RNA–Protein interactions for RNA: ENST00000353383.5

RAI1-201, Transcript of retinoic acid induced 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAI1, Length 7,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1-201ENST00000353383 BCCIPQ9P287 314 aaKnown RBP eCLIP20.17■□□□□ 0.82
RAI1-201ENST00000353383 IGHMBP2P38935 993 aaKnown RBP20.17■□□□□ 0.82
RAI1-201ENST00000353383 SPG7Q9UQ90 795 aa20.17■□□□□ 0.82
RAI1-201ENST00000353383 MRE11P49959 708 aa20.17■□□□□ 0.82
RAI1-201ENST00000353383 CCDC150Q8NCX0 1101 aa20.17■□□□□ 0.82
RAI1-201ENST00000353383 BTBD11A6QL63 1104 aa20.17■□□□□ 0.82
RAI1-201ENST00000353383 EPB41L2O43491 1005 aaKnown RBP20.17■□□□□ 0.82
RAI1-201ENST00000353383 EIF3JO75822 258 aaKnown RBP20.17■□□□□ 0.82
RAI1-201ENST00000353383 CETN2P41208 172 aa20.16■□□□□ 0.82
RAI1-201ENST00000353383 MKNK2Q9HBH9 465 aa20.16■□□□□ 0.82
RAI1-201ENST00000353383 MBD3O95983 291 aa20.16■□□□□ 0.82
RAI1-201ENST00000353383 GSTTP1A0A1W2PQM5 241 aa20.16■□□□□ 0.82
RAI1-201ENST00000353383 MCM2P49736 904 aa20.16■□□□□ 0.82
RAI1-201ENST00000353383 SMARCA2P51531 1590 aa20.15■□□□□ 0.82
RAI1-201ENST00000353383 ZPR1O75312 459 aa20.15■□□□□ 0.82
RAI1-201ENST00000353383 CDKL5O76039 1030 aa20.15■□□□□ 0.82
RAI1-201ENST00000353383 CBFA2T2O43439 604 aa20.15■□□□□ 0.82
RAI1-201ENST00000353383 MAPK8IP2Q13387 824 aaPredicted RBP20.15■□□□□ 0.82
RAI1-201ENST00000353383 SULT6B1Q6IMI4 303 aa20.15■□□□□ 0.82
RAI1-201ENST00000353383 CCDC178Q5BJE1 867 aa20.15■□□□□ 0.82
RAI1-201ENST00000353383 SLC26A8Q96RN1 970 aa20.15■□□□□ 0.82
RAI1-201ENST00000353383 HOMER2Q9NSB8 354 aa20.15■□□□□ 0.82
RAI1-201ENST00000353383 ERICH4A6NGS2 130 aa20.14■□□□□ 0.82
RAI1-201ENST00000353383 ZNF530Q6P9A1 599 aaPredicted RBP20.14■□□□□ 0.82
RAI1-201ENST00000353383 CNTLNQ9NXG0 1405 aa20.14■□□□□ 0.81
RAI1-201ENST00000353383 ERLIN1O75477 346 aa20.14■□□□□ 0.81
RAI1-201ENST00000353383 FERMT2Q96AC1 680 aa20.14■□□□□ 0.81
RAI1-201ENST00000353383 KLHL10Q6JEL2 608 aa20.14■□□□□ 0.81
RAI1-201ENST00000353383 KRT85P78386 507 aa20.14■□□□□ 0.81
RAI1-201ENST00000353383 DDX11Q96FC9 970 aa20.14■□□□□ 0.81
RAI1-201ENST00000353383 SPATA32Q96LK8 384 aa20.14■□□□□ 0.81
RAI1-201ENST00000353383 PTPRGP23470 1445 aa20.13■□□□□ 0.81
RAI1-201ENST00000353383 BCAR3O75815 825 aa20.13■□□□□ 0.81
RAI1-201ENST00000353383 SERPINA10Q9UK55 444 aa20.13■□□□□ 0.81
RAI1-201ENST00000353383 CCDC96Q2M329 555 aa20.13■□□□□ 0.81
RAI1-201ENST00000353383 AEBP1Q8IUX7 1158 aa20.13■□□□□ 0.81
RAI1-201ENST00000353383 AIDAQ96BJ3 306 aa20.13■□□□□ 0.81
RAI1-201ENST00000353383 CTNNA2P26232 953 aa20.13■□□□□ 0.81
RAI1-201ENST00000353383 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.12■□□□□ 0.813e-8■■■■■ 31
RAI1-201ENST00000353383 TSR2Q969E8 191 aaKnown RBP20.12■□□□□ 0.81
RAI1-201ENST00000353383 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.12■□□□□ 0.812e-9■■■■■ 35.7
RAI1-201ENST00000353383 EXOSC9Q06265 439 aaKnown RBP20.12■□□□□ 0.81
RAI1-201ENST00000353383 BLOC1S2Q6QNY1 142 aa20.12■□□□□ 0.81
RAI1-201ENST00000353383 PRDM11Q9NQV5 511 aa20.12■□□□□ 0.81
RAI1-201ENST00000353383 FILIP1Q7Z7B0 1213 aa20.11■□□□□ 0.81
RAI1-201ENST00000353383 JAKMIP1Q96N16 626 aaKnown RBP20.11■□□□□ 0.81
RAI1-201ENST00000353383 SLC4A8Q2Y0W8 1093 aa20.11■□□□□ 0.81
RAI1-201ENST00000353383 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
RAI1-201ENST00000353383 CACNA2D4Q7Z3S7 1137 aa20.11■□□□□ 0.81
RAI1-201ENST00000353383 PRAM1Q96QH2 718 aa20.11■□□□□ 0.81
RAI1-201ENST00000353383 LARP1Q6PKG0 1096 aaKnown RBP20.1■□□□□ 0.81
RAI1-201ENST00000353383 METTL24Q5JXM2 366 aa20.1■□□□□ 0.81
RAI1-201ENST00000353383 CCDC148Q8NFR7 591 aa20.1■□□□□ 0.81
RAI1-201ENST00000353383 CCDC82Q8N4S0 544 aa20.1■□□□□ 0.81
RAI1-201ENST00000353383 DDX23Q9BUQ8 820 aaKnown RBP20.1■□□□□ 0.81
RAI1-201ENST00000353383 CEP126Q9P2H0 1117 aa20.1■□□□□ 0.81
RAI1-201ENST00000353383 SMC1AQ14683 1233 aaKnown RBP20.1■□□□□ 0.81
RAI1-201ENST00000353383 ECM2O94769 699 aaPredicted RBP20.1■□□□□ 0.81
RAI1-201ENST00000353383 CFAP100Q494V2 611 aa20.1■□□□□ 0.81
RAI1-201ENST00000353383 MTERF4Q7Z6M4 381 aaKnown RBP20.1■□□□□ 0.81
RAI1-201ENST00000353383 HOOK3Q86VS8 718 aa20.1■□□□□ 0.81
RAI1-201ENST00000353383 CAMK4Q16566 473 aa20.09■□□□□ 0.81
RAI1-201ENST00000353383 PDRG1Q9NUG6 133 aa20.09■□□□□ 0.81
RAI1-201ENST00000353383 SRGAP3O43295 1099 aa20.09■□□□□ 0.81
RAI1-201ENST00000353383 DZIP1Q86YF9 867 aaKnown RBP20.09■□□□□ 0.81
RAI1-201ENST00000353383 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
RAI1-201ENST00000353383 ZNF354CQ86Y25 554 aa20.09■□□□□ 0.81
RAI1-201ENST00000353383 TMX1Q9H3N1 280 aa20.09■□□□□ 0.81
RAI1-201ENST00000353383 PABPN1LA6NDY0 278 aaKnown RBP20.09■□□□□ 0.81
RAI1-201ENST00000353383 ARHGAP29Q52LW3 1261 aa20.08■□□□□ 0.81
RAI1-201ENST00000353383 ADAMTS8Q9UP79 889 aa20.08■□□□□ 0.81
RAI1-201ENST00000353383 CCDC88BA6NC98 1476 aa20.08■□□□□ 0.81
RAI1-201ENST00000353383 SPA17Q15506 151 aa20.08■□□□□ 0.8
RAI1-201ENST00000353383 TCP11L2Q8N4U5 519 aa20.08■□□□□ 0.8
RAI1-201ENST00000353383 PUF60Q9UHX1 559 aaKnown RBP20.08■□□□□ 0.8
RAI1-201ENST00000353383 PDZRN3Q9UPQ7 1066 aa20.08■□□□□ 0.8
RAI1-201ENST00000353383 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.8
RAI1-201ENST00000353383 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.8
RAI1-201ENST00000353383 CAVIN4Q5BKX8 364 aa20.08■□□□□ 0.8
RAI1-201ENST00000353383 GIMAP7Q8NHV1 300 aa20.08■□□□□ 0.8
RAI1-201ENST00000353383 CEP131Q9UPN4 1083 aa20.08■□□□□ 0.8
RAI1-201ENST00000353383 IFFO1Q0D2I5 559 aa20.07■□□□□ 0.8
RAI1-201ENST00000353383 VTI1AQ96AJ9 217 aa20.07■□□□□ 0.8
RAI1-201ENST00000353383 ZNF287Q9HBT7 754 aa20.07■□□□□ 0.8
RAI1-201ENST00000353383 CCT4P50991 539 aaKnown RBP20.07■□□□□ 0.8
RAI1-201ENST00000353383 IMMTQ16891 758 aaKnown RBP20.07■□□□□ 0.8
RAI1-201ENST00000353383 CUL5Q93034 780 aa20.07■□□□□ 0.8
RAI1-201ENST00000353383 TSG101Q99816 390 aa20.07■□□□□ 0.8
RAI1-201ENST00000353383 PODXL2Q9NZ53 605 aa20.07■□□□□ 0.8
RAI1-201ENST00000353383 SPTY2D1Q68D10 685 aaPredicted RBP20.07■□□□□ 0.8
RAI1-201ENST00000353383 PPM1EQ8WY54 764 aa20.07■□□□□ 0.8
RAI1-201ENST00000353383 TICAM2Q86XR7 235 aa20.06■□□□□ 0.8
RAI1-201ENST00000353383 WDR33Q9C0J8 1336 aaKnown RBP20.06■□□□□ 0.8
RAI1-201ENST00000353383 USP8P40818 1118 aa20.06■□□□□ 0.8
RAI1-201ENST00000353383 IL1RAPL2Q9NP60 686 aa20.06■□□□□ 0.8
RAI1-201ENST00000353383 MAP3K9P80192 1104 aa20.06■□□□□ 0.8
RAI1-201ENST00000353383 STARD3NLO95772 234 aa20.06■□□□□ 0.8
RAI1-201ENST00000353383 ARL1P40616 181 aaPredicted RBP20.06■□□□□ 0.8
RAI1-201ENST00000353383 ZC3H6P61129 1189 aaKnown RBP20.06■□□□□ 0.8
RAI1-201ENST00000353383 CTNNA3Q9UI47 895 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms