RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 NCBP1Q09161 790 aaKnown RBP12.85□□□□□ -0.35
PKP1-202ENST00000352845 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
PKP1-202ENST00000352845 FAM177BA6PVY3 158 aa12.84□□□□□ -0.35
PKP1-202ENST00000352845 CAMSAP1Q5T5Y3 1602 aa12.84□□□□□ -0.35
PKP1-202ENST00000352845 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
PKP1-202ENST00000352845 DZIP1LQ8IYY4 767 aaKnown RBP12.84□□□□□ -0.35
PKP1-202ENST00000352845 KIAA1524Q8TCG1 905 aa12.84□□□□□ -0.35
PKP1-202ENST00000352845 SIGLEC1Q9BZZ2 1709 aa12.83□□□□□ -0.36
PKP1-202ENST00000352845 MTHFSP49914 203 aa12.83□□□□□ -0.36
PKP1-202ENST00000352845 RNF214Q8ND24 703 aa12.83□□□□□ -0.36
PKP1-202ENST00000352845 KIF18AQ8NI77 898 aa12.83□□□□□ -0.36
PKP1-202ENST00000352845 SLC12A5Q9H2X9 1139 aa12.83□□□□□ -0.36
PKP1-202ENST00000352845 FEZ2Q9UHY8 353 aaPredicted RBP12.83□□□□□ -0.36
PKP1-202ENST00000352845 ANKRD36BQ8N2N9 1353 aa12.83□□□□□ -0.36
PKP1-202ENST00000352845 REREQ9P2R6 1566 aa12.83□□□□□ -0.36
PKP1-202ENST00000352845 SETBP1Q9Y6X0 1596 aa12.82□□□□□ -0.36
PKP1-202ENST00000352845 QRICH2Q9H0J4 1663 aa12.82□□□□□ -0.36
PKP1-202ENST00000352845 SMTNL1A8MU46 457 aa12.81□□□□□ -0.36
PKP1-202ENST00000352845 TRIM27P14373 513 aa12.81□□□□□ -0.36
PKP1-202ENST00000352845 TNNT3P45378 269 aaPredicted RBP12.81□□□□□ -0.36
PKP1-202ENST00000352845 NUCB1Q02818 461 aa12.81□□□□□ -0.36
PKP1-202ENST00000352845 ZNF622Q969S3 477 aaKnown RBP eCLIP12.81□□□□□ -0.36
PKP1-202ENST00000352845 CT47B1P0C2W7 299 aaPredicted RBP12.81□□□□□ -0.36
PKP1-202ENST00000352845 PSEN1P49768 467 aa12.81□□□□□ -0.36
PKP1-202ENST00000352845 TTC12Q9H892 705 aaPredicted RBP12.81□□□□□ -0.36
PKP1-202ENST00000352845 FAM53CQ9NYF3 392 aa12.81□□□□□ -0.36
PKP1-202ENST00000352845 DDX19BQ9UMR2 479 aa12.81□□□□□ -0.36
PKP1-202ENST00000352845 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
PKP1-202ENST00000352845 HDAC5Q9UQL6 1122 aa12.8□□□□□ -0.36
PKP1-202ENST00000352845 ADGRB3O60242 1522 aa12.8□□□□□ -0.36
PKP1-202ENST00000352845 GOLGA6L6A8MZA4 724 aa12.8□□□□□ -0.36
PKP1-202ENST00000352845 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
PKP1-202ENST00000352845 AEBP1Q8IUX7 1158 aa12.8□□□□□ -0.36
PKP1-202ENST00000352845 PAXBP1Q9Y5B6 917 aa12.8□□□□□ -0.36
PKP1-202ENST00000352845 ADGRB1O14514 1584 aa12.79□□□□□ -0.36
PKP1-202ENST00000352845 ADCY5O95622 1261 aa12.79□□□□□ -0.36
PKP1-202ENST00000352845 EXOSC9Q06265 439 aaKnown RBP12.78□□□□□ -0.36
PKP1-202ENST00000352845 ZNF397Q8NF99 534 aaPredicted RBP12.78□□□□□ -0.36
PKP1-202ENST00000352845 SSH1Q8WYL5 1049 aa12.78□□□□□ -0.36
PKP1-202ENST00000352845 NOS1P29475 1434 aa12.78□□□□□ -0.36
PKP1-202ENST00000352845 ZBTB7CA1YPR0 619 aa12.78□□□□□ -0.36
PKP1-202ENST00000352845 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
PKP1-202ENST00000352845 CYP2C19P33261 490 aa12.78□□□□□ -0.36
PKP1-202ENST00000352845 CERS3Q8IU89 383 aa12.78□□□□□ -0.36
PKP1-202ENST00000352845 REC8O95072 547 aa12.77□□□□□ -0.36
PKP1-202ENST00000352845 SMC4Q9NTJ3 1288 aa12.77□□□□□ -0.36
PKP1-202ENST00000352845 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.36
PKP1-202ENST00000352845 APPP05067 770 aa12.77□□□□□ -0.37
PKP1-202ENST00000352845 ATF7IPQ6VMQ6 1270 aa12.77□□□□□ -0.37
PKP1-202ENST00000352845 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.37
PKP1-202ENST00000352845 C17orf53Q8N3J3 647 aaPredicted RBP12.77□□□□□ -0.37
PKP1-202ENST00000352845 USP25Q9UHP3 1055 aa12.77□□□□□ -0.37
PKP1-202ENST00000352845 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
PKP1-202ENST00000352845 SOX12O15370 315 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 SLFNL1Q499Z3 407 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 TBC1D9Q6ZT07 1266 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 ITPRIPQ8IWB1 547 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 CFAP53Q96M91 514 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
PKP1-202ENST00000352845 RASSF4Q9H2L5 321 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 BRMS1Q9HCU9 246 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 TRAK1Q9UPV9 953 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 ST18O60284 1047 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 U2AF1L5P0DN76 240 aaPredicted RBP12.76□□□□□ -0.37
PKP1-202ENST00000352845 U2AF1Q01081 240 aaKnown RBP eCLIP12.76□□□□□ -0.37
PKP1-202ENST00000352845 MUM1L1Q5H9M0 696 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 PIK3C2BO00750 1634 aa12.76□□□□□ -0.37
PKP1-202ENST00000352845 PPLO60437 1756 aa12.75□□□□□ -0.37
PKP1-202ENST00000352845 ERICH4A6NGS2 130 aa12.75□□□□□ -0.37
PKP1-202ENST00000352845 KDM4AO75164 1064 aa12.75□□□□□ -0.37
PKP1-202ENST00000352845 RAD51AP2Q09MP3 1159 aa12.75□□□□□ -0.37
PKP1-202ENST00000352845 NOB1Q9ULX3 412 aaKnown RBP12.75□□□□□ -0.37
PKP1-202ENST00000352845 COL3A1P02461 1466 aaPredicted RBP12.75□□□□□ -0.37
PKP1-202ENST00000352845 RAD50Q92878 1312 aa12.75□□□□□ -0.37
PKP1-202ENST00000352845 CDC45O75419 566 aa12.74□□□□□ -0.37
PKP1-202ENST00000352845 ZDHHC9Q9Y397 364 aa12.74□□□□□ -0.37
PKP1-202ENST00000352845 TULP4Q9NRJ4 1543 aa12.74□□□□□ -0.37
PKP1-202ENST00000352845 NOP2P46087 812 aaKnown RBP12.74□□□□□ -0.37
PKP1-202ENST00000352845 HNRNPH2P55795 449 aaKnown RBP12.74□□□□□ -0.37
PKP1-202ENST00000352845 CCDC112Q8NEF3 446 aa12.74□□□□□ -0.37
PKP1-202ENST00000352845 MYCBPQ99417 103 aaPredicted RBP12.74□□□□□ -0.37
PKP1-202ENST00000352845 C14orf93Q9H972 538 aaKnown RBP12.74□□□□□ -0.37
PKP1-202ENST00000352845 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
PKP1-202ENST00000352845 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
PKP1-202ENST00000352845 GTF2A1P52655 376 aaPredicted RBP12.73□□□□□ -0.37
PKP1-202ENST00000352845 PKP1Q13835 747 aa12.73□□□□□ -0.37
PKP1-202ENST00000352845 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
PKP1-202ENST00000352845 KIF1BPQ96EK5 621 aa12.73□□□□□ -0.37
PKP1-202ENST00000352845 NOL10Q9BSC4 688 aaKnown RBP12.73□□□□□ -0.37
PKP1-202ENST00000352845 RSPH14Q9UHP6 348 aa12.73□□□□□ -0.37
PKP1-202ENST00000352845 NSD2O96028 1365 aa12.73□□□□□ -0.37
PKP1-202ENST00000352845 PREX1Q8TCU6 1659 aa12.72□□□□□ -0.37
PKP1-202ENST00000352845 GCC1Q96CN9 775 aa12.72□□□□□ -0.37
PKP1-202ENST00000352845 NCAPGQ9BPX3 1015 aa12.72□□□□□ -0.37
PKP1-202ENST00000352845 LNPKQ9C0E8 428 aa12.72□□□□□ -0.37
PKP1-202ENST00000352845 PYCARDQ9ULZ3 195 aa12.72□□□□□ -0.37
PKP1-202ENST00000352845 CCDC183Q5T5S1 534 aa12.72□□□□□ -0.37
PKP1-202ENST00000352845 TXLNBQ8N3L3 684 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms