RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RBM27Q9P2N5 1060 aaKnown RBP22.95■■□□□ 1.27
SCARF1-202ENST00000348987 REREQ9P2R6 1566 aa22.95■■□□□ 1.27
SCARF1-202ENST00000348987 PPP6R1Q9UPN7 881 aa22.95■■□□□ 1.27
SCARF1-202ENST00000348987 MTERF4Q7Z6M4 381 aaKnown RBP22.95■■□□□ 1.26
SCARF1-202ENST00000348987 KIF20BQ96Q89 1820 aa22.95■■□□□ 1.26
SCARF1-202ENST00000348987 CSPP1Q1MSJ5 1256 aa22.95■■□□□ 1.26
SCARF1-202ENST00000348987 FAM83GA6ND36 823 aa22.94■■□□□ 1.26
SCARF1-202ENST00000348987 WASLO00401 505 aaPredicted RBP22.94■■□□□ 1.26
SCARF1-202ENST00000348987 ZHX1Q9UKY1 873 aaPredicted RBP22.94■■□□□ 1.26
SCARF1-202ENST00000348987 SPATA31D1Q6ZQQ2 1576 aa22.94■■□□□ 1.26
SCARF1-202ENST00000348987 MBIPQ9NS73 344 aa22.94■■□□□ 1.26
SCARF1-202ENST00000348987 ZBTB7BO15156 539 aaPredicted RBP22.93■■□□□ 1.26
SCARF1-202ENST00000348987 PRPF40AO75400 957 aaKnown RBP22.93■■□□□ 1.26
SCARF1-202ENST00000348987 MRPL50Q8N5N7 158 aaKnown RBP22.93■■□□□ 1.26
SCARF1-202ENST00000348987 PPIP5K1Q6PFW1 1433 aa22.92■■□□□ 1.26
SCARF1-202ENST00000348987 ATP7BP35670 1465 aa22.92■■□□□ 1.26
SCARF1-202ENST00000348987 CDC42BPGQ6DT37 1551 aa22.92■■□□□ 1.26
SCARF1-202ENST00000348987 DCTN1Q14203 1278 aa22.92■■□□□ 1.26
SCARF1-202ENST00000348987 SASS6Q6UVJ0 657 aa22.92■■□□□ 1.26
SCARF1-202ENST00000348987 MAP2P11137 1827 aaKnown RBP22.92■■□□□ 1.26
SCARF1-202ENST00000348987 NUCB2P80303 420 aa22.91■■□□□ 1.26
SCARF1-202ENST00000348987 GPT2Q8TD30 523 aa22.91■■□□□ 1.26
SCARF1-202ENST00000348987 CPSF1Q10570 1443 aaKnown RBP22.91■■□□□ 1.26
SCARF1-202ENST00000348987 C8orf58Q8NAV2 365 aa22.9■■□□□ 1.26
SCARF1-202ENST00000348987 NUDT16Q96DE0 195 aaKnown RBP22.9■■□□□ 1.26
SCARF1-202ENST00000348987 ZBTB7CA1YPR0 619 aa22.89■■□□□ 1.26
SCARF1-202ENST00000348987 CYP2E1P05181 493 aaPredicted RBP22.89■■□□□ 1.26
SCARF1-202ENST00000348987 MCM5P33992 734 aa22.89■■□□□ 1.25
SCARF1-202ENST00000348987 SIRT2Q8IXJ6 389 aa22.89■■□□□ 1.25
SCARF1-202ENST00000348987 ZNF853P0CG23 659 aa22.88■■□□□ 1.25
SCARF1-202ENST00000348987 BRPF1P55201 1214 aaPredicted RBP22.88■■□□□ 1.25
SCARF1-202ENST00000348987 DLC1Q96QB1 1528 aa22.88■■□□□ 1.25
SCARF1-202ENST00000348987 SYCE3A1L190 88 aa22.87■■□□□ 1.25
SCARF1-202ENST00000348987 EDC4Q6P2E9 1401 aaKnown RBP22.87■■□□□ 1.25
SCARF1-202ENST00000348987 CHAMP1Q96JM3 812 aa22.87■■□□□ 1.25
SCARF1-202ENST00000348987 CCDC39Q9UFE4 941 aa22.87■■□□□ 1.25
SCARF1-202ENST00000348987 GNAI1P63096 354 aa22.87■■□□□ 1.25
SCARF1-202ENST00000348987 TWISTNBQ3B726 338 aaPredicted RBP22.87■■□□□ 1.25
SCARF1-202ENST00000348987 IFT57Q9NWB7 429 aa22.87■■□□□ 1.25
SCARF1-202ENST00000348987 CPS1P31327 1500 aa22.87■■□□□ 1.25
SCARF1-202ENST00000348987 TMEM63CQ9P1W3 806 aa22.86■■□□□ 1.25
SCARF1-202ENST00000348987 JARID2Q92833 1246 aaPredicted RBP22.86■■□□□ 1.25
SCARF1-202ENST00000348987 SETD1AO15047 1707 aaKnown RBP22.85■■□□□ 1.25
SCARF1-202ENST00000348987 LRSAM1Q6UWE0 723 aa22.85■■□□□ 1.25
SCARF1-202ENST00000348987 RNF214Q8ND24 703 aa22.85■■□□□ 1.25
SCARF1-202ENST00000348987 ZNF428Q96B54 188 aa22.85■■□□□ 1.25
SCARF1-202ENST00000348987 GCC1Q96CN9 775 aa22.85■■□□□ 1.25
SCARF1-202ENST00000348987 COG3Q96JB2 828 aa22.85■■□□□ 1.25
SCARF1-202ENST00000348987 SLC26A8Q96RN1 970 aa22.85■■□□□ 1.25
SCARF1-202ENST00000348987 CCDC94Q9BW85 323 aaPredicted RBP22.85■■□□□ 1.25
SCARF1-202ENST00000348987 CDC45O75419 566 aa22.85■■□□□ 1.25
SCARF1-202ENST00000348987 RABEP1Q15276 862 aa22.85■■□□□ 1.25
SCARF1-202ENST00000348987 AEBP1Q8IUX7 1158 aa22.85■■□□□ 1.25
SCARF1-202ENST00000348987 CCDC61Q9Y6R9 512 aa22.85■■□□□ 1.25
SCARF1-202ENST00000348987 NSFL1CQ9UNZ2 370 aaKnown RBP22.84■■□□□ 1.25
SCARF1-202ENST00000348987 LTKP29376 864 aa22.84■■□□□ 1.25
SCARF1-202ENST00000348987 ZGPATQ8N5A5 531 aaKnown RBP22.84■■□□□ 1.25
SCARF1-202ENST00000348987 KRT24Q2M2I5 525 aa22.83■■□□□ 1.25
SCARF1-202ENST00000348987 PRR36Q9H6K5 1346 aa22.83■■□□□ 1.25
SCARF1-202ENST00000348987 CFAP44Q96MT7 982 aa22.83■■□□□ 1.25
SCARF1-202ENST00000348987 NRXN3Q9Y4C0 1643 aa22.82■■□□□ 1.24
SCARF1-202ENST00000348987 TNRQ92752 1358 aa22.82■■□□□ 1.24
SCARF1-202ENST00000348987 PTCH1Q13635 1447 aa22.82■■□□□ 1.24
SCARF1-202ENST00000348987 DMTNQ08495 405 aa22.82■■□□□ 1.24
SCARF1-202ENST00000348987 ARHGAP45Q92619 1136 aa22.82■■□□□ 1.24
SCARF1-202ENST00000348987 CDK12Q9NYV4 1490 aaPredicted RBP22.81■■□□□ 1.24
SCARF1-202ENST00000348987 SOX12O15370 315 aa22.81■■□□□ 1.24
SCARF1-202ENST00000348987 ZDHHC9Q9Y397 364 aa22.81■■□□□ 1.24
SCARF1-202ENST00000348987 ABCC4O15439 1325 aa22.81■■□□□ 1.24
SCARF1-202ENST00000348987 GSPT1P15170 499 aaKnown RBP22.81■■□□□ 1.24
SCARF1-202ENST00000348987 ZSCAN20P17040 1043 aaPredicted RBP22.81■■□□□ 1.24
SCARF1-202ENST00000348987 TSC1Q92574 1164 aa22.81■■□□□ 1.24
SCARF1-202ENST00000348987 PIK3R4Q99570 1358 aa22.81■■□□□ 1.24
SCARF1-202ENST00000348987 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.8■■□□□ 1.24
SCARF1-202ENST00000348987 AATKQ6ZMQ8 1374 aa22.8■■□□□ 1.24
SCARF1-202ENST00000348987 PTMAP06454 111 aaKnown RBP22.79■■□□□ 1.24
SCARF1-202ENST00000348987 DNTTIP2Q5QJE6 756 aaKnown RBP22.79■■□□□ 1.24
SCARF1-202ENST00000348987 ROBO2Q9HCK4 1378 aa22.79■■□□□ 1.24
SCARF1-202ENST00000348987 FOXD4L5Q5VV16 416 aaPredicted RBP22.78■■□□□ 1.24
SCARF1-202ENST00000348987 FOXD4L4Q8WXT5 416 aaPredicted RBP22.78■■□□□ 1.24
SCARF1-202ENST00000348987 KIAA2012Q0VF49 1180 aa22.78■■□□□ 1.24
SCARF1-202ENST00000348987 CWC22Q9HCG8 908 aaKnown RBP22.78■■□□□ 1.24
SCARF1-202ENST00000348987 UTP14CQ5TAP6 766 aaKnown RBP22.78■■□□□ 1.24
SCARF1-202ENST00000348987 SULT6B1Q6IMI4 303 aa22.77■■□□□ 1.24
SCARF1-202ENST00000348987 MYRIPQ8NFW9 859 aa22.77■■□□□ 1.24
SCARF1-202ENST00000348987 USP26Q9BXU7 913 aa22.77■■□□□ 1.24
SCARF1-202ENST00000348987 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.77■■□□□ 1.24
SCARF1-202ENST00000348987 MPNDQ8N594 471 aa22.77■■□□□ 1.23
SCARF1-202ENST00000348987 TMEM2Q9UHN6 1383 aa22.76■■□□□ 1.23
SCARF1-202ENST00000348987 EIF4A2Q14240 407 aaKnown RBP22.76■■□□□ 1.23
SCARF1-202ENST00000348987 MCM10Q7L590 875 aa22.75■■□□□ 1.23
SCARF1-202ENST00000348987 CBX1P83916 185 aa22.75■■□□□ 1.23
SCARF1-202ENST00000348987 ZNF710Q8N1W2 664 aa22.75■■□□□ 1.23
SCARF1-202ENST00000348987 DLG5Q8TDM6 1919 aa22.74■■□□□ 1.23
SCARF1-202ENST00000348987 LMOD3Q0VAK6 560 aa22.73■■□□□ 1.23
SCARF1-202ENST00000348987 PLEKHM2Q8IWE5 1019 aa22.73■■□□□ 1.23
SCARF1-202ENST00000348987 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
SCARF1-202ENST00000348987 ST18O60284 1047 aa22.72■■□□□ 1.23
SCARF1-202ENST00000348987 ZNF830Q96NB3 372 aaPredicted RBP22.72■■□□□ 1.23
SCARF1-202ENST00000348987 FAM177BA6PVY3 158 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms