RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 STRCP1A6NGW2 1772 aa17.95■□□□□ 0.46
CDK5RAP1-202ENST00000346416 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
CDK5RAP1-202ENST00000346416 GCP02774 474 aa17.95■□□□□ 0.46
CDK5RAP1-202ENST00000346416 ZBTB40Q9NUA8 1239 aa17.95■□□□□ 0.46
CDK5RAP1-202ENST00000346416 KIAA0232Q92628 1395 aa17.95■□□□□ 0.46
CDK5RAP1-202ENST00000346416 ATF3P18847 181 aa17.95■□□□□ 0.46
CDK5RAP1-202ENST00000346416 USHBP1Q8N6Y0 703 aa17.95■□□□□ 0.46
CDK5RAP1-202ENST00000346416 KIF1AQ12756 1690 aa17.94■□□□□ 0.46
CDK5RAP1-202ENST00000346416 HTATSF1O43719 755 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP1-202ENST00000346416 HAP1P54257 671 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP1-202ENST00000346416 MIS18AQ9NYP9 233 aa17.94■□□□□ 0.46
CDK5RAP1-202ENST00000346416 TRPM3Q9HCF6 1732 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP1-202ENST00000346416 PLEKHG5O94827 1062 aa17.93■□□□□ 0.46
CDK5RAP1-202ENST00000346416 FAM161AQ3B820 660 aa17.93■□□□□ 0.46
CDK5RAP1-202ENST00000346416 PHRF1Q9P1Y6 1649 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP1-202ENST00000346416 SLIT3O75094 1523 aa17.93■□□□□ 0.46
CDK5RAP1-202ENST00000346416 GNAT3A8MTJ3 354 aa17.93■□□□□ 0.46
CDK5RAP1-202ENST00000346416 NBPF6Q5VWK0 638 aa17.92■□□□□ 0.46
CDK5RAP1-202ENST00000346416 ARHGEF25Q86VW2 580 aa17.92■□□□□ 0.46
CDK5RAP1-202ENST00000346416 NBPF4Q96M43 638 aa17.92■□□□□ 0.46
CDK5RAP1-202ENST00000346416 TSPYL4Q9UJ04 414 aa17.92■□□□□ 0.46
CDK5RAP1-202ENST00000346416 MST1RQ04912 1400 aa17.92■□□□□ 0.46
CDK5RAP1-202ENST00000346416 HDAC1Q13547 482 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP1-202ENST00000346416 C8orf34Q49A92 452 aa17.92■□□□□ 0.46
CDK5RAP1-202ENST00000346416 ABCC4O15439 1325 aa17.92■□□□□ 0.46
CDK5RAP1-202ENST00000346416 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP1-202ENST00000346416 USP19O94966 1318 aa17.91■□□□□ 0.46
CDK5RAP1-202ENST00000346416 DCCP43146 1447 aa17.91■□□□□ 0.46
CDK5RAP1-202ENST00000346416 NCOA3Q9Y6Q9 1424 aa17.91■□□□□ 0.46
CDK5RAP1-202ENST00000346416 API5Q9BZZ5 524 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP1-202ENST00000346416 PDZRN3Q9UPQ7 1066 aa17.9■□□□□ 0.46
CDK5RAP1-202ENST00000346416 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
CDK5RAP1-202ENST00000346416 MSH6P52701 1360 aa17.9■□□□□ 0.46
CDK5RAP1-202ENST00000346416 ZBTB7BO15156 539 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP1-202ENST00000346416 IPO9Q96P70 1041 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP1-202ENST00000346416 LRRC37A3O60309 1634 aa17.88■□□□□ 0.45
CDK5RAP1-202ENST00000346416 CADPS2Q86UW7 1296 aa17.88■□□□□ 0.45
CDK5RAP1-202ENST00000346416 IL17REQ8NFR9 667 aa17.88■□□□□ 0.45
CDK5RAP1-202ENST00000346416 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP1-202ENST00000346416 CHMP4BQ9H444 224 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP1-202ENST00000346416 RGPD2P0DJD1 1756 aa17.87■□□□□ 0.45
CDK5RAP1-202ENST00000346416 ALS2Q96Q42 1657 aa17.86■□□□□ 0.45
CDK5RAP1-202ENST00000346416 KDM4FA0A1W2PPD8 638 aa17.86■□□□□ 0.45
CDK5RAP1-202ENST00000346416 DDX17Q92841 729 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP1-202ENST00000346416 SMC5Q8IY18 1101 aa17.84■□□□□ 0.45
CDK5RAP1-202ENST00000346416 ANKRD24Q8TF21 1146 aa17.84■□□□□ 0.45
CDK5RAP1-202ENST00000346416 AXIN2Q9Y2T1 843 aa17.84■□□□□ 0.45
CDK5RAP1-202ENST00000346416 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
CDK5RAP1-202ENST00000346416 TAF7Q15545 349 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP1-202ENST00000346416 LMTK3Q96Q04 1460 aa17.84■□□□□ 0.45
CDK5RAP1-202ENST00000346416 ERICH6Q7L0X2 663 aa17.83■□□□□ 0.45
CDK5RAP1-202ENST00000346416 PTPRCP08575 1304 aa17.83■□□□□ 0.44
CDK5RAP1-202ENST00000346416 RGS12O14924 1447 aa17.83■□□□□ 0.44
CDK5RAP1-202ENST00000346416 ZC3H6P61129 1189 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP1-202ENST00000346416 C1orf115Q9H7X2 142 aa17.83■□□□□ 0.44
CDK5RAP1-202ENST00000346416 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.44
CDK5RAP1-202ENST00000346416 NOP58Q9Y2X3 529 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP1-202ENST00000346416 MED1Q15648 1581 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP1-202ENST00000346416 NPHP3Q7Z494 1330 aa17.82■□□□□ 0.44
CDK5RAP1-202ENST00000346416 INTS3Q68E01 1043 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP1-202ENST00000346416 NCAPD2Q15021 1401 aa17.82■□□□□ 0.44
CDK5RAP1-202ENST00000346416 CEMIPQ8WUJ3 1361 aa17.81■□□□□ 0.44
CDK5RAP1-202ENST00000346416 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
CDK5RAP1-202ENST00000346416 PLEKHO1Q53GL0 409 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP1-202ENST00000346416 VIRMAQ69YN4 1812 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP1-202ENST00000346416 XIRP1Q702N8 1843 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP1-202ENST00000346416 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP1-202ENST00000346416 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP1-202ENST00000346416 RGPD5Q99666 1765 aa17.79■□□□□ 0.44
CDK5RAP1-202ENST00000346416 AMOTQ4VCS5 1084 aa17.79■□□□□ 0.44
CDK5RAP1-202ENST00000346416 LGR6Q9HBX8 967 aa17.79■□□□□ 0.44
CDK5RAP1-202ENST00000346416 ERBB3P21860 1342 aa17.79■□□□□ 0.44
CDK5RAP1-202ENST00000346416 AKAP4Q5JQC9 854 aa17.78■□□□□ 0.44
CDK5RAP1-202ENST00000346416 G2E3Q7L622 706 aa17.78■□□□□ 0.44
CDK5RAP1-202ENST00000346416 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
CDK5RAP1-202ENST00000346416 SIRT2Q8IXJ6 389 aa17.78■□□□□ 0.44
CDK5RAP1-202ENST00000346416 TNS3Q68CZ2 1445 aa17.77■□□□□ 0.44
CDK5RAP1-202ENST00000346416 NUCB1Q02818 461 aa17.77■□□□□ 0.44
CDK5RAP1-202ENST00000346416 CCDC30Q5VVM6 783 aa17.77■□□□□ 0.44
CDK5RAP1-202ENST00000346416 SOS1Q07889 1333 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP1-202ENST00000346416 CAMTA1Q9Y6Y1 1673 aa17.77■□□□□ 0.44
CDK5RAP1-202ENST00000346416 PXDNQ92626 1479 aa17.77■□□□□ 0.44
CDK5RAP1-202ENST00000346416 LMO7Q8WWI1 1683 aa17.77■□□□□ 0.43
CDK5RAP1-202ENST00000346416 CABLES1Q8TDN4 633 aa17.77■□□□□ 0.43
CDK5RAP1-202ENST00000346416 MPRIPQ6WCQ1 1025 aa17.75■□□□□ 0.43
CDK5RAP1-202ENST00000346416 GCC1Q96CN9 775 aa17.75■□□□□ 0.43
CDK5RAP1-202ENST00000346416 SPATA31A3Q5VYP0 1347 aa17.75■□□□□ 0.43
CDK5RAP1-202ENST00000346416 C1orf141Q5JVX7 400 aa17.75■□□□□ 0.43
CDK5RAP1-202ENST00000346416 BRINP3Q76B58 766 aa17.75■□□□□ 0.43
CDK5RAP1-202ENST00000346416 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
CDK5RAP1-202ENST00000346416 ZNF335Q9H4Z2 1342 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP1-202ENST00000346416 TEFQ10587 303 aa17.74■□□□□ 0.43
CDK5RAP1-202ENST00000346416 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
CDK5RAP1-202ENST00000346416 FAM208AQ9UK61 1670 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP1-202ENST00000346416 F6X3S4 739 aa17.74■□□□□ 0.43
CDK5RAP1-202ENST00000346416 SEC24BO95487 1268 aa17.74■□□□□ 0.43
CDK5RAP1-202ENST00000346416 LNPKQ9C0E8 428 aa17.74■□□□□ 0.43
CDK5RAP1-202ENST00000346416 FLIIQ13045 1269 aa17.73■□□□□ 0.43
CDK5RAP1-202ENST00000346416 SLC4A10Q6U841 1118 aa17.73■□□□□ 0.43
CDK5RAP1-202ENST00000346416 CACNA1FO60840 1977 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms