RNA–Protein interactions for RNA: ENST00000355123.8

ITSN2-201, Transcript of intersectin 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ITSN2, Length 6,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-201ENST00000355123 PDE3AQ14432 1141 aa19.91■□□□□ 0.78
ITSN2-201ENST00000355123 ATF7IPQ6VMQ6 1270 aa19.91■□□□□ 0.78
ITSN2-201ENST00000355123 CFTRP13569 1480 aa19.91■□□□□ 0.78
ITSN2-201ENST00000355123 KRT85P78386 507 aa19.91■□□□□ 0.78
ITSN2-201ENST00000355123 TDO2P48775 406 aa19.91■□□□□ 0.78
ITSN2-201ENST00000355123 MPHOSPH8Q99549 860 aa19.91■□□□□ 0.78
ITSN2-201ENST00000355123 CASTP20810 708 aaKnown RBP19.9■□□□□ 0.78
ITSN2-201ENST00000355123 NACAP1Q9BZK3 213 aa19.9■□□□□ 0.78
ITSN2-201ENST00000355123 ANKRD1Q15327 319 aa19.89■□□□□ 0.77
ITSN2-201ENST00000355123 SOGA3Q5TF21 947 aa19.89■□□□□ 0.77
ITSN2-201ENST00000355123 BLOC1S2Q6QNY1 142 aa19.89■□□□□ 0.77
ITSN2-201ENST00000355123 JMYQ8N9B5 988 aa19.89■□□□□ 0.77
ITSN2-201ENST00000355123 GOLGA6L7A0A1B0GV03 622 aa19.89■□□□□ 0.77
ITSN2-201ENST00000355123 PRKCSHP14314 528 aaPredicted RBP19.89■□□□□ 0.77
ITSN2-201ENST00000355123 THUMPD2Q9BTF0 503 aaKnown RBP19.89■□□□□ 0.77
ITSN2-201ENST00000355123 MATR3P43243 847 aaKnown RBP eCLIP19.88■□□□□ 0.77
ITSN2-201ENST00000355123 USP5P45974 858 aa19.88■□□□□ 0.77
ITSN2-201ENST00000355123 RAI14Q9P0K7 980 aa19.88■□□□□ 0.77
ITSN2-201ENST00000355123 SYCE3A1L190 88 aa19.88■□□□□ 0.77
ITSN2-201ENST00000355123 EIF3JO75822 258 aaKnown RBP19.88■□□□□ 0.77
ITSN2-201ENST00000355123 ZSCAN29Q8IWY8 852 aaPredicted RBP19.88■□□□□ 0.77
ITSN2-201ENST00000355123 PDCL2Q8N4E4 241 aa19.88■□□□□ 0.77
ITSN2-201ENST00000355123 CCDC113Q9H0I3 377 aa19.88■□□□□ 0.77
ITSN2-201ENST00000355123 SSR1P43307 286 aaKnown RBP19.88■□□□□ 0.77
ITSN2-201ENST00000355123 ERLIN1O75477 346 aa19.87■□□□□ 0.77
ITSN2-201ENST00000355123 STIM1Q13586 685 aa19.87■□□□□ 0.77
ITSN2-201ENST00000355123 EXOC6BQ9Y2D4 811 aa19.87■□□□□ 0.77
ITSN2-201ENST00000355123 TMEM57Q8N5G2 664 aa19.87■□□□□ 0.77
ITSN2-201ENST00000355123 DACH1Q9UI36 760 aa19.87■□□□□ 0.77
ITSN2-201ENST00000355123 NUP62CLQ9H1M0 184 aa19.86■□□□□ 0.77
ITSN2-201ENST00000355123 GOLGA6L10A0A0M3HER8 536 aa19.86■□□□□ 0.77
ITSN2-201ENST00000355123 IDH1O75874 414 aaKnown RBP19.86■□□□□ 0.77
ITSN2-201ENST00000355123 DNA2P51530 1060 aa19.86■□□□□ 0.77
ITSN2-201ENST00000355123 FERMT3Q86UX7 667 aa19.86■□□□□ 0.77
ITSN2-201ENST00000355123 POLR3GO15318 223 aaPredicted RBP19.86■□□□□ 0.77
ITSN2-201ENST00000355123 PIP4K2AP48426 406 aaPredicted RBP19.86■□□□□ 0.77
ITSN2-201ENST00000355123 DYDC1Q8WWB3 177 aa19.86■□□□□ 0.77
ITSN2-201ENST00000355123 KIAA1328Q86T90 577 aa19.85■□□□□ 0.77
ITSN2-201ENST00000355123 ERBINQ96RT1 1412 aa19.85■□□□□ 0.77
ITSN2-201ENST00000355123 CCDC83Q8IWF9 413 aa19.85■□□□□ 0.77
ITSN2-201ENST00000355123 GPATCH11Q8N954 259 aa19.85■□□□□ 0.77
ITSN2-201ENST00000355123 LARP6Q9BRS8 491 aaKnown RBP19.85■□□□□ 0.77
ITSN2-201ENST00000355123 UBAC1Q9BSL1 405 aa19.84■□□□□ 0.77
ITSN2-201ENST00000355123 MPHOSPH10O00566 681 aaKnown RBP19.84■□□□□ 0.77
ITSN2-201ENST00000355123 MCM10Q7L590 875 aa19.84■□□□□ 0.77
ITSN2-201ENST00000355123 GIMAP7Q8NHV1 300 aa19.84■□□□□ 0.77
ITSN2-201ENST00000355123 NOL7Q9UMY1 257 aaKnown RBP19.84■□□□□ 0.77
ITSN2-201ENST00000355123 SPG7Q9UQ90 795 aa19.84■□□□□ 0.77
ITSN2-201ENST00000355123 UPF3BQ9BZI7 483 aaKnown RBP19.84■□□□□ 0.77
ITSN2-201ENST00000355123 SLC26A8Q96RN1 970 aa19.83■□□□□ 0.77
ITSN2-201ENST00000355123 LRP2BPQ9P2M1 347 aa19.83■□□□□ 0.76
ITSN2-201ENST00000355123 ESPNB1AK53 854 aa19.83■□□□□ 0.76
ITSN2-201ENST00000355123 GBP2P32456 591 aaPredicted RBP19.83■□□□□ 0.76
ITSN2-201ENST00000355123 DHX8Q14562 1220 aaKnown RBP19.83■□□□□ 0.76
ITSN2-201ENST00000355123 ANKRD18AQ8IVF6 992 aa19.83■□□□□ 0.76
ITSN2-201ENST00000355123 GUCY1B3Q02153 619 aa19.82■□□□□ 0.76
ITSN2-201ENST00000355123 RTEL1-TNFRSF6BF6WH68 1400 aa19.82■□□□□ 0.76
ITSN2-201ENST00000355123 ZNF76P36508 570 aa19.82■□□□□ 0.76
ITSN2-201ENST00000355123 CEP57L1Q8IYX8 460 aa19.82■□□□□ 0.76
ITSN2-201ENST00000355123 PNISRQ8TF01 805 aaKnown RBP19.82■□□□□ 0.76
ITSN2-201ENST00000355123 CBFA2T2O43439 604 aa19.82■□□□□ 0.76
ITSN2-201ENST00000355123 BCCIPQ9P287 314 aaKnown RBP eCLIP19.82■□□□□ 0.76
ITSN2-201ENST00000355123 WDR63Q8IWG1 891 aa19.81■□□□□ 0.76
ITSN2-201ENST00000355123 PIP4K2BP78356 416 aa19.81■□□□□ 0.76
ITSN2-201ENST00000355123 USHBP1Q8N6Y0 703 aa19.81■□□□□ 0.76
ITSN2-201ENST00000355123 ZHX1Q9UKY1 873 aaPredicted RBP19.81■□□□□ 0.76
ITSN2-201ENST00000355123 ABCF2Q9UG63 623 aa19.81■□□□□ 0.76
ITSN2-201ENST00000355123 ZC3H6P61129 1189 aaKnown RBP19.8■□□□□ 0.76
ITSN2-201ENST00000355123 CASKIN1Q8WXD9 1431 aa19.8■□□□□ 0.76
ITSN2-201ENST00000355123 PRPF40BQ6NWY9 871 aaKnown RBP19.8■□□□□ 0.76
ITSN2-201ENST00000355123 SRRTQ9BXP5 876 aaKnown RBP19.8■□□□□ 0.76
ITSN2-201ENST00000355123 MCM4P33991 863 aa19.8■□□□□ 0.76
ITSN2-201ENST00000355123 ZSCAN25Q6NSZ9 544 aa19.8■□□□□ 0.76
ITSN2-201ENST00000355123 IPO4Q8TEX9 1081 aaKnown RBP19.8■□□□□ 0.76
ITSN2-201ENST00000355123 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.8■□□□□ 0.76
ITSN2-201ENST00000355123 TMCO3Q6UWJ1 677 aa19.8■□□□□ 0.76
ITSN2-201ENST00000355123 CFAP45Q9UL16 551 aa19.8■□□□□ 0.76
ITSN2-201ENST00000355123 EIF5P55010 431 aaKnown RBP19.79■□□□□ 0.76
ITSN2-201ENST00000355123 GOPCQ9HD26 462 aa19.79■□□□□ 0.76
ITSN2-201ENST00000355123 SCAPERQ9BY12 1400 aa19.79■□□□□ 0.76
ITSN2-201ENST00000355123 SPDYE4A6NLX3 237 aa19.79■□□□□ 0.76
ITSN2-201ENST00000355123 RRP9O43818 475 aaKnown RBP19.79■□□□□ 0.76
ITSN2-201ENST00000355123 MAP2K1Q02750 393 aaPredicted RBP19.79■□□□□ 0.76
ITSN2-201ENST00000355123 CCDC97Q96F63 343 aaPredicted RBP19.79■□□□□ 0.76
ITSN2-201ENST00000355123 EPB41L2O43491 1005 aaKnown RBP19.79■□□□□ 0.76
ITSN2-201ENST00000355123 CFAP100Q494V2 611 aa19.79■□□□□ 0.76
ITSN2-201ENST00000355123 STAC3Q96MF2 364 aa19.79■□□□□ 0.76
ITSN2-201ENST00000355123 C20orf194Q5TEA3 1177 aa19.78■□□□□ 0.76
ITSN2-201ENST00000355123 CHMP4BP1P59074 171 aa19.78■□□□□ 0.76
ITSN2-201ENST00000355123 RNF187Q5TA31 235 aaPredicted RBP19.78■□□□□ 0.76
ITSN2-201ENST00000355123 KLHL10Q6JEL2 608 aa19.78■□□□□ 0.76
ITSN2-201ENST00000355123 CGNQ9P2M7 1197 aaKnown RBP19.78■□□□□ 0.76
ITSN2-201ENST00000355123 CCDC82Q8N4S0 544 aa19.78■□□□□ 0.76
ITSN2-201ENST00000355123 C9orf84Q5VXU9 1444 aa19.78■□□□□ 0.76
ITSN2-201ENST00000355123 AIDAQ96BJ3 306 aa19.78■□□□□ 0.76
ITSN2-201ENST00000355123 UBXN4Q92575 508 aa19.77■□□□□ 0.76
ITSN2-201ENST00000355123 ZBTB9Q96C00 473 aa19.77■□□□□ 0.76
ITSN2-201ENST00000355123 BOLA2Q9H3K6 86 aa19.77■□□□□ 0.76
ITSN2-201ENST00000355123 TRMT1Q9NXH9 659 aaKnown RBP19.77■□□□□ 0.76
ITSN2-201ENST00000355123 CEP126Q9P2H0 1117 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms