KIAA0232Q92628 1395 aa9.63□□□□□ -0.87
NUP98-202ENST00000355260 KINO60870 393 aaKnown RBP9.63□□□□□ -0.87
NUP98-202ENST00000355260 TXNDC2Q86VQ3 553 aa9.63□□□□□ -0.87
NUP98-202ENST00000355260 ANKRD44Q8N8A2 993 aa9.63□□□□□ -0.87
NUP98-202ENST00000355260 CHMP3Q9Y3E7 222 aa9.63□□□□□ -0.87
NUP98-202ENST00000355260 TNRQ92752 1358 aa9.63□□□□□ -0.87
NUP98-202ENST00000355260 CCDC66A2RUB6 948 aa9.62□□□□□ -0.87
NUP98-202ENST00000355260 RALYLQ86SE5 291 aaKnown RBP9.62□□□□□ -0.87
NUP98-202ENST00000355260 ERVK-7P63135 1459 aa9.62□□□□□ -0.87
NUP98-202ENST00000355260 MSH6P52701 1360 aa9.62□□□□□ -0.87
NUP98-202ENST00000355260 TAF7Q15545 349 aaPredicted RBP9.62□□□□□ -0.87
NUP98-202ENST00000355260 ARHGAP31Q2M1Z3 1444 aa9.62□□□□□ -0.87
NUP98-202ENST00000355260 VPS37CA5D8V6 355 aaPredicted RBP9.62□□□□□ -0.87
NUP98-202ENST00000355260 SART3Q15020 963 aaKnown RBP9.62□□□□□ -0.87
NUP98-202ENST00000355260 WASF1Q92558 559 aa9.62□□□□□ -0.87
NUP98-202ENST00000355260 RAD50Q92878 1312 aa9.62□□□□□ -0.87
NUP98-202ENST00000355260 CHD1O14646 1710 aa9.62□□□□□ -0.87
NUP98-202ENST00000355260 SENP3Q9H4L4 574 aaPredicted RBP9.62□□□□□ -0.87
NUP98-202ENST00000355260 RNF17Q9BXT8 1623 aaKnown RBP9.62□□□□□ -0.87
NUP98-202ENST00000355260 SMTNL1A8MU46 457 aa9.62□□□□□ -0.87
NUP98-202ENST00000355260 PRIMPOLQ96LW4 560 aa9.62□□□□□ -0.87
NUP98-202ENST00000355260 PDRG1Q9NUG6 133 aa9.62□□□□□ -0.87
NUP98-202ENST00000355260 AATKQ6ZMQ8 1374 aa9.61□□□□□ -0.87
NUP98-202ENST00000355260 TATP17735 454 aaPredicted RBP9.61□□□□□ -0.87
NUP98-202ENST00000355260 DDX19AQ9NUU7 478 aaKnown RBP9.61□□□□□ -0.87
NUP98-202ENST00000355260 FAM13BQ9NYF5 915 aa9.61□□□□□ -0.87
NUP98-202ENST00000355260 RAB3GAP1Q15042 981 aa9.61□□□□□ -0.87
NUP98-202ENST00000355260 FAM135BQ49AJ0 1406 aa9.61□□□□□ -0.87
NUP98-202ENST00000355260 HOXB7P09629 217 aa9.61□□□□□ -0.87
NUP98-202ENST00000355260 TNPO1Q92973 898 aaKnown RBP9.61□□□□□ -0.87
NUP98-202ENST00000355260 HYPKQ9NX55 129 aa9.61□□□□□ -0.87
NUP98-202ENST00000355260 IGHDP01880 384 aa9.61□□□□□ -0.87
NUP98-202ENST00000355260 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms