RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 DCTPP1Q9H773 170 aa18.15■□□□□ 0.5
ARHGEF1-202ENST00000347545 HDGFP51858 240 aaKnown RBP18.14■□□□□ 0.5
ARHGEF1-202ENST00000347545 MSH6P52701 1360 aa18.14■□□□□ 0.5
ARHGEF1-202ENST00000347545 KIAA0232Q92628 1395 aa18.14■□□□□ 0.5
ARHGEF1-202ENST00000347545 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
ARHGEF1-202ENST00000347545 MARF1Q9Y4F3 1742 aaKnown RBP18.14■□□□□ 0.49
ARHGEF1-202ENST00000347545 UBE2Q2Q8WVN8 375 aa18.14■□□□□ 0.49
ARHGEF1-202ENST00000347545 PIK3C2AO00443 1686 aa18.14■□□□□ 0.49
ARHGEF1-202ENST00000347545 FSD2A1L4K1 749 aa18.13■□□□□ 0.49
ARHGEF1-202ENST00000347545 C16orf71Q8IYS4 520 aaPredicted RBP18.13■□□□□ 0.49
ARHGEF1-202ENST00000347545 ANKRD44Q8N8A2 993 aa18.12■□□□□ 0.49
ARHGEF1-202ENST00000347545 RTL1A6NKG5 1358 aa18.12■□□□□ 0.49
ARHGEF1-202ENST00000347545 OTUD7AQ8TE49 926 aaPredicted RBP18.12■□□□□ 0.49
ARHGEF1-202ENST00000347545 CEP170BQ9Y4F5 1589 aaPredicted RBP18.12■□□□□ 0.49
ARHGEF1-202ENST00000347545 MAP3K19Q56UN5 1328 aa18.11■□□□□ 0.49
ARHGEF1-202ENST00000347545 LRRC37A3O60309 1634 aa18.11■□□□□ 0.49
ARHGEF1-202ENST00000347545 FOXO3O43524 673 aa18.11■□□□□ 0.49
ARHGEF1-202ENST00000347545 TRAK2O60296 914 aa18.11■□□□□ 0.49
ARHGEF1-202ENST00000347545 CEP85Q6P2H3 762 aa18.11■□□□□ 0.49
ARHGEF1-202ENST00000347545 CDC45O75419 566 aa18.1■□□□□ 0.49
ARHGEF1-202ENST00000347545 GZF1Q9H116 711 aaPredicted RBP18.1■□□□□ 0.49
ARHGEF1-202ENST00000347545 ARHGEF10O15013 1369 aa18.1■□□□□ 0.49
ARHGEF1-202ENST00000347545 TUBGCP6Q96RT7 1819 aa18.1■□□□□ 0.49
ARHGEF1-202ENST00000347545 DIP2AQ14689 1571 aa18.1■□□□□ 0.49
ARHGEF1-202ENST00000347545 SOX12O15370 315 aa18.09■□□□□ 0.49
ARHGEF1-202ENST00000347545 TTC22Q5TAA0 569 aa18.09■□□□□ 0.49
ARHGEF1-202ENST00000347545 MIS18AQ9NYP9 233 aa18.09■□□□□ 0.49
ARHGEF1-202ENST00000347545 FAM208AQ9UK61 1670 aaKnown RBP18.09■□□□□ 0.49
ARHGEF1-202ENST00000347545 AK9Q5TCS8 1911 aa18.09■□□□□ 0.49
ARHGEF1-202ENST00000347545 TNPO1Q92973 898 aaKnown RBP18.09■□□□□ 0.49
ARHGEF1-202ENST00000347545 MEIS3Q99687 375 aa18.09■□□□□ 0.49
ARHGEF1-202ENST00000347545 XRCC6P12956 609 aaKnown RBP eCLIP18.09■□□□□ 0.49
ARHGEF1-202ENST00000347545 SLC26A8Q96RN1 970 aa18.09■□□□□ 0.49
ARHGEF1-202ENST00000347545 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.48
ARHGEF1-202ENST00000347545 L1TD1Q5T7N2 865 aaKnown RBP18.08■□□□□ 0.48
ARHGEF1-202ENST00000347545 MTHFSDQ2M296 383 aaKnown RBP18.07■□□□□ 0.48
ARHGEF1-202ENST00000347545 PTPRCP08575 1304 aa18.07■□□□□ 0.48
ARHGEF1-202ENST00000347545 RAB3GAP1Q15042 981 aa18.07■□□□□ 0.48
ARHGEF1-202ENST00000347545 XRN1Q8IZH2 1706 aaKnown RBP18.07■□□□□ 0.48
ARHGEF1-202ENST00000347545 KDRP35968 1356 aa18.07■□□□□ 0.48
ARHGEF1-202ENST00000347545 SMARCA5O60264 1052 aaPredicted RBP18.07■□□□□ 0.48
ARHGEF1-202ENST00000347545 K7ELQ4 463 aaPredicted RBP18.06■□□□□ 0.48
ARHGEF1-202ENST00000347545 G2E3Q7L622 706 aa18.06■□□□□ 0.48
ARHGEF1-202ENST00000347545 FOXD4L1Q9NU39 408 aa18.06■□□□□ 0.48
ARHGEF1-202ENST00000347545 SLIT1O75093 1534 aa18.06■□□□□ 0.48
ARHGEF1-202ENST00000347545 FAM43AQ8N2R8 423 aa18.06■□□□□ 0.48
ARHGEF1-202ENST00000347545 GAS2L2Q8NHY3 880 aa18.06■□□□□ 0.48
ARHGEF1-202ENST00000347545 ARXQ96QS3 562 aa18.06■□□□□ 0.48
ARHGEF1-202ENST00000347545 CIZ1Q9ULV3 898 aaPredicted RBP18.06■□□□□ 0.48
ARHGEF1-202ENST00000347545 ARHGAP23Q9P227 1491 aa18.05■□□□□ 0.48
ARHGEF1-202ENST00000347545 CEBPAP49715 358 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF1-202ENST00000347545 RPAP2Q8IXW5 612 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF1-202ENST00000347545 PANK2Q9BZ23 570 aa18.05■□□□□ 0.48
ARHGEF1-202ENST00000347545 N4BP2Q86UW6 1770 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF1-202ENST00000347545 NWD1Q149M9 1564 aa18.05■□□□□ 0.48
ARHGEF1-202ENST00000347545 SBNO1A3KN83 1393 aa18.05■□□□□ 0.48
ARHGEF1-202ENST00000347545 DDX11L8A8MPP1 907 aa18.04■□□□□ 0.48
ARHGEF1-202ENST00000347545 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
ARHGEF1-202ENST00000347545 GOLGA6L3A6NEY3 463 aa18.04■□□□□ 0.48
ARHGEF1-202ENST00000347545 FLT4P35916 1363 aa18.04■□□□□ 0.48
ARHGEF1-202ENST00000347545 TTC21AQ8NDW8 1320 aa18.03■□□□□ 0.48
ARHGEF1-202ENST00000347545 USP54Q70EL1 1684 aa18.03■□□□□ 0.48
ARHGEF1-202ENST00000347545 AMOTL2Q9Y2J4 779 aa18.03■□□□□ 0.48
ARHGEF1-202ENST00000347545 USP26Q9BXU7 913 aa18.02■□□□□ 0.48
ARHGEF1-202ENST00000347545 IGSF1Q8N6C5 1336 aa18.02■□□□□ 0.48
ARHGEF1-202ENST00000347545 F6X3S4 739 aa18.02■□□□□ 0.48
ARHGEF1-202ENST00000347545 SDSP20132 328 aa18.02■□□□□ 0.48
ARHGEF1-202ENST00000347545 HAP1P54257 671 aaPredicted RBP18.02■□□□□ 0.48
ARHGEF1-202ENST00000347545 EYA1Q99502 592 aa18.02■□□□□ 0.48
ARHGEF1-202ENST00000347545 APBB1O00213 710 aa18.01■□□□□ 0.47
ARHGEF1-202ENST00000347545 RRAGDQ9NQL2 400 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF1-202ENST00000347545 TSPYL4Q9UJ04 414 aa18■□□□□ 0.47
ARHGEF1-202ENST00000347545 SSFA2P28290 1259 aa18■□□□□ 0.47
ARHGEF1-202ENST00000347545 CACNA1FO60840 1977 aa17.99■□□□□ 0.47
ARHGEF1-202ENST00000347545 FER1L4A9Z1Z3 1794 aa17.98■□□□□ 0.47
ARHGEF1-202ENST00000347545 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
ARHGEF1-202ENST00000347545 RABEP1Q15276 862 aa17.97■□□□□ 0.47
ARHGEF1-202ENST00000347545 TBX22Q9Y458 520 aa17.97■□□□□ 0.47
ARHGEF1-202ENST00000347545 RTF1Q92541 710 aaKnown RBP17.96■□□□□ 0.47
ARHGEF1-202ENST00000347545 GBP4Q96PP9 640 aa17.96■□□□□ 0.47
ARHGEF1-202ENST00000347545 GAS2L3Q86XJ1 694 aa17.96■□□□□ 0.47
ARHGEF1-202ENST00000347545 LTN1O94822 1766 aa17.96■□□□□ 0.47
ARHGEF1-202ENST00000347545 HSP90AA1P07900 732 aaKnown RBP17.95■□□□□ 0.46
ARHGEF1-202ENST00000347545 NGDNQ8NEJ9 315 aaKnown RBP17.95■□□□□ 0.46
ARHGEF1-202ENST00000347545 SALL3Q9BXA9 1300 aa17.95■□□□□ 0.46
ARHGEF1-202ENST00000347545 AMPHP49418 695 aa17.95■□□□□ 0.46
ARHGEF1-202ENST00000347545 CLEC17AQ6ZS10 378 aa17.95■□□□□ 0.46
ARHGEF1-202ENST00000347545 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
ARHGEF1-202ENST00000347545 CCT4P50991 539 aaKnown RBP17.95■□□□□ 0.46
ARHGEF1-202ENST00000347545 MRE11P49959 708 aa17.94■□□□□ 0.46
ARHGEF1-202ENST00000347545 OSBPL3Q9H4L5 887 aa17.94■□□□□ 0.46
ARHGEF1-202ENST00000347545 GRPEL1Q9HAV7 217 aa17.94■□□□□ 0.46
ARHGEF1-202ENST00000347545 PDE1AP54750 535 aa17.93■□□□□ 0.46
ARHGEF1-202ENST00000347545 HOXC9P31274 260 aa17.92■□□□□ 0.46
ARHGEF1-202ENST00000347545 NUTM2GQ5VZR2 741 aa17.92■□□□□ 0.46
ARHGEF1-202ENST00000347545 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
ARHGEF1-202ENST00000347545 EXOC6BQ9Y2D4 811 aa17.92■□□□□ 0.46
ARHGEF1-202ENST00000347545 ANKARQ7Z5J8 1434 aa17.92■□□□□ 0.46
ARHGEF1-202ENST00000347545 CYP2E1P05181 493 aaPredicted RBP17.92■□□□□ 0.46
ARHGEF1-202ENST00000347545 IL17REQ8NFR9 667 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms