RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 SYCP2Q9BX26 1530 aa14.63□□□□□ -0.07
TRPM3-201ENST00000354500 TATP17735 454 aaPredicted RBP14.63□□□□□ -0.07
TRPM3-201ENST00000354500 RRP12Q5JTH9 1297 aaKnown RBP14.63□□□□□ -0.07
TRPM3-201ENST00000354500 HOMER1Q86YM7 354 aa14.63□□□□□ -0.07
TRPM3-201ENST00000354500 TSPY26PQ9H489 355 aa14.63□□□□□ -0.07
TRPM3-201ENST00000354500 FKBP4Q02790 459 aaKnown RBP eCLIP14.63□□□□□ -0.07
TRPM3-201ENST00000354500 SPG7Q9UQ90 795 aa14.63□□□□□ -0.07
TRPM3-201ENST00000354500 PSMA5P28066 241 aa14.62□□□□□ -0.07
TRPM3-201ENST00000354500 MCM2P49736 904 aa14.62□□□□□ -0.07
TRPM3-201ENST00000354500 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.62□□□□□ -0.07
TRPM3-201ENST00000354500 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
TRPM3-201ENST00000354500 CASTP20810 708 aaKnown RBP14.62□□□□□ -0.07
TRPM3-201ENST00000354500 FLIIQ13045 1269 aa14.62□□□□□ -0.07
TRPM3-201ENST00000354500 MARCH6O60337 910 aa14.62□□□□□ -0.07
TRPM3-201ENST00000354500 POLKQ9UBT6 870 aa14.62□□□□□ -0.07
TRPM3-201ENST00000354500 LRRFIP1Q32MZ4 808 aaKnown RBP14.61□□□□□ -0.07
TRPM3-201ENST00000354500 VPS53Q5VIR6 699 aa14.61□□□□□ -0.07
TRPM3-201ENST00000354500 CCDC83Q8IWF9 413 aa14.61□□□□□ -0.07
TRPM3-201ENST00000354500 CABP4P57796 275 aa14.61□□□□□ -0.07
TRPM3-201ENST00000354500 PRPF40BQ6NWY9 871 aaKnown RBP14.61□□□□□ -0.07
TRPM3-201ENST00000354500 PANK2Q9BZ23 570 aa14.61□□□□□ -0.07
TRPM3-201ENST00000354500 CWC22Q9HCG8 908 aaKnown RBP14.61□□□□□ -0.07
TRPM3-201ENST00000354500 ACEP12821 1306 aa14.6□□□□□ -0.07
TRPM3-201ENST00000354500 RAPGEF6Q8TEU7 1601 aa14.6□□□□□ -0.07
TRPM3-201ENST00000354500 FAM135AQ9P2D6 1515 aa14.6□□□□□ -0.07
TRPM3-201ENST00000354500 CIZ1Q9ULV3 898 aaPredicted RBP14.6□□□□□ -0.07
TRPM3-201ENST00000354500 BLOC1S2Q6QNY1 142 aa14.6□□□□□ -0.07
TRPM3-201ENST00000354500 TCOF1Q13428 1488 aaKnown RBP14.59□□□□□ -0.07
TRPM3-201ENST00000354500 WDR33Q9C0J8 1336 aaKnown RBP14.59□□□□□ -0.07
TRPM3-201ENST00000354500 PDRG1Q9NUG6 133 aa14.59□□□□□ -0.07
TRPM3-201ENST00000354500 ABCC11Q96J66 1382 aa14.59□□□□□ -0.07
TRPM3-201ENST00000354500 KDM5BQ9UGL1 1544 aa14.59□□□□□ -0.07
TRPM3-201ENST00000354500 DHX16O60231 1041 aaKnown RBP14.59□□□□□ -0.07
TRPM3-201ENST00000354500 BMP2KLQ5H9B9 411 aa14.59□□□□□ -0.07
TRPM3-201ENST00000354500 CAMK4Q16566 473 aa14.58□□□□□ -0.07
TRPM3-201ENST00000354500 PI4KAP2A4QPH2 592 aa14.58□□□□□ -0.08
TRPM3-201ENST00000354500 CCDC173Q0VFZ6 552 aa14.58□□□□□ -0.08
TRPM3-201ENST00000354500 PI4KAP1Q8N8J0 262 aa14.58□□□□□ -0.08
TRPM3-201ENST00000354500 RBM27Q9P2N5 1060 aaKnown RBP14.58□□□□□ -0.08
TRPM3-201ENST00000354500 DTNBO60941 627 aa14.58□□□□□ -0.08
TRPM3-201ENST00000354500 CCDC39Q9UFE4 941 aa14.58□□□□□ -0.08
TRPM3-201ENST00000354500 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
TRPM3-201ENST00000354500 PLCH2O75038 1416 aa14.57□□□□□ -0.08
TRPM3-201ENST00000354500 SDSP20132 328 aa14.57□□□□□ -0.08
TRPM3-201ENST00000354500 TCEANC2Q96MN5 208 aa14.57□□□□□ -0.08
TRPM3-201ENST00000354500 PDCP20941 246 aa14.57□□□□□ -0.08
TRPM3-201ENST00000354500 ERC1Q8IUD2 1116 aa14.57□□□□□ -0.08
TRPM3-201ENST00000354500 KIF1BPQ96EK5 621 aa14.57□□□□□ -0.08
TRPM3-201ENST00000354500 KINO60870 393 aaKnown RBP14.56□□□□□ -0.08
TRPM3-201ENST00000354500 CNNM1Q9NRU3 951 aa14.56□□□□□ -0.08
TRPM3-201ENST00000354500 NUCB1Q02818 461 aa14.56□□□□□ -0.08
TRPM3-201ENST00000354500 PHF23Q9BUL5 403 aaPredicted RBP14.56□□□□□ -0.08
TRPM3-201ENST00000354500 ASXL1Q8IXJ9 1541 aa14.56□□□□□ -0.08
TRPM3-201ENST00000354500 POGZQ7Z3K3 1410 aa14.56□□□□□ -0.08
TRPM3-201ENST00000354500 TPM3P06753 285 aa14.56□□□□□ -0.08
TRPM3-201ENST00000354500 ME1P48163 572 aa14.56□□□□□ -0.08
TRPM3-201ENST00000354500 PIP4K2AP48426 406 aaPredicted RBP14.56□□□□□ -0.08
TRPM3-201ENST00000354500 PPP1R42Q7Z4L9 355 aa14.56□□□□□ -0.08
TRPM3-201ENST00000354500 TEX14Q8IWB6 1497 aa14.56□□□□□ -0.08
TRPM3-201ENST00000354500 MAGI3Q5TCQ9 1506 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 VAMP4O75379 141 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 ADAMTS2O95450 1211 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 GUCY1B3Q02153 619 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 PDILTQ8N807 584 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 DNAAF4Q8WXU2 420 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 ERICH2A1L162 156 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 ATP5J2-PTCD1G3V325 749 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 KRT85P78386 507 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 HDAC1Q13547 482 aaPredicted RBP14.55□□□□□ -0.08
TRPM3-201ENST00000354500 STK38Q15208 465 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 MYD88Q99836 296 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 PHF8Q9UPP1 1060 aa14.55□□□□□ -0.08
TRPM3-201ENST00000354500 WDR62O43379 1518 aa14.54□□□□□ -0.08
TRPM3-201ENST00000354500 TTLL5Q6EMB2 1281 aa14.54□□□□□ -0.08
TRPM3-201ENST00000354500 TNMDQ9H2S6 317 aa14.54□□□□□ -0.08
TRPM3-201ENST00000354500 TFIP11Q9UBB9 837 aaKnown RBP14.54□□□□□ -0.08
TRPM3-201ENST00000354500 BAG4O95429 457 aaKnown RBP14.54□□□□□ -0.08
TRPM3-201ENST00000354500 SMC2O95347 1197 aa14.53□□□□□ -0.08
TRPM3-201ENST00000354500 EIF4A2Q14240 407 aaKnown RBP14.53□□□□□ -0.08
TRPM3-201ENST00000354500 SAFBQ15424 915 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRPM3-201ENST00000354500 FILIP1Q7Z7B0 1213 aa14.53□□□□□ -0.08
TRPM3-201ENST00000354500 OTUD7AQ8TE49 926 aaPredicted RBP14.53□□□□□ -0.08
TRPM3-201ENST00000354500 DENND4BO75064 1496 aaPredicted RBP14.53□□□□□ -0.08
TRPM3-201ENST00000354500 MRPL50Q8N5N7 158 aaKnown RBP14.53□□□□□ -0.08
TRPM3-201ENST00000354500 ANKRD36BQ8N2N9 1353 aa14.53□□□□□ -0.08
TRPM3-201ENST00000354500 RAB11FIP3O75154 756 aa14.53□□□□□ -0.08
TRPM3-201ENST00000354500 GLRX3O76003 335 aaKnown RBP14.53□□□□□ -0.08
TRPM3-201ENST00000354500 TTC39AQ5SRH9 613 aa14.53□□□□□ -0.08
TRPM3-201ENST00000354500 TTC22Q5TAA0 569 aa14.53□□□□□ -0.08
TRPM3-201ENST00000354500 PCMTD1Q96MG8 357 aaPredicted RBP14.53□□□□□ -0.08
TRPM3-201ENST00000354500 A2MP01023 1474 aa14.53□□□□□ -0.08
TRPM3-201ENST00000354500 CCDC57Q2TAC2 916 aa14.52□□□□□ -0.08
TRPM3-201ENST00000354500 SPATA32Q96LK8 384 aa14.52□□□□□ -0.08
TRPM3-201ENST00000354500 ZBTB40Q9NUA8 1239 aa14.52□□□□□ -0.08
TRPM3-201ENST00000354500 CEP126Q9P2H0 1117 aa14.52□□□□□ -0.08
TRPM3-201ENST00000354500 KAT6BQ8WYB5 2073 aa14.52□□□□□ -0.08
TRPM3-201ENST00000354500 XRCC6P12956 609 aaKnown RBP eCLIP14.52□□□□□ -0.09
TRPM3-201ENST00000354500 CCDC158Q5M9N0 1113 aa14.52□□□□□ -0.09
TRPM3-201ENST00000354500 POLR3AO14802 1390 aaPredicted RBP14.51□□□□□ -0.09
TRPM3-201ENST00000354500 DISP1Q96F81 1524 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms