RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 PPM1GO15355 546 aaPredicted RBP25.83■■□□□ 1.73
CCDC78-202ENST00000345165 ZCRB1Q8TBF4 217 aaKnown RBP25.83■■□□□ 1.73
CCDC78-202ENST00000345165 EZH2Q15910 746 aaKnown RBP25.82■■□□□ 1.72
CCDC78-202ENST00000345165 TATP17735 454 aaPredicted RBP25.81■■□□□ 1.72
CCDC78-202ENST00000345165 BTAF1O14981 1849 aa25.8■■□□□ 1.72
CCDC78-202ENST00000345165 TNNT2P45379 298 aaPredicted RBP25.8■■□□□ 1.72
CCDC78-202ENST00000345165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.79■■□□□ 1.72
CCDC78-202ENST00000345165 IGSF1Q8N6C5 1336 aa25.79■■□□□ 1.72
CCDC78-202ENST00000345165 PCDH11XQ9BZA7 1347 aa25.79■■□□□ 1.72
CCDC78-202ENST00000345165 PCDH11YQ9BZA8 1340 aa25.79■■□□□ 1.72
CCDC78-202ENST00000345165 DOT1LQ8TEK3 1739 aa25.79■■□□□ 1.72
CCDC78-202ENST00000345165 EIF4A2Q14240 407 aaKnown RBP25.78■■□□□ 1.72
CCDC78-202ENST00000345165 EYA1Q99502 592 aa25.78■■□□□ 1.72
CCDC78-202ENST00000345165 USHBP1Q8N6Y0 703 aa25.77■■□□□ 1.72
CCDC78-202ENST00000345165 DDX54Q8TDD1 881 aaKnown RBP25.75■■□□□ 1.71
CCDC78-202ENST00000345165 LRP5O75197 1615 aa25.74■■□□□ 1.71
CCDC78-202ENST00000345165 PTF1AQ7RTS3 328 aa25.73■■□□□ 1.71
CCDC78-202ENST00000345165 KCNQ2O43526 872 aa25.72■■□□□ 1.71
CCDC78-202ENST00000345165 KDRP35968 1356 aa25.71■■□□□ 1.71
CCDC78-202ENST00000345165 SPG7Q9UQ90 795 aa25.71■■□□□ 1.71
CCDC78-202ENST00000345165 KAT6BQ8WYB5 2073 aa25.7■■□□□ 1.71
CCDC78-202ENST00000345165 NBPF14Q5TI25 921 aa25.7■■□□□ 1.7
CCDC78-202ENST00000345165 LY75O60449 1722 aa25.68■■□□□ 1.7
CCDC78-202ENST00000345165 NKX1-1Q15270 411 aaPredicted RBP25.68■■□□□ 1.7
CCDC78-202ENST00000345165 ACSBG1Q96GR2 724 aa25.68■■□□□ 1.7
CCDC78-202ENST00000345165 SRCAPQ6ZRS2 3230 aa25.67■■□□□ 1.7
CCDC78-202ENST00000345165 PAPPAQ13219 1627 aa25.67■■□□□ 1.7
CCDC78-202ENST00000345165 CYP27B1O15528 508 aa25.67■■□□□ 1.7
CCDC78-202ENST00000345165 CC2D1BQ5T0F9 858 aaKnown RBP25.67■■□□□ 1.7
CCDC78-202ENST00000345165 PROM2Q8N271 834 aa25.67■■□□□ 1.7
CCDC78-202ENST00000345165 TOGARAM1Q9Y4F4 1720 aa25.66■■□□□ 1.7
CCDC78-202ENST00000345165 IL13P35225 146 aa25.66■■□□□ 1.7
CCDC78-202ENST00000345165 MTHFSP49914 203 aa25.66■■□□□ 1.7
CCDC78-202ENST00000345165 TXNRD1Q16881 649 aa25.66■■□□□ 1.7
CCDC78-202ENST00000345165 ITGB4P16144 1822 aa25.64■■□□□ 1.7
CCDC78-202ENST00000345165 COL3A1P02461 1466 aaPredicted RBP25.64■■□□□ 1.69
CCDC78-202ENST00000345165 PRIM1P49642 420 aaKnown RBP25.63■■□□□ 1.69
CCDC78-202ENST00000345165 R3HDM1Q15032 1099 aaKnown RBP25.63■■□□□ 1.69
CCDC78-202ENST00000345165 SLC27A3Q5K4L6 730 aa25.63■■□□□ 1.69
CCDC78-202ENST00000345165 AMOTQ4VCS5 1084 aa25.62■■□□□ 1.69
CCDC78-202ENST00000345165 HMGB2P26583 209 aaKnown RBP25.61■■□□□ 1.69
CCDC78-202ENST00000345165 ZEB1P37275 1124 aaPredicted RBP25.61■■□□□ 1.69
CCDC78-202ENST00000345165 IFNL2Q8IZJ0 200 aa25.61■■□□□ 1.69
CCDC78-202ENST00000345165 PSDA5PKW4 1024 aaPredicted RBP25.6■■□□□ 1.69
CCDC78-202ENST00000345165 QSER1Q2KHR3 1735 aa25.6■■□□□ 1.69
CCDC78-202ENST00000345165 CASZ1Q86V15 1759 aa25.59■■□□□ 1.69
CCDC78-202ENST00000345165 PHKG2P15735 406 aa25.58■■□□□ 1.69
CCDC78-202ENST00000345165 PLEKHO1Q53GL0 409 aaPredicted RBP25.58■■□□□ 1.69
CCDC78-202ENST00000345165 SYTL4Q96C24 671 aaPredicted RBP25.58■■□□□ 1.69
CCDC78-202ENST00000345165 DIAPH1O60610 1272 aaKnown RBP25.57■■□□□ 1.68
CCDC78-202ENST00000345165 HSP90AB1P08238 724 aaKnown RBP25.57■■□□□ 1.68
CCDC78-202ENST00000345165 ANO8Q9HCE9 1232 aaPredicted RBP25.56■■□□□ 1.68
CCDC78-202ENST00000345165 SULT6B1Q6IMI4 303 aa25.55■■□□□ 1.68
CCDC78-202ENST00000345165 SLC15A2Q16348 729 aa25.53■■□□□ 1.68
CCDC78-202ENST00000345165 AEBP1Q8IUX7 1158 aa25.53■■□□□ 1.68
CCDC78-202ENST00000345165 DCAF5Q96JK2 942 aa25.53■■□□□ 1.68
CCDC78-202ENST00000345165 STK32BQ9NY57 414 aa25.53■■□□□ 1.68
CCDC78-202ENST00000345165 SMARCC1Q92922 1105 aaPredicted RBP25.52■■□□□ 1.68
CCDC78-202ENST00000345165 CFAP53Q96M91 514 aa25.51■■□□□ 1.67
CCDC78-202ENST00000345165 LRRC4BQ9NT99 713 aa25.51■■□□□ 1.67
CCDC78-202ENST00000345165 ZNF831Q5JPB2 1677 aa25.51■■□□□ 1.67
CCDC78-202ENST00000345165 ERVV-2B6SEH9 535 aa25.5■■□□□ 1.67
CCDC78-202ENST00000345165 TAF1LQ8IZX4 1826 aa25.49■■□□□ 1.67
CCDC78-202ENST00000345165 SCN11AQ9UI33 1791 aa25.49■■□□□ 1.67
CCDC78-202ENST00000345165 C5P01031 1676 aa25.49■■□□□ 1.67
CCDC78-202ENST00000345165 PALLDQ8WX93 1383 aa25.49■■□□□ 1.67
CCDC78-202ENST00000345165 PPP2R1AP30153 589 aa25.49■■□□□ 1.67
CCDC78-202ENST00000345165 ZNF530Q6P9A1 599 aaPredicted RBP25.49■■□□□ 1.67
CCDC78-202ENST00000345165 ADAMTS7Q9UKP4 1686 aa25.48■■□□□ 1.67
CCDC78-202ENST00000345165 KDM6AO15550 1401 aaPredicted RBP25.47■■□□□ 1.67
CCDC78-202ENST00000345165 C1orf141Q5JVX7 400 aa25.47■■□□□ 1.67
CCDC78-202ENST00000345165 MPRIPQ6WCQ1 1025 aa25.47■■□□□ 1.67
CCDC78-202ENST00000345165 PIGBQ92521 554 aa25.47■■□□□ 1.67
CCDC78-202ENST00000345165 TMOD3Q9NYL9 352 aa25.47■■□□□ 1.67
CCDC78-202ENST00000345165 AKT1S1Q96B36 256 aa25.46■■□□□ 1.67
CCDC78-202ENST00000345165 CCNL1Q9UK58 526 aaPredicted RBP25.45■■□□□ 1.66
CCDC78-202ENST00000345165 AKAP4Q5JQC9 854 aa25.44■■□□□ 1.66
CCDC78-202ENST00000345165 MRC1P22897 1456 aa25.44■■□□□ 1.66
CCDC78-202ENST00000345165 TUBGCP6Q96RT7 1819 aa25.44■■□□□ 1.66
CCDC78-202ENST00000345165 SPON1Q9HCB6 807 aa25.43■■□□□ 1.66
CCDC78-202ENST00000345165 VIRMAQ69YN4 1812 aaKnown RBP25.42■■□□□ 1.66
CCDC78-202ENST00000345165 CICQ96RK0 1608 aaPredicted RBP25.42■■□□□ 1.66
CCDC78-202ENST00000345165 NUDCQ9Y266 331 aa25.42■■□□□ 1.66
CCDC78-202ENST00000345165 COL24A1Q17RW2 1714 aa25.42■■□□□ 1.66
CCDC78-202ENST00000345165 HMOX1P09601 288 aa25.41■■□□□ 1.66
CCDC78-202ENST00000345165 ZNF827Q17R98 1081 aa25.41■■□□□ 1.66
CCDC78-202ENST00000345165 C4BP0C0L5 1744 aa25.4■■□□□ 1.66
CCDC78-202ENST00000345165 RALBP1Q15311 655 aa25.39■■□□□ 1.66
CCDC78-202ENST00000345165 SLC16A10Q8TF71 515 aa25.39■■□□□ 1.66
CCDC78-202ENST00000345165 CNGB1Q14028 1251 aaPredicted RBP25.38■■□□□ 1.65
CCDC78-202ENST00000345165 U2SURPO15042 1029 aaKnown RBP25.37■■□□□ 1.65
CCDC78-202ENST00000345165 MTFR1LQ9H019 292 aa25.37■■□□□ 1.65
CCDC78-202ENST00000345165 LOC102724428A0A0B4J2F2 783 aa25.36■■□□□ 1.65
CCDC78-202ENST00000345165 SIK1P57059 783 aa25.36■■□□□ 1.65
CCDC78-202ENST00000345165 ATG3Q9NT62 314 aa25.36■■□□□ 1.65
CCDC78-202ENST00000345165 CABP4P57796 275 aa25.35■■□□□ 1.65
CCDC78-202ENST00000345165 GAS2L2Q8NHY3 880 aa25.35■■□□□ 1.65
CCDC78-202ENST00000345165 ASAP1Q9ULH1 1129 aa25.35■■□□□ 1.65
CCDC78-202ENST00000345165 FCHSD2O94868 740 aa25.34■■□□□ 1.65
CCDC78-202ENST00000345165 MTHFSDQ2M296 383 aaKnown RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms