RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 CFAP44Q96MT7 982 aa18.99■□□□□ 0.63
CTTN-202ENST00000346329 GNAT3A8MTJ3 354 aa18.99■□□□□ 0.63
CTTN-202ENST00000346329 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
CTTN-202ENST00000346329 TSHZ3Q63HK5 1081 aa18.98■□□□□ 0.63
CTTN-202ENST00000346329 CADPS2Q86UW7 1296 aa18.98■□□□□ 0.63
CTTN-202ENST00000346329 MVPQ14764 893 aaKnown RBP18.98■□□□□ 0.63
CTTN-202ENST00000346329 OVOS2A0A0J9YW53 1432 aa18.97■□□□□ 0.63
CTTN-202ENST00000346329 OVOS2Q6IE36 1432 aa18.97■□□□□ 0.63
CTTN-202ENST00000346329 SMARCA5O60264 1052 aaPredicted RBP18.97■□□□□ 0.63
CTTN-202ENST00000346329 C1orf141Q5JVX7 400 aa18.97■□□□□ 0.63
CTTN-202ENST00000346329 RAPGEF4Q8WZA2 1011 aa18.97■□□□□ 0.63
CTTN-202ENST00000346329 IP6K1Q92551 441 aa18.97■□□□□ 0.63
CTTN-202ENST00000346329 PDZRN3Q9UPQ7 1066 aa18.97■□□□□ 0.63
CTTN-202ENST00000346329 MSH6P52701 1360 aa18.97■□□□□ 0.63
CTTN-202ENST00000346329 FAM182BQ5T319 152 aa18.96■□□□□ 0.63
CTTN-202ENST00000346329 KIAA0232Q92628 1395 aa18.96■□□□□ 0.63
CTTN-202ENST00000346329 SBNO1A3KN83 1393 aa18.96■□□□□ 0.63
CTTN-202ENST00000346329 NFATC2IPQ8NCF5 419 aa18.96■□□□□ 0.63
CTTN-202ENST00000346329 ADGRL3Q9HAR2 1447 aa18.95■□□□□ 0.62
CTTN-202ENST00000346329 ANKRD45Q5TZF3 282 aa18.95■□□□□ 0.62
CTTN-202ENST00000346329 SEC24BO95487 1268 aa18.94■□□□□ 0.62
CTTN-202ENST00000346329 ARHGEF25Q86VW2 580 aa18.94■□□□□ 0.62
CTTN-202ENST00000346329 USP32Q8NFA0 1604 aa18.94■□□□□ 0.62
CTTN-202ENST00000346329 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
CTTN-202ENST00000346329 BTBD11A6QL63 1104 aa18.94■□□□□ 0.62
CTTN-202ENST00000346329 CCDC27Q2M243 656 aa18.93■□□□□ 0.62
CTTN-202ENST00000346329 MRPL50Q8N5N7 158 aaKnown RBP18.93■□□□□ 0.62
CTTN-202ENST00000346329 MEIS3Q99687 375 aa18.93■□□□□ 0.62
CTTN-202ENST00000346329 HDGFL1Q5TGJ6 251 aa18.93■□□□□ 0.62
CTTN-202ENST00000346329 IFT57Q9NWB7 429 aa18.93■□□□□ 0.62
CTTN-202ENST00000346329 IQSEC2Q5JU85 1478 aa18.93■□□□□ 0.62
CTTN-202ENST00000346329 LARP1Q6PKG0 1096 aaKnown RBP18.92■□□□□ 0.62
CTTN-202ENST00000346329 C16orf71Q8IYS4 520 aaPredicted RBP18.92■□□□□ 0.62
CTTN-202ENST00000346329 C1orf167Q5SNV9 1468 aa18.92■□□□□ 0.62
CTTN-202ENST00000346329 LMOD3Q0VAK6 560 aa18.92■□□□□ 0.62
CTTN-202ENST00000346329 PROSER3Q2NL68 480 aa18.92■□□□□ 0.62
CTTN-202ENST00000346329 GAS2L2Q8NHY3 880 aa18.91■□□□□ 0.62
CTTN-202ENST00000346329 KCNQ4P56696 695 aa18.9■□□□□ 0.62
CTTN-202ENST00000346329 KCNH5Q8NCM2 988 aa18.9■□□□□ 0.62
CTTN-202ENST00000346329 STK31Q9BXU1 1019 aa18.9■□□□□ 0.62
CTTN-202ENST00000346329 CHPF2Q9P2E5 772 aa18.9■□□□□ 0.62
CTTN-202ENST00000346329 ADAMTSL3P82987 1691 aa18.9■□□□□ 0.62
CTTN-202ENST00000346329 KIF20BQ96Q89 1820 aa18.89■□□□□ 0.62
CTTN-202ENST00000346329 AATKQ6ZMQ8 1374 aa18.89■□□□□ 0.62
CTTN-202ENST00000346329 ERICH6BQ5W0A0 696 aa18.89■□□□□ 0.62
CTTN-202ENST00000346329 IGSF1Q8N6C5 1336 aa18.89■□□□□ 0.61
CTTN-202ENST00000346329 BTG4Q9NY30 223 aa18.89■□□□□ 0.61
CTTN-202ENST00000346329 CENPQQ7L2Z9 268 aaPredicted RBP18.89■□□□□ 0.61
CTTN-202ENST00000346329 IPO8O15397 1037 aaKnown RBP18.88■□□□□ 0.61
CTTN-202ENST00000346329 PDE3AQ14432 1141 aa18.88■□□□□ 0.61
CTTN-202ENST00000346329 NPHP3Q7Z494 1330 aa18.88■□□□□ 0.61
CTTN-202ENST00000346329 OTUD7AQ8TE49 926 aaPredicted RBP18.88■□□□□ 0.61
CTTN-202ENST00000346329 CHL1O00533 1208 aa18.87■□□□□ 0.61
CTTN-202ENST00000346329 ITSN1Q15811 1721 aa18.87■□□□□ 0.61
CTTN-202ENST00000346329 NALCNQ8IZF0 1738 aa18.87■□□□□ 0.61
CTTN-202ENST00000346329 PEAK1Q9H792 1746 aa18.87■□□□□ 0.61
CTTN-202ENST00000346329 CCDC85AQ96PX6 553 aaPredicted RBP18.87■□□□□ 0.61
CTTN-202ENST00000346329 EXOC6BQ9Y2D4 811 aa18.87■□□□□ 0.61
CTTN-202ENST00000346329 CDK12Q9NYV4 1490 aaPredicted RBP18.87■□□□□ 0.61
CTTN-202ENST00000346329 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
CTTN-202ENST00000346329 SMIM5Q71RC9 77 aa18.86■□□□□ 0.61
CTTN-202ENST00000346329 TAF7Q15545 349 aaPredicted RBP18.86■□□□□ 0.61
CTTN-202ENST00000346329 ACSBG1Q96GR2 724 aa18.86■□□□□ 0.61
CTTN-202ENST00000346329 ANP32AP39687 249 aaKnown RBP18.85■□□□□ 0.61
CTTN-202ENST00000346329 MFAP1P55081 439 aaKnown RBP18.85■□□□□ 0.61
CTTN-202ENST00000346329 CALD1Q05682 793 aaKnown RBP18.85■□□□□ 0.61
CTTN-202ENST00000346329 PLEKHO1Q53GL0 409 aaPredicted RBP18.85■□□□□ 0.61
CTTN-202ENST00000346329 FAM177BA6PVY3 158 aa18.85■□□□□ 0.61
CTTN-202ENST00000346329 ZNF853P0CG23 659 aa18.84■□□□□ 0.61
CTTN-202ENST00000346329 USP31Q70CQ4 1352 aa18.84■□□□□ 0.61
CTTN-202ENST00000346329 MAP4K4O95819 1239 aaPredicted RBP18.83■□□□□ 0.61
CTTN-202ENST00000346329 TATP17735 454 aaPredicted RBP18.83■□□□□ 0.61
CTTN-202ENST00000346329 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.61
CTTN-202ENST00000346329 DDX19BQ9UMR2 479 aa18.83■□□□□ 0.61
CTTN-202ENST00000346329 ERBB3P21860 1342 aa18.83■□□□□ 0.6
CTTN-202ENST00000346329 KDM2BQ8NHM5 1336 aa18.83■□□□□ 0.6
CTTN-202ENST00000346329 CWF19L2Q2TBE0 894 aaKnown RBP18.83■□□□□ 0.6
CTTN-202ENST00000346329 LMTK3Q96Q04 1460 aa18.83■□□□□ 0.6
CTTN-202ENST00000346329 USP19O94966 1318 aa18.82■□□□□ 0.6
CTTN-202ENST00000346329 KIF16BQ96L93 1317 aa18.82■□□□□ 0.6
CTTN-202ENST00000346329 PIK3C2AO00443 1686 aa18.82■□□□□ 0.6
CTTN-202ENST00000346329 PI4KAP2A4QPH2 592 aa18.82■□□□□ 0.6
CTTN-202ENST00000346329 FLIIQ13045 1269 aa18.82■□□□□ 0.6
CTTN-202ENST00000346329 PI4KAP1Q8N8J0 262 aa18.82■□□□□ 0.6
CTTN-202ENST00000346329 IL1RAPL2Q9NP60 686 aa18.82■□□□□ 0.6
CTTN-202ENST00000346329 ATP5J2-PTCD1G3V325 749 aa18.82■□□□□ 0.6
CTTN-202ENST00000346329 RBM42Q9BTD8 480 aaKnown RBP18.82■□□□□ 0.6
CTTN-202ENST00000346329 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
CTTN-202ENST00000346329 PIK3R4Q99570 1358 aa18.8■□□□□ 0.6
CTTN-202ENST00000346329 CYP27B1O15528 508 aa18.8■□□□□ 0.6
CTTN-202ENST00000346329 SIRT2Q8IXJ6 389 aa18.8■□□□□ 0.6
CTTN-202ENST00000346329 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
CTTN-202ENST00000346329 MAP3K5Q99683 1374 aa18.79■□□□□ 0.6
CTTN-202ENST00000346329 RNMTO43148 476 aaKnown RBP18.79■□□□□ 0.6
CTTN-202ENST00000346329 BACH2Q9BYV9 841 aa18.79■□□□□ 0.6
CTTN-202ENST00000346329 FOXD4L1Q9NU39 408 aa18.79■□□□□ 0.6
CTTN-202ENST00000346329 MST1RQ04912 1400 aa18.79■□□□□ 0.6
CTTN-202ENST00000346329 ZBTB40Q9NUA8 1239 aa18.78■□□□□ 0.6
CTTN-202ENST00000346329 PXDNQ92626 1479 aa18.78■□□□□ 0.6
CTTN-202ENST00000346329 ZBTB7BO15156 539 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms