RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 MRPL50Q8N5N7 158 aaKnown RBP26.94■■□□□ 1.9
PTPN18-202ENST00000347849 KIF16BQ96L93 1317 aa26.93■■□□□ 1.9
PTPN18-202ENST00000347849 MIS18AQ9NYP9 233 aa26.92■■□□□ 1.9
PTPN18-202ENST00000347849 USHBP1Q8N6Y0 703 aa26.9■■□□□ 1.9
PTPN18-202ENST00000347849 NWD1Q149M9 1564 aa26.89■■□□□ 1.9
PTPN18-202ENST00000347849 CHL1O00533 1208 aa26.89■■□□□ 1.9
PTPN18-202ENST00000347849 HSPA2P54652 639 aa26.89■■□□□ 1.9
PTPN18-202ENST00000347849 AAMPQ13685 434 aa26.89■■□□□ 1.9
PTPN18-202ENST00000347849 SLKQ9H2G2 1235 aaPredicted RBP26.89■■□□□ 1.9
PTPN18-202ENST00000347849 IPO8O15397 1037 aaKnown RBP26.89■■□□□ 1.89
PTPN18-202ENST00000347849 BRPF1P55201 1214 aaPredicted RBP26.89■■□□□ 1.89
PTPN18-202ENST00000347849 BECN1Q14457 450 aa26.89■■□□□ 1.89
PTPN18-202ENST00000347849 ZNF428Q96B54 188 aa26.89■■□□□ 1.89
PTPN18-202ENST00000347849 USP54Q70EL1 1684 aa26.88■■□□□ 1.89
PTPN18-202ENST00000347849 ZBTB7CA1YPR0 619 aa26.88■■□□□ 1.89
PTPN18-202ENST00000347849 DDX19BQ9UMR2 479 aa26.88■■□□□ 1.89
PTPN18-202ENST00000347849 CRB1P82279 1406 aa26.87■■□□□ 1.89
PTPN18-202ENST00000347849 ZBTB40Q9NUA8 1239 aa26.85■■□□□ 1.89
PTPN18-202ENST00000347849 KIF24Q5T7B8 1368 aa26.85■■□□□ 1.89
PTPN18-202ENST00000347849 NFAT5O94916 1531 aa26.85■■□□□ 1.89
PTPN18-202ENST00000347849 LMOD2Q6P5Q4 547 aa26.84■■□□□ 1.89
PTPN18-202ENST00000347849 IP6K1Q92551 441 aa26.82■■□□□ 1.88
PTPN18-202ENST00000347849 RWDD1Q9H446 243 aaPredicted RBP26.82■■□□□ 1.88
PTPN18-202ENST00000347849 C19orf44Q9H6X5 657 aa26.82■■□□□ 1.88
PTPN18-202ENST00000347849 PDZRN3Q9UPQ7 1066 aa26.82■■□□□ 1.88
PTPN18-202ENST00000347849 VIRMAQ69YN4 1812 aaKnown RBP26.81■■□□□ 1.88
PTPN18-202ENST00000347849 DDX17Q92841 729 aaKnown RBP26.81■■□□□ 1.88
PTPN18-202ENST00000347849 LTN1O94822 1766 aa26.81■■□□□ 1.88
PTPN18-202ENST00000347849 NBPF6Q5VWK0 638 aa26.8■■□□□ 1.88
PTPN18-202ENST00000347849 RTF1Q92541 710 aaKnown RBP26.8■■□□□ 1.88
PTPN18-202ENST00000347849 NBPF4Q96M43 638 aa26.8■■□□□ 1.88
PTPN18-202ENST00000347849 C1orf167Q5SNV9 1468 aa26.8■■□□□ 1.88
PTPN18-202ENST00000347849 TMEM94Q12767 1356 aa26.79■■□□□ 1.88
PTPN18-202ENST00000347849 GCP02774 474 aa26.79■■□□□ 1.88
PTPN18-202ENST00000347849 GAS2L2Q8NHY3 880 aa26.79■■□□□ 1.88
PTPN18-202ENST00000347849 KRT28Q7Z3Y7 464 aa26.79■■□□□ 1.88
PTPN18-202ENST00000347849 ARHGAP45Q92619 1136 aa26.79■■□□□ 1.88
PTPN18-202ENST00000347849 UPF2Q9HAU5 1272 aaKnown RBP26.78■■□□□ 1.88
PTPN18-202ENST00000347849 RTL1A6NKG5 1358 aa26.78■■□□□ 1.88
PTPN18-202ENST00000347849 LRRC59Q96AG4 307 aaKnown RBP26.78■■□□□ 1.88
PTPN18-202ENST00000347849 ZBTB7BO15156 539 aaPredicted RBP26.77■■□□□ 1.88
PTPN18-202ENST00000347849 STRCP1A6NGW2 1772 aa26.77■■□□□ 1.88
PTPN18-202ENST00000347849 KCNH5Q8NCM2 988 aa26.76■■□□□ 1.87
PTPN18-202ENST00000347849 ABCC4O15439 1325 aa26.76■■□□□ 1.87
PTPN18-202ENST00000347849 C1orf115Q9H7X2 142 aa26.76■■□□□ 1.87
PTPN18-202ENST00000347849 TSPYL4Q9UJ04 414 aa26.76■■□□□ 1.87
PTPN18-202ENST00000347849 IL17REQ8NFR9 667 aa26.75■■□□□ 1.87
PTPN18-202ENST00000347849 MSH6P52701 1360 aa26.75■■□□□ 1.87
PTPN18-202ENST00000347849 HDAC1Q13547 482 aaPredicted RBP26.75■■□□□ 1.87
PTPN18-202ENST00000347849 ANTXR1Q9H6X2 564 aa26.75■■□□□ 1.87
PTPN18-202ENST00000347849 GNAT3A8MTJ3 354 aa26.74■■□□□ 1.87
PTPN18-202ENST00000347849 FAM43AQ8N2R8 423 aa26.74■■□□□ 1.87
PTPN18-202ENST00000347849 EIF5BO60841 1220 aaKnown RBP26.74■■□□□ 1.87
PTPN18-202ENST00000347849 ARHGEF25Q86VW2 580 aa26.74■■□□□ 1.87
PTPN18-202ENST00000347849 KIAA0232Q92628 1395 aa26.74■■□□□ 1.87
PTPN18-202ENST00000347849 TBC1D32Q96NH3 1257 aa26.73■■□□□ 1.87
PTPN18-202ENST00000347849 TBC1D2Q9BYX2 928 aa26.72■■□□□ 1.87
PTPN18-202ENST00000347849 AXIN2Q9Y2T1 843 aa26.72■■□□□ 1.87
PTPN18-202ENST00000347849 ATF3P18847 181 aa26.71■■□□□ 1.87
PTPN18-202ENST00000347849 MST1RQ04912 1400 aa26.71■■□□□ 1.87
PTPN18-202ENST00000347849 TRPM3Q9HCF6 1732 aaPredicted RBP26.7■■□□□ 1.86
PTPN18-202ENST00000347849 SPRYD3Q8NCJ5 442 aa26.7■■□□□ 1.86
PTPN18-202ENST00000347849 MAP3K5Q99683 1374 aa26.69■■□□□ 1.86
PTPN18-202ENST00000347849 RGS12O14924 1447 aa26.68■■□□□ 1.86
PTPN18-202ENST00000347849 API5Q9BZZ5 524 aaKnown RBP26.68■■□□□ 1.86
PTPN18-202ENST00000347849 SLIT3O75094 1523 aa26.68■■□□□ 1.86
PTPN18-202ENST00000347849 HTATSF1O43719 755 aaKnown RBP26.67■■□□□ 1.86
PTPN18-202ENST00000347849 RGPD2P0DJD1 1756 aa26.67■■□□□ 1.86
PTPN18-202ENST00000347849 SLC4A2P04920 1241 aa26.67■■□□□ 1.86
PTPN18-202ENST00000347849 SMC5Q8IY18 1101 aa26.67■■□□□ 1.86
PTPN18-202ENST00000347849 KDM4FA0A1W2PPD8 638 aa26.66■■□□□ 1.86
PTPN18-202ENST00000347849 G2E3Q7L622 706 aa26.66■■□□□ 1.86
PTPN18-202ENST00000347849 ZC3H6P61129 1189 aaKnown RBP26.66■■□□□ 1.86
PTPN18-202ENST00000347849 SIRT2Q8IXJ6 389 aa26.65■■□□□ 1.86
PTPN18-202ENST00000347849 LGR6Q9HBX8 967 aa26.64■■□□□ 1.86
PTPN18-202ENST00000347849 ANKRD24Q8TF21 1146 aa26.64■■□□□ 1.85
PTPN18-202ENST00000347849 LRRC37A3O60309 1634 aa26.64■■□□□ 1.85
PTPN18-202ENST00000347849 NECTIN2Q92692 538 aa26.63■■□□□ 1.85
PTPN18-202ENST00000347849 L1TD1Q5T7N2 865 aaKnown RBP26.62■■□□□ 1.85
PTPN18-202ENST00000347849 ARXQ96QS3 562 aa26.62■■□□□ 1.85
PTPN18-202ENST00000347849 CABLES1Q8TDN4 633 aa26.62■■□□□ 1.85
PTPN18-202ENST00000347849 PHRF1Q9P1Y6 1649 aaKnown RBP26.62■■□□□ 1.85
PTPN18-202ENST00000347849 KIF1AQ12756 1690 aa26.61■■□□□ 1.85
PTPN18-202ENST00000347849 HAP1P54257 671 aaPredicted RBP26.6■■□□□ 1.85
PTPN18-202ENST00000347849 TAF7Q15545 349 aaPredicted RBP26.6■■□□□ 1.85
PTPN18-202ENST00000347849 MED1Q15648 1581 aaPredicted RBP26.6■■□□□ 1.85
PTPN18-202ENST00000347849 INTS3Q68E01 1043 aaKnown RBP26.6■■□□□ 1.85
PTPN18-202ENST00000347849 F6X3S4 739 aa26.59■■□□□ 1.85
PTPN18-202ENST00000347849 LNPKQ9C0E8 428 aa26.58■■□□□ 1.85
PTPN18-202ENST00000347849 CADPS2Q86UW7 1296 aa26.57■■□□□ 1.84
PTPN18-202ENST00000347849 CEMIPQ8WUJ3 1361 aa26.57■■□□□ 1.84
PTPN18-202ENST00000347849 MFAP1P55081 439 aaKnown RBP26.57■■□□□ 1.84
PTPN18-202ENST00000347849 C22orf23Q9BZE7 217 aa26.57■■□□□ 1.84
PTPN18-202ENST00000347849 ALS2Q96Q42 1657 aa26.56■■□□□ 1.84
PTPN18-202ENST00000347849 NUCB1Q02818 461 aa26.56■■□□□ 1.84
PTPN18-202ENST00000347849 ZNF530Q6P9A1 599 aaPredicted RBP26.56■■□□□ 1.84
PTPN18-202ENST00000347849 MPRIPQ6WCQ1 1025 aa26.56■■□□□ 1.84
PTPN18-202ENST00000347849 DCCP43146 1447 aa26.56■■□□□ 1.84
PTPN18-202ENST00000347849 PTPRCP08575 1304 aa26.56■■□□□ 1.84
PTPN18-202ENST00000347849 PXDNQ92626 1479 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 211.8 ms