RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 HSP90AB1P08238 724 aaKnown RBP11.58□□□□□ -0.56
SMG6-202ENST00000354901 TWISTNBQ3B726 338 aaPredicted RBP11.58□□□□□ -0.56
SMG6-202ENST00000354901 C8orf58Q8NAV2 365 aa11.58□□□□□ -0.56
SMG6-202ENST00000354901 CHMP4AQ9BY43 222 aa11.58□□□□□ -0.56
SMG6-202ENST00000354901 COG3Q96JB2 828 aa11.57□□□□□ -0.56
SMG6-202ENST00000354901 SPDYE4A6NLX3 237 aa11.57□□□□□ -0.56
SMG6-202ENST00000354901 NUCB1Q02818 461 aa11.57□□□□□ -0.56
SMG6-202ENST00000354901 TPRNQ4KMQ1 711 aa11.57□□□□□ -0.56
SMG6-202ENST00000354901 NUDT16Q96DE0 195 aaKnown RBP11.57□□□□□ -0.56
SMG6-202ENST00000354901 CGNQ9P2M7 1197 aaKnown RBP11.57□□□□□ -0.56
SMG6-202ENST00000354901 ALDH1L2Q3SY69 923 aa11.56□□□□□ -0.56
SMG6-202ENST00000354901 AEBP1Q8IUX7 1158 aa11.56□□□□□ -0.56
SMG6-202ENST00000354901 LRRC7Q96NW7 1537 aa11.56□□□□□ -0.56
SMG6-202ENST00000354901 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
SMG6-202ENST00000354901 PTMAP06454 111 aaKnown RBP11.56□□□□□ -0.56
SMG6-202ENST00000354901 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
SMG6-202ENST00000354901 GNAI1P63096 354 aa11.56□□□□□ -0.56
SMG6-202ENST00000354901 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
SMG6-202ENST00000354901 MED14O60244 1454 aa11.55□□□□□ -0.56
SMG6-202ENST00000354901 ZBTB7BO15156 539 aaPredicted RBP11.55□□□□□ -0.56
SMG6-202ENST00000354901 IL13P35225 146 aa11.55□□□□□ -0.56
SMG6-202ENST00000354901 CCDC173Q0VFZ6 552 aa11.55□□□□□ -0.56
SMG6-202ENST00000354901 DNAJC5Q9H3Z4 198 aa11.55□□□□□ -0.56
SMG6-202ENST00000354901 DDX49Q9Y6V7 483 aaKnown RBP11.55□□□□□ -0.56
SMG6-202ENST00000354901 ANKRD26Q9UPS8 1709 aa11.55□□□□□ -0.56
SMG6-202ENST00000354901 PPIP5K1Q6PFW1 1433 aa11.55□□□□□ -0.56
SMG6-202ENST00000354901 SULT6B1Q6IMI4 303 aa11.54□□□□□ -0.56
SMG6-202ENST00000354901 TNPO1Q92973 898 aaKnown RBP11.54□□□□□ -0.56
SMG6-202ENST00000354901 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
SMG6-202ENST00000354901 METP08581 1390 aa11.54□□□□□ -0.56
SMG6-202ENST00000354901 MCM10Q7L590 875 aa11.54□□□□□ -0.56
SMG6-202ENST00000354901 ATP7BP35670 1465 aa11.54□□□□□ -0.56
SMG6-202ENST00000354901 SIRT2Q8IXJ6 389 aa11.53□□□□□ -0.56
SMG6-202ENST00000354901 GBP4Q96PP9 640 aa11.53□□□□□ -0.56
SMG6-202ENST00000354901 EID1Q9Y6B2 187 aa11.53□□□□□ -0.56
SMG6-202ENST00000354901 ZNF142P52746 1687 aaPredicted RBP11.53□□□□□ -0.56
SMG6-202ENST00000354901 ADAMTSL3P82987 1691 aa11.53□□□□□ -0.56
SMG6-202ENST00000354901 DMTNQ08495 405 aa11.53□□□□□ -0.56
SMG6-202ENST00000354901 DHX37Q8IY37 1157 aaKnown RBP11.53□□□□□ -0.56
SMG6-202ENST00000354901 MIS18AQ9NYP9 233 aa11.53□□□□□ -0.56
SMG6-202ENST00000354901 IFT57Q9NWB7 429 aa11.52□□□□□ -0.56
SMG6-202ENST00000354901 CCDC61Q9Y6R9 512 aa11.52□□□□□ -0.56
SMG6-202ENST00000354901 THEMISQ8N1K5 641 aaPredicted RBP11.52□□□□□ -0.57
SMG6-202ENST00000354901 RNF214Q8ND24 703 aa11.52□□□□□ -0.57
SMG6-202ENST00000354901 MAP2P11137 1827 aaKnown RBP11.52□□□□□ -0.57
SMG6-202ENST00000354901 ADAMTS13Q76LX8 1427 aa11.52□□□□□ -0.57
SMG6-202ENST00000354901 ZNF771Q7L3S4 317 aaPredicted RBP11.51□□□□□ -0.57
SMG6-202ENST00000354901 CD2BP2O95400 341 aaKnown RBP11.51□□□□□ -0.57
SMG6-202ENST00000354901 TBC1D9Q6ZT07 1266 aa11.51□□□□□ -0.57
SMG6-202ENST00000354901 C16orf71Q8IYS4 520 aaPredicted RBP11.51□□□□□ -0.57
SMG6-202ENST00000354901 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
SMG6-202ENST00000354901 CAVIN1Q6NZI2 390 aaKnown RBP11.51□□□□□ -0.57
SMG6-202ENST00000354901 ZNF830Q96NB3 372 aaPredicted RBP11.51□□□□□ -0.57
SMG6-202ENST00000354901 RIMS1Q86UR5 1692 aaKnown RBP11.5□□□□□ -0.57
SMG6-202ENST00000354901 CEP170BQ9Y4F5 1589 aaPredicted RBP11.5□□□□□ -0.57
SMG6-202ENST00000354901 ZSCAN20P17040 1043 aaPredicted RBP11.5□□□□□ -0.57
SMG6-202ENST00000354901 KIF20BQ96Q89 1820 aa11.5□□□□□ -0.57
SMG6-202ENST00000354901 HSP90AB2PQ58FF8 381 aa11.5□□□□□ -0.57
SMG6-202ENST00000354901 BMP2KLQ5H9B9 411 aa11.5□□□□□ -0.57
SMG6-202ENST00000354901 GCC1Q96CN9 775 aa11.5□□□□□ -0.57
SMG6-202ENST00000354901 CCDC94Q9BW85 323 aaPredicted RBP11.5□□□□□ -0.57
SMG6-202ENST00000354901 PIK3R4Q99570 1358 aa11.49□□□□□ -0.57
SMG6-202ENST00000354901 GOLGA6L22H0YM25 854 aa11.49□□□□□ -0.57
SMG6-202ENST00000354901 LMOD3Q0VAK6 560 aa11.49□□□□□ -0.57
SMG6-202ENST00000354901 CERS3Q8IU89 383 aa11.49□□□□□ -0.57
SMG6-202ENST00000354901 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
SMG6-202ENST00000354901 SMARCA5O60264 1052 aaPredicted RBP11.49□□□□□ -0.57
SMG6-202ENST00000354901 EIF4A2Q14240 407 aaKnown RBP11.49□□□□□ -0.57
SMG6-202ENST00000354901 FOXD4L5Q5VV16 416 aaPredicted RBP11.49□□□□□ -0.57
SMG6-202ENST00000354901 SLC4A10Q6U841 1118 aa11.49□□□□□ -0.57
SMG6-202ENST00000354901 OTUD7AQ8TE49 926 aaPredicted RBP11.49□□□□□ -0.57
SMG6-202ENST00000354901 FOXD4L4Q8WXT5 416 aaPredicted RBP11.49□□□□□ -0.57
SMG6-202ENST00000354901 ZNF428Q96B54 188 aa11.49□□□□□ -0.57
SMG6-202ENST00000354901 SLC26A8Q96RN1 970 aa11.49□□□□□ -0.57
SMG6-202ENST00000354901 API5Q9BZZ5 524 aaKnown RBP11.49□□□□□ -0.57
SMG6-202ENST00000354901 ZNF853P0CG23 659 aa11.48□□□□□ -0.57
SMG6-202ENST00000354901 TBX22Q9Y458 520 aa11.48□□□□□ -0.57
SMG6-202ENST00000354901 PTCH1Q13635 1447 aa11.48□□□□□ -0.57
SMG6-202ENST00000354901 EDC4Q6P2E9 1401 aaKnown RBP11.48□□□□□ -0.57
SMG6-202ENST00000354901 DYNC1I1O14576 645 aa11.47□□□□□ -0.57
SMG6-202ENST00000354901 FOXO3O43524 673 aa11.47□□□□□ -0.57
SMG6-202ENST00000354901 SSFA2P28290 1259 aa11.47□□□□□ -0.57
SMG6-202ENST00000354901 RBM25P49756 843 aaKnown RBP11.47□□□□□ -0.57
SMG6-202ENST00000354901 ARHGAP45Q92619 1136 aa11.47□□□□□ -0.57
SMG6-202ENST00000354901 NECTIN2Q92692 538 aa11.47□□□□□ -0.57
SMG6-202ENST00000354901 ABCC4O15439 1325 aa11.47□□□□□ -0.57
SMG6-202ENST00000354901 TRERF1Q96PN7 1200 aa11.47□□□□□ -0.57
SMG6-202ENST00000354901 MCTP1Q6DN14 999 aa11.47□□□□□ -0.57
SMG6-202ENST00000354901 TMEM51Q9NW97 253 aa11.47□□□□□ -0.57
SMG6-202ENST00000354901 MTERF4Q7Z6M4 381 aaKnown RBP11.46□□□□□ -0.57
SMG6-202ENST00000354901 IPO4Q8TEX9 1081 aaKnown RBP11.46□□□□□ -0.57
SMG6-202ENST00000354901 CDC42BPGQ6DT37 1551 aa11.46□□□□□ -0.57
SMG6-202ENST00000354901 ACEP12821 1306 aa11.46□□□□□ -0.57
SMG6-202ENST00000354901 F6X3S4 739 aa11.46□□□□□ -0.58
SMG6-202ENST00000354901 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.58
SMG6-202ENST00000354901 SASS6Q6UVJ0 657 aa11.46□□□□□ -0.58
SMG6-202ENST00000354901 KIF2CQ99661 725 aa11.46□□□□□ -0.58
SMG6-202ENST00000354901 PLCB2Q00722 1185 aa11.45□□□□□ -0.58
SMG6-202ENST00000354901 NUTM2GQ5VZR2 741 aa11.45□□□□□ -0.58
SMG6-202ENST00000354901 MEIS3Q99687 375 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms