RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 DCTN1Q14203 1278 aa28.5■■■□□ 2.15
CACNB1-201ENST00000344140 RGPD2P0DJD1 1756 aa28.5■■■□□ 2.15
CACNB1-201ENST00000344140 GNAT3A8MTJ3 354 aa28.49■■■□□ 2.15
CACNB1-201ENST00000344140 RARSP54136 660 aaKnown RBP28.49■■■□□ 2.15
CACNB1-201ENST00000344140 PPP4R2Q9NY27 417 aa28.49■■■□□ 2.15
CACNB1-201ENST00000344140 ABCA3Q99758 1704 aa28.48■■■□□ 2.15
CACNB1-201ENST00000344140 LMO7Q8WWI1 1683 aa28.47■■■□□ 2.15
CACNB1-201ENST00000344140 AMOTQ4VCS5 1084 aa28.47■■■□□ 2.15
CACNB1-201ENST00000344140 MCM10Q7L590 875 aa28.47■■■□□ 2.15
CACNB1-201ENST00000344140 PLIN1O60240 522 aa28.46■■■□□ 2.15
CACNB1-201ENST00000344140 PLEKHO1Q53GL0 409 aaPredicted RBP28.46■■■□□ 2.15
CACNB1-201ENST00000344140 FAM208AQ9UK61 1670 aaKnown RBP28.46■■■□□ 2.15
CACNB1-201ENST00000344140 MAP3K5Q99683 1374 aa28.46■■■□□ 2.15
CACNB1-201ENST00000344140 BCAR3O75815 825 aa28.46■■■□□ 2.15
CACNB1-201ENST00000344140 CSB-PGBD3P0DP91 1061 aa28.46■■■□□ 2.15
CACNB1-201ENST00000344140 NLRP2Q9NX02 1062 aa28.46■■■□□ 2.15
CACNB1-201ENST00000344140 MBIPQ9NS73 344 aa28.45■■■□□ 2.15
CACNB1-201ENST00000344140 CRB1P82279 1406 aa28.43■■■□□ 2.14
CACNB1-201ENST00000344140 ZNF428Q96B54 188 aa28.43■■■□□ 2.14
CACNB1-201ENST00000344140 CHL1O00533 1208 aa28.42■■■□□ 2.14
CACNB1-201ENST00000344140 PLEKHG2Q9H7P9 1386 aa28.42■■■□□ 2.14
CACNB1-201ENST00000344140 RAPGEF4Q8WZA2 1011 aa28.4■■■□□ 2.14
CACNB1-201ENST00000344140 NUTM2BA6NNL0 878 aaPredicted RBP28.39■■■□□ 2.14
CACNB1-201ENST00000344140 NUTM2EB1AL46 878 aaPredicted RBP28.39■■■□□ 2.14
CACNB1-201ENST00000344140 NUTM2AQ8IVF1 878 aaPredicted RBP28.39■■■□□ 2.14
CACNB1-201ENST00000344140 SPATA31A6Q5VVP1 1343 aa28.38■■■□□ 2.13
CACNB1-201ENST00000344140 WDR17Q8IZU2 1322 aa28.38■■■□□ 2.13
CACNB1-201ENST00000344140 AKAP4Q5JQC9 854 aa28.38■■■□□ 2.13
CACNB1-201ENST00000344140 ZNF530Q6P9A1 599 aaPredicted RBP28.38■■■□□ 2.13
CACNB1-201ENST00000344140 LRRC37A3O60309 1634 aa28.36■■■□□ 2.13
CACNB1-201ENST00000344140 COL5A2P05997 1499 aaPredicted RBP28.36■■■□□ 2.13
CACNB1-201ENST00000344140 TATP17735 454 aaPredicted RBP28.36■■■□□ 2.13
CACNB1-201ENST00000344140 CANXP27824 592 aaKnown RBP28.36■■■□□ 2.13
CACNB1-201ENST00000344140 ALDH1L2Q3SY69 923 aa28.36■■■□□ 2.13
CACNB1-201ENST00000344140 IL17REQ8NFR9 667 aa28.36■■■□□ 2.13
CACNB1-201ENST00000344140 PDE3AQ14432 1141 aa28.35■■■□□ 2.13
CACNB1-201ENST00000344140 C1orf141Q5JVX7 400 aa28.35■■■□□ 2.13
CACNB1-201ENST00000344140 EXOC6Q8TAG9 804 aa28.35■■■□□ 2.13
CACNB1-201ENST00000344140 BABAM1Q9NWV8 329 aa28.35■■■□□ 2.13
CACNB1-201ENST00000344140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.35■■■□□ 2.13
CACNB1-201ENST00000344140 SMC4Q9NTJ3 1288 aa28.34■■■□□ 2.13
CACNB1-201ENST00000344140 C20orf194Q5TEA3 1177 aa28.34■■■□□ 2.13
CACNB1-201ENST00000344140 CEMIPQ8WUJ3 1361 aa28.33■■■□□ 2.13
CACNB1-201ENST00000344140 VAMP4O75379 141 aa28.33■■■□□ 2.13
CACNB1-201ENST00000344140 SSH1Q8WYL5 1049 aa28.33■■■□□ 2.13
CACNB1-201ENST00000344140 ADAMTS2O95450 1211 aa28.32■■■□□ 2.12
CACNB1-201ENST00000344140 TWISTNBQ3B726 338 aaPredicted RBP28.32■■■□□ 2.12
CACNB1-201ENST00000344140 CRBNQ96SW2 442 aa28.32■■■□□ 2.12
CACNB1-201ENST00000344140 BCL2L13Q9BXK5 485 aa28.32■■■□□ 2.12
CACNB1-201ENST00000344140 TOM1L2Q6ZVM7 507 aa28.32■■■□□ 2.12
CACNB1-201ENST00000344140 FRAT1Q92837 279 aaPredicted RBP28.32■■■□□ 2.12
CACNB1-201ENST00000344140 TSPYL4Q9UJ04 414 aa28.32■■■□□ 2.12
CACNB1-201ENST00000344140 SPG7Q9UQ90 795 aa28.31■■■□□ 2.12
CACNB1-201ENST00000344140 TAF7Q15545 349 aaPredicted RBP28.3■■■□□ 2.12
CACNB1-201ENST00000344140 TSPYL6Q8N831 410 aa28.3■■■□□ 2.12
CACNB1-201ENST00000344140 C8orf58Q8NAV2 365 aa28.3■■■□□ 2.12
CACNB1-201ENST00000344140 EVA1CP58658 441 aa28.29■■■□□ 2.12
CACNB1-201ENST00000344140 OVOS2A0A0G2JMS6 1433 aa28.29■■■□□ 2.12
CACNB1-201ENST00000344140 MEGF6O75095 1541 aa28.29■■■□□ 2.12
CACNB1-201ENST00000344140 BRPF1P55201 1214 aaPredicted RBP28.29■■■□□ 2.12
CACNB1-201ENST00000344140 CARD10Q9BWT7 1032 aa28.29■■■□□ 2.12
CACNB1-201ENST00000344140 KIF16BQ96L93 1317 aa28.27■■■□□ 2.12
CACNB1-201ENST00000344140 MS4A1P11836 297 aa28.27■■■□□ 2.12
CACNB1-201ENST00000344140 ZKSCAN2Q63HK3 967 aa28.27■■■□□ 2.12
CACNB1-201ENST00000344140 COL14A1Q05707 1796 aaKnown RBP28.27■■■□□ 2.12
CACNB1-201ENST00000344140 LRP6O75581 1613 aa28.26■■■□□ 2.11
CACNB1-201ENST00000344140 ELL2O00472 640 aaPredicted RBP28.25■■■□□ 2.11
CACNB1-201ENST00000344140 B4GALNT3Q6L9W6 998 aa28.25■■■□□ 2.11
CACNB1-201ENST00000344140 CCDC136Q96JN2 1154 aa28.25■■■□□ 2.11
CACNB1-201ENST00000344140 STRN4Q9NRL3 753 aa28.25■■■□□ 2.11
CACNB1-201ENST00000344140 MIS18AQ9NYP9 233 aa28.25■■■□□ 2.11
CACNB1-201ENST00000344140 PELP1Q8IZL8 1130 aaKnown RBP28.25■■■□□ 2.11
CACNB1-201ENST00000344140 LGR6Q9HBX8 967 aa28.25■■■□□ 2.11
CACNB1-201ENST00000344140 IPO8O15397 1037 aaKnown RBP28.24■■■□□ 2.11
CACNB1-201ENST00000344140 RNMTO43148 476 aaKnown RBP28.24■■■□□ 2.11
CACNB1-201ENST00000344140 MEX3CQ5U5Q3 659 aaKnown RBP28.24■■■□□ 2.11
CACNB1-201ENST00000344140 BTG4Q9NY30 223 aa28.24■■■□□ 2.11
CACNB1-201ENST00000344140 TEFQ10587 303 aa28.23■■■□□ 2.11
CACNB1-201ENST00000344140 MPRIPQ6WCQ1 1025 aa28.23■■■□□ 2.11
CACNB1-201ENST00000344140 LARP1Q6PKG0 1096 aaKnown RBP28.23■■■□□ 2.11
CACNB1-201ENST00000344140 IFNL2Q8IZJ0 200 aa28.21■■■□□ 2.11
CACNB1-201ENST00000344140 SOS1Q07889 1333 aaPredicted RBP28.21■■■□□ 2.11
CACNB1-201ENST00000344140 PKD1L3Q7Z443 1732 aa28.2■■■□□ 2.11
CACNB1-201ENST00000344140 PHKG2P15735 406 aa28.2■■■□□ 2.1
CACNB1-201ENST00000344140 ATF7IPQ6VMQ6 1270 aa28.2■■■□□ 2.1
CACNB1-201ENST00000344140 MRPL50Q8N5N7 158 aaKnown RBP28.2■■■□□ 2.1
CACNB1-201ENST00000344140 C8orf37Q96NL8 207 aa28.2■■■□□ 2.1
CACNB1-201ENST00000344140 NOB1Q9ULX3 412 aaKnown RBP28.2■■■□□ 2.1
CACNB1-201ENST00000344140 PANK1Q8TE04 598 aa28.19■■■□□ 2.1
CACNB1-201ENST00000344140 PARP4Q9UKK3 1724 aaKnown RBP28.19■■■□□ 2.1
CACNB1-201ENST00000344140 PLCH1Q4KWH8 1693 aa28.19■■■□□ 2.1
CACNB1-201ENST00000344140 IL2RBP14784 551 aa28.19■■■□□ 2.1
CACNB1-201ENST00000344140 KRT24Q2M2I5 525 aa28.19■■■□□ 2.1
CACNB1-201ENST00000344140 ADAMTS7Q9UKP4 1686 aa28.18■■■□□ 2.1
CACNB1-201ENST00000344140 HSP90AB1P08238 724 aaKnown RBP28.18■■■□□ 2.1
CACNB1-201ENST00000344140 DZIP1LQ8IYY4 767 aaKnown RBP28.18■■■□□ 2.1
CACNB1-201ENST00000344140 NGLY1Q96IV0 654 aa28.18■■■□□ 2.1
CACNB1-201ENST00000344140 FTSJ3Q8IY81 847 aaKnown RBP28.17■■■□□ 2.1
CACNB1-201ENST00000344140 ARHGAP45Q92619 1136 aa28.17■■■□□ 2.1
CACNB1-201ENST00000344140 TRIM27P14373 513 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms