RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 COL23A1Q86Y22 540 aaPredicted RBP20.67■□□□□ 0.9
CSHL1-203ENST00000346606 CARD11Q9BXL7 1154 aa20.67■□□□□ 0.9
CSHL1-203ENST00000346606 MAP3K19Q56UN5 1328 aa20.67■□□□□ 0.9
CSHL1-203ENST00000346606 ZCRB1Q8TBF4 217 aaKnown RBP20.66■□□□□ 0.9
CSHL1-203ENST00000346606 TERF2IPQ9NYB0 399 aa20.66■□□□□ 0.9
CSHL1-203ENST00000346606 SHANK3Q9BYB0 1731 aa20.66■□□□□ 0.9
CSHL1-203ENST00000346606 HOXC9P31274 260 aa20.65■□□□□ 0.9
CSHL1-203ENST00000346606 TRIM26Q12899 539 aaPredicted RBP20.65■□□□□ 0.9
CSHL1-203ENST00000346606 CCNL1Q9UK58 526 aaPredicted RBP20.65■□□□□ 0.9
CSHL1-203ENST00000346606 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.9
CSHL1-203ENST00000346606 IFFO2Q5TF58 517 aa20.64■□□□□ 0.89
CSHL1-203ENST00000346606 MEGF6O75095 1541 aa20.63■□□□□ 0.89
CSHL1-203ENST00000346606 MSL1Q68DK7 614 aa20.63■□□□□ 0.89
CSHL1-203ENST00000346606 GRIN3BO60391 1043 aa20.62■□□□□ 0.89
CSHL1-203ENST00000346606 PUS7Q96PZ0 661 aaKnown RBP20.62■□□□□ 0.89
CSHL1-203ENST00000346606 MSH5O43196 834 aa20.61■□□□□ 0.89
CSHL1-203ENST00000346606 NBPF6Q5VWK0 638 aa20.61■□□□□ 0.89
CSHL1-203ENST00000346606 NBPF4Q96M43 638 aa20.61■□□□□ 0.89
CSHL1-203ENST00000346606 TUBGCP6Q96RT7 1819 aa20.61■□□□□ 0.89
CSHL1-203ENST00000346606 KAT6BQ8WYB5 2073 aa20.61■□□□□ 0.89
CSHL1-203ENST00000346606 FAM208AQ9UK61 1670 aaKnown RBP20.61■□□□□ 0.89
CSHL1-203ENST00000346606 AMPHP49418 695 aa20.6■□□□□ 0.89
CSHL1-203ENST00000346606 COG3Q96JB2 828 aa20.6■□□□□ 0.89
CSHL1-203ENST00000346606 USP47Q96K76 1375 aa20.59■□□□□ 0.89
CSHL1-203ENST00000346606 LY75O60449 1722 aa20.58■□□□□ 0.89
CSHL1-203ENST00000346606 USHBP1Q8N6Y0 703 aa20.58■□□□□ 0.89
CSHL1-203ENST00000346606 TESK2Q96S53 571 aa20.58■□□□□ 0.89
CSHL1-203ENST00000346606 ATP10DQ9P241 1426 aa20.58■□□□□ 0.88
CSHL1-203ENST00000346606 DOT1LQ8TEK3 1739 aa20.58■□□□□ 0.88
CSHL1-203ENST00000346606 RRS1Q15050 365 aaKnown RBP20.57■□□□□ 0.88
CSHL1-203ENST00000346606 AMIGO3Q86WK7 504 aa20.55■□□□□ 0.88
CSHL1-203ENST00000346606 CD2APQ9Y5K6 639 aa20.55■□□□□ 0.88
CSHL1-203ENST00000346606 ST20-MTHFSA0A0A6YYL1 179 aa20.52■□□□□ 0.88
CSHL1-203ENST00000346606 SMIM5Q71RC9 77 aa20.52■□□□□ 0.88
CSHL1-203ENST00000346606 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.87
CSHL1-203ENST00000346606 RTL1A6NKG5 1358 aa20.51■□□□□ 0.87
CSHL1-203ENST00000346606 ADCY9O60503 1353 aa20.51■□□□□ 0.87
CSHL1-203ENST00000346606 FYB1O15117 783 aa20.51■□□□□ 0.87
CSHL1-203ENST00000346606 PALLDQ8WX93 1383 aa20.5■□□□□ 0.87
CSHL1-203ENST00000346606 RGPD2P0DJD1 1756 aa20.5■□□□□ 0.87
CSHL1-203ENST00000346606 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
CSHL1-203ENST00000346606 RAPGEF4Q8WZA2 1011 aa20.5■□□□□ 0.87
CSHL1-203ENST00000346606 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
CSHL1-203ENST00000346606 GPBP1L1Q9HC44 474 aaPredicted RBP20.5■□□□□ 0.87
CSHL1-203ENST00000346606 CYP27B1O15528 508 aa20.49■□□□□ 0.87
CSHL1-203ENST00000346606 MPRIPQ6WCQ1 1025 aa20.49■□□□□ 0.87
CSHL1-203ENST00000346606 TATP17735 454 aaPredicted RBP20.48■□□□□ 0.87
CSHL1-203ENST00000346606 FLAD1Q8NFF5 587 aa20.48■□□□□ 0.87
CSHL1-203ENST00000346606 ZNF526Q8TF50 670 aaPredicted RBP20.48■□□□□ 0.87
CSHL1-203ENST00000346606 WWC3Q9ULE0 1092 aa20.48■□□□□ 0.87
CSHL1-203ENST00000346606 HSPA6P17066 643 aa20.46■□□□□ 0.87
CSHL1-203ENST00000346606 PCDH11XQ9BZA7 1347 aa20.46■□□□□ 0.87
CSHL1-203ENST00000346606 PCDH11YQ9BZA8 1340 aa20.46■□□□□ 0.87
CSHL1-203ENST00000346606 PIGBQ92521 554 aa20.44■□□□□ 0.86
CSHL1-203ENST00000346606 IGSF1Q8N6C5 1336 aa20.44■□□□□ 0.86
CSHL1-203ENST00000346606 INSRP06213 1382 aa20.44■□□□□ 0.86
CSHL1-203ENST00000346606 C5P01031 1676 aa20.43■□□□□ 0.86
CSHL1-203ENST00000346606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.43■□□□□ 0.86
CSHL1-203ENST00000346606 PHF14O94880 888 aa20.43■□□□□ 0.86
CSHL1-203ENST00000346606 AK7Q96M32 723 aa20.43■□□□□ 0.86
CSHL1-203ENST00000346606 TONSLQ96HA7 1378 aa20.42■□□□□ 0.86
CSHL1-203ENST00000346606 SMG6Q86US8 1419 aaKnown RBP20.42■□□□□ 0.86
CSHL1-203ENST00000346606 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
CSHL1-203ENST00000346606 SMARCC1Q92922 1105 aaPredicted RBP20.41■□□□□ 0.86
CSHL1-203ENST00000346606 KIF3CO14782 793 aa20.4■□□□□ 0.86
CSHL1-203ENST00000346606 HMGB2P26583 209 aaKnown RBP20.4■□□□□ 0.86
CSHL1-203ENST00000346606 TOGARAM1Q9Y4F4 1720 aa20.4■□□□□ 0.86
CSHL1-203ENST00000346606 C4BP0C0L5 1744 aa20.39■□□□□ 0.86
CSHL1-203ENST00000346606 FLT4P35916 1363 aa20.39■□□□□ 0.85
CSHL1-203ENST00000346606 NKX1-1Q15270 411 aaPredicted RBP20.39■□□□□ 0.85
CSHL1-203ENST00000346606 EMILIN1Q9Y6C2 1016 aa20.38■□□□□ 0.85
CSHL1-203ENST00000346606 LOC102724428A0A0B4J2F2 783 aa20.37■□□□□ 0.85
CSHL1-203ENST00000346606 SLC24A1O60721 1099 aa20.37■□□□□ 0.85
CSHL1-203ENST00000346606 SSFA2P28290 1259 aa20.37■□□□□ 0.85
CSHL1-203ENST00000346606 SIK1P57059 783 aa20.37■□□□□ 0.85
CSHL1-203ENST00000346606 ITPK1Q13572 414 aa20.37■□□□□ 0.85
CSHL1-203ENST00000346606 TAF1LQ8IZX4 1826 aa20.37■□□□□ 0.85
CSHL1-203ENST00000346606 KIF24Q5T7B8 1368 aa20.36■□□□□ 0.85
CSHL1-203ENST00000346606 CARD14Q9BXL6 1004 aa20.35■□□□□ 0.85
CSHL1-203ENST00000346606 ASAP1Q9ULH1 1129 aa20.35■□□□□ 0.85
CSHL1-203ENST00000346606 NCAPD2Q15021 1401 aa20.35■□□□□ 0.85
CSHL1-203ENST00000346606 PCGF6Q9BYE7 350 aa20.34■□□□□ 0.85
CSHL1-203ENST00000346606 GNPATO15228 680 aa20.33■□□□□ 0.85
CSHL1-203ENST00000346606 TMF1P82094 1093 aa20.33■□□□□ 0.85
CSHL1-203ENST00000346606 NSD3Q9BZ95 1437 aa20.33■□□□□ 0.84
CSHL1-203ENST00000346606 MMP10P09238 476 aa20.32■□□□□ 0.84
CSHL1-203ENST00000346606 UBR3Q6ZT12 1888 aa20.31■□□□□ 0.84
CSHL1-203ENST00000346606 EYA1Q99502 592 aa20.31■□□□□ 0.84
CSHL1-203ENST00000346606 SPG7Q9UQ90 795 aa20.31■□□□□ 0.84
CSHL1-203ENST00000346606 MAP2P11137 1827 aaKnown RBP20.3■□□□□ 0.84
CSHL1-203ENST00000346606 PPM1GO15355 546 aaPredicted RBP20.3■□□□□ 0.84
CSHL1-203ENST00000346606 ATP6V1AP38606 617 aa20.3■□□□□ 0.84
CSHL1-203ENST00000346606 ATG3Q9NT62 314 aa20.3■□□□□ 0.84
CSHL1-203ENST00000346606 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
CSHL1-203ENST00000346606 PXDNLA1KZ92 1463 aa20.3■□□□□ 0.84
CSHL1-203ENST00000346606 DNAJC5GQ8N7S2 189 aa20.29■□□□□ 0.84
CSHL1-203ENST00000346606 PKD1L3Q7Z443 1732 aa20.29■□□□□ 0.84
CSHL1-203ENST00000346606 CICQ96RK0 1608 aaPredicted RBP20.28■□□□□ 0.84
CSHL1-203ENST00000346606 ITGB4P16144 1822 aa20.28■□□□□ 0.84
CSHL1-203ENST00000346606 PHKG2P15735 406 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms