RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 GOPCQ9HD26 462 aa13.97□□□□□ -0.17
CACNA1C-204ENST00000347598 ANKIB1Q9P2G1 1089 aa13.97□□□□□ -0.17
CACNA1C-204ENST00000347598 TTC16Q8NEE8 873 aa13.97□□□□□ -0.17
CACNA1C-204ENST00000347598 ABCF2Q9UG63 623 aa13.97□□□□□ -0.17
CACNA1C-204ENST00000347598 CTNNBL1Q8WYA6 563 aaPredicted RBP13.97□□□□□ -0.17
CACNA1C-204ENST00000347598 IDH1O75874 414 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-204ENST00000347598 DHX8Q14562 1220 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-204ENST00000347598 LARP1BQ659C4 914 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-204ENST00000347598 CEP63Q96MT8 703 aa13.96□□□□□ -0.17
CACNA1C-204ENST00000347598 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-204ENST00000347598 WASF1Q92558 559 aa13.96□□□□□ -0.17
CACNA1C-204ENST00000347598 CEP131Q9UPN4 1083 aa13.96□□□□□ -0.17
CACNA1C-204ENST00000347598 CUL5Q93034 780 aa13.96□□□□□ -0.18
CACNA1C-204ENST00000347598 TSG101Q99816 390 aa13.96□□□□□ -0.18
CACNA1C-204ENST00000347598 MKNK2Q9HBH9 465 aa13.96□□□□□ -0.18
CACNA1C-204ENST00000347598 PABPN1LA6NDY0 278 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 CCT4P50991 539 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 CCDC148Q8NFR7 591 aa13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 CCDC96Q2M329 555 aa13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 AIDAQ96BJ3 306 aa13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 ZNF287Q9HBT7 754 aa13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 RBM10P98175 930 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 MPNDQ8N594 471 aa13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 PDRG1Q9NUG6 133 aa13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 EXOSC9Q06265 439 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 CCDC102AQ96A19 550 aa13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 CTNNA3Q9UI47 895 aa13.95□□□□□ -0.18
CACNA1C-204ENST00000347598 CCDC178Q5BJE1 867 aa13.94□□□□□ -0.18
CACNA1C-204ENST00000347598 SULT6B1Q6IMI4 303 aa13.94□□□□□ -0.18
CACNA1C-204ENST00000347598 SPATA32Q96LK8 384 aa13.94□□□□□ -0.18
CACNA1C-204ENST00000347598 KRT85P78386 507 aa13.94□□□□□ -0.18
CACNA1C-204ENST00000347598 MTERF4Q7Z6M4 381 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-204ENST00000347598 MINDY4BA8MYZ0 360 aa13.94□□□□□ -0.18
CACNA1C-204ENST00000347598 AAMPQ13685 434 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 CAVIN4Q5BKX8 364 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 CWC27Q6UX04 472 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 PRAM1Q96QH2 718 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 ZNF652Q9Y2D9 606 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 CEP126Q9P2H0 1117 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 CFAP45Q9UL16 551 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 GCC1Q96CN9 775 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 PRDM11Q9NQV5 511 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 IMMTQ16891 758 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 METTL24Q5JXM2 366 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 LARP1Q6PKG0 1096 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 UBE4AQ14139 1066 aa13.93□□□□□ -0.18
CACNA1C-204ENST00000347598 XPCQ01831 940 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 BLOC1S2Q6QNY1 142 aa13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 PUS7Q96PZ0 661 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 EHMT1Q9H9B1 1298 aa13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 RRBP1Q9P2E9 1410 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 STARD3NLO95772 234 aa13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 MRPS9P82933 396 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 JAKMIP1Q96N16 626 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 TNNT1P13805 278 aa13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 SPA17Q15506 151 aa13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 PDZRN3Q9UPQ7 1066 aa13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 GSTTP1A0A1W2PQM5 241 aa13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 SMTNL1A8MU46 457 aa13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 DZIP1Q86YF9 867 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 PPM1EQ8WY54 764 aa13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 CTNNA2P26232 953 aa13.92□□□□□ -0.18
CACNA1C-204ENST00000347598 CDK19Q9BWU1 502 aa13.91□□□□□ -0.18
CACNA1C-204ENST00000347598 BCAR3O75815 825 aa13.91□□□□□ -0.18
CACNA1C-204ENST00000347598 WDR33Q9C0J8 1336 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-204ENST00000347598 RPGRQ92834 1020 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-204ENST00000347598 BCCIPQ9P287 314 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNA1C-204ENST00000347598 MACROD2A1Z1Q3 448 aa13.91□□□□□ -0.18
CACNA1C-204ENST00000347598 CACNA2D4Q7Z3S7 1137 aa13.91□□□□□ -0.18
CACNA1C-204ENST00000347598 UPF3BQ9BZI7 483 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-204ENST00000347598 HOOK3Q86VS8 718 aa13.91□□□□□ -0.18
CACNA1C-204ENST00000347598 DDX23Q9BUQ8 820 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-204ENST00000347598 HMGB2P26583 209 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-204ENST00000347598 GRM1Q13255 1194 aa13.9□□□□□ -0.18
CACNA1C-204ENST00000347598 TRMT1LQ7Z2T5 733 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-204ENST00000347598 TCP11L2Q8N4U5 519 aa13.9□□□□□ -0.18
CACNA1C-204ENST00000347598 SSX2IPQ9Y2D8 614 aa13.9□□□□□ -0.18
CACNA1C-204ENST00000347598 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.18
CACNA1C-204ENST00000347598 FKBP15Q5T1M5 1219 aa13.9□□□□□ -0.18
CACNA1C-204ENST00000347598 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.9□□□□□ -0.18
CACNA1C-204ENST00000347598 ZNF444Q8N0Y2 327 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-204ENST00000347598 TSR2Q969E8 191 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-204ENST00000347598 DDX11Q96FC9 970 aa13.89□□□□□ -0.19
CACNA1C-204ENST00000347598 ADAMTS8Q9UP79 889 aa13.89□□□□□ -0.19
CACNA1C-204ENST00000347598 ZNF354CQ86Y25 554 aa13.89□□□□□ -0.19
CACNA1C-204ENST00000347598 THEMISQ8N1K5 641 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-204ENST00000347598 VTI1AQ96AJ9 217 aa13.89□□□□□ -0.19
CACNA1C-204ENST00000347598 SRGAP3O43295 1099 aa13.88□□□□□ -0.19
CACNA1C-204ENST00000347598 DNA2P51530 1060 aa13.88□□□□□ -0.19
CACNA1C-204ENST00000347598 ARHGAP29Q52LW3 1261 aa13.88□□□□□ -0.19
CACNA1C-204ENST00000347598 GIMAP7Q8NHV1 300 aa13.88□□□□□ -0.19
CACNA1C-204ENST00000347598 IFFO1Q0D2I5 559 aa13.88□□□□□ -0.19
CACNA1C-204ENST00000347598 GIGYF2Q6Y7W6 1299 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-204ENST00000347598 LMAN1P49257 510 aa13.88□□□□□ -0.19
CACNA1C-204ENST00000347598 MAP3K9P80192 1104 aa13.87□□□□□ -0.19
CACNA1C-204ENST00000347598 CFAP100Q494V2 611 aa13.87□□□□□ -0.19
CACNA1C-204ENST00000347598 NUP62CLQ9H1M0 184 aa13.87□□□□□ -0.19
CACNA1C-204ENST00000347598 CASQ1P31415 396 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms