RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PLEKHG5O94827 1062 aa23.75■■□□□ 1.39
HOXA9-201ENST00000343483 HSPA1LP34931 641 aa23.75■■□□□ 1.39
HOXA9-201ENST00000343483 TWISTNBQ3B726 338 aaPredicted RBP23.75■■□□□ 1.39
HOXA9-201ENST00000343483 LMOD2Q6P5Q4 547 aa23.75■■□□□ 1.39
HOXA9-201ENST00000343483 C1orf167Q5SNV9 1468 aa23.75■■□□□ 1.39
HOXA9-201ENST00000343483 ROBO1Q9Y6N7 1651 aa23.75■■□□□ 1.39
HOXA9-201ENST00000343483 KCNH5Q8NCM2 988 aa23.74■■□□□ 1.39
HOXA9-201ENST00000343483 MST1RQ04912 1400 aa23.74■■□□□ 1.39
HOXA9-201ENST00000343483 ITPRIPQ8IWB1 547 aa23.74■■□□□ 1.39
HOXA9-201ENST00000343483 C8orf58Q8NAV2 365 aa23.74■■□□□ 1.39
HOXA9-201ENST00000343483 NFAT5O94916 1531 aa23.73■■□□□ 1.39
HOXA9-201ENST00000343483 RTF1Q92541 710 aaKnown RBP23.72■■□□□ 1.39
HOXA9-201ENST00000343483 PCDHB15Q9Y5E8 787 aa23.72■■□□□ 1.39
HOXA9-201ENST00000343483 IP6K1Q92551 441 aa23.72■■□□□ 1.39
HOXA9-201ENST00000343483 NPM2Q86SE8 214 aaKnown RBP23.71■■□□□ 1.39
HOXA9-201ENST00000343483 GAS2L2Q8NHY3 880 aa23.71■■□□□ 1.39
HOXA9-201ENST00000343483 DDX17Q92841 729 aaKnown RBP23.71■■□□□ 1.39
HOXA9-201ENST00000343483 DCCP43146 1447 aa23.71■■□□□ 1.39
HOXA9-201ENST00000343483 KRT28Q7Z3Y7 464 aa23.71■■□□□ 1.39
HOXA9-201ENST00000343483 CHL1O00533 1208 aa23.7■■□□□ 1.38
HOXA9-201ENST00000343483 BRPF1P55201 1214 aaPredicted RBP23.7■■□□□ 1.38
HOXA9-201ENST00000343483 LTN1O94822 1766 aa23.7■■□□□ 1.38
HOXA9-201ENST00000343483 BRINP3Q76B58 766 aa23.69■■□□□ 1.38
HOXA9-201ENST00000343483 TMEM57Q8N5G2 664 aa23.69■■□□□ 1.38
HOXA9-201ENST00000343483 MRPL50Q8N5N7 158 aaKnown RBP23.69■■□□□ 1.38
HOXA9-201ENST00000343483 DDX19BQ9UMR2 479 aa23.69■■□□□ 1.38
HOXA9-201ENST00000343483 USHBP1Q8N6Y0 703 aa23.69■■□□□ 1.38
HOXA9-201ENST00000343483 RGS3P49796 1198 aa23.68■■□□□ 1.38
HOXA9-201ENST00000343483 GCP02774 474 aa23.68■■□□□ 1.38
HOXA9-201ENST00000343483 CRB1P82279 1406 aa23.67■■□□□ 1.38
HOXA9-201ENST00000343483 ZBTB47Q9UFB7 747 aaPredicted RBP23.67■■□□□ 1.38
HOXA9-201ENST00000343483 KIF1AQ12756 1690 aa23.67■■□□□ 1.38
HOXA9-201ENST00000343483 KRT24Q2M2I5 525 aa23.66■■□□□ 1.38
HOXA9-201ENST00000343483 RWDD1Q9H446 243 aaPredicted RBP23.64■■□□□ 1.38
HOXA9-201ENST00000343483 MIS18AQ9NYP9 233 aa23.64■■□□□ 1.38
HOXA9-201ENST00000343483 ARHGAP45Q92619 1136 aa23.63■■□□□ 1.37
HOXA9-201ENST00000343483 SLIT3O75094 1523 aa23.63■■□□□ 1.37
HOXA9-201ENST00000343483 GNAT3A8MTJ3 354 aa23.63■■□□□ 1.37
HOXA9-201ENST00000343483 NBPF6Q5VWK0 638 aa23.63■■□□□ 1.37
HOXA9-201ENST00000343483 NBPF4Q96M43 638 aa23.63■■□□□ 1.37
HOXA9-201ENST00000343483 TRPM3Q9HCF6 1732 aaPredicted RBP23.63■■□□□ 1.37
HOXA9-201ENST00000343483 USP19O94966 1318 aa23.62■■□□□ 1.37
HOXA9-201ENST00000343483 ARHGEF25Q86VW2 580 aa23.62■■□□□ 1.37
HOXA9-201ENST00000343483 TSPYL4Q9UJ04 414 aa23.62■■□□□ 1.37
HOXA9-201ENST00000343483 HTATSF1O43719 755 aaKnown RBP23.61■■□□□ 1.37
HOXA9-201ENST00000343483 HAP1P54257 671 aaPredicted RBP23.61■■□□□ 1.37
HOXA9-201ENST00000343483 KIAA0232Q92628 1395 aa23.61■■□□□ 1.37
HOXA9-201ENST00000343483 MAP3K5Q99683 1374 aa23.6■■□□□ 1.37
HOXA9-201ENST00000343483 LRRC59Q96AG4 307 aaKnown RBP23.6■■□□□ 1.37
HOXA9-201ENST00000343483 ZBTB40Q9NUA8 1239 aa23.6■■□□□ 1.37
HOXA9-201ENST00000343483 PHRF1Q9P1Y6 1649 aaKnown RBP23.59■■□□□ 1.37
HOXA9-201ENST00000343483 FAM161AQ3B820 660 aa23.58■■□□□ 1.37
HOXA9-201ENST00000343483 PHLPP1O60346 1717 aa23.58■■□□□ 1.36
HOXA9-201ENST00000343483 API5Q9BZZ5 524 aaKnown RBP23.56■■□□□ 1.36
HOXA9-201ENST00000343483 ABCC4O15439 1325 aa23.56■■□□□ 1.36
HOXA9-201ENST00000343483 ANKRD24Q8TF21 1146 aa23.55■■□□□ 1.36
HOXA9-201ENST00000343483 IL17REQ8NFR9 667 aa23.55■■□□□ 1.36
HOXA9-201ENST00000343483 ZC3H6P61129 1189 aaKnown RBP23.54■■□□□ 1.36
HOXA9-201ENST00000343483 HDAC1Q13547 482 aaPredicted RBP23.54■■□□□ 1.36
HOXA9-201ENST00000343483 C8orf34Q49A92 452 aa23.54■■□□□ 1.36
HOXA9-201ENST00000343483 NPHP3Q7Z494 1330 aa23.54■■□□□ 1.36
HOXA9-201ENST00000343483 PDZRN3Q9UPQ7 1066 aa23.53■■□□□ 1.36
HOXA9-201ENST00000343483 AXIN2Q9Y2T1 843 aa23.53■■□□□ 1.36
HOXA9-201ENST00000343483 LRRC37A3O60309 1634 aa23.53■■□□□ 1.36
HOXA9-201ENST00000343483 COL16A1Q07092 1604 aaPredicted RBP23.52■■□□□ 1.36
HOXA9-201ENST00000343483 ALS2Q96Q42 1657 aa23.52■■□□□ 1.36
HOXA9-201ENST00000343483 CHMP4BQ9H444 224 aaKnown RBP23.52■■□□□ 1.36
HOXA9-201ENST00000343483 ZBTB7BO15156 539 aaPredicted RBP23.52■■□□□ 1.35
HOXA9-201ENST00000343483 NHSL1Q5SYE7 1610 aa23.51■■□□□ 1.35
HOXA9-201ENST00000343483 MED1Q15648 1581 aaPredicted RBP23.5■■□□□ 1.35
HOXA9-201ENST00000343483 AHDC1Q5TGY3 1603 aaPredicted RBP23.5■■□□□ 1.35
HOXA9-201ENST00000343483 SLC4A2P04920 1241 aa23.49■■□□□ 1.35
HOXA9-201ENST00000343483 TAF7Q15545 349 aaPredicted RBP23.49■■□□□ 1.35
HOXA9-201ENST00000343483 RGPD2P0DJD1 1756 aa23.49■■□□□ 1.35
HOXA9-201ENST00000343483 DDRGK1Q96HY6 314 aa23.48■■□□□ 1.35
HOXA9-201ENST00000343483 C1orf115Q9H7X2 142 aa23.48■■□□□ 1.35
HOXA9-201ENST00000343483 PLEKHO1Q53GL0 409 aaPredicted RBP23.47■■□□□ 1.35
HOXA9-201ENST00000343483 ZNF530Q6P9A1 599 aaPredicted RBP23.47■■□□□ 1.35
HOXA9-201ENST00000343483 TNS3Q68CZ2 1445 aa23.47■■□□□ 1.35
HOXA9-201ENST00000343483 PTPRCP08575 1304 aa23.47■■□□□ 1.35
HOXA9-201ENST00000343483 CABLES1Q8TDN4 633 aa23.47■■□□□ 1.35
HOXA9-201ENST00000343483 ERBB3P21860 1342 aa23.46■■□□□ 1.35
HOXA9-201ENST00000343483 BABAM1Q9NWV8 329 aa23.45■■□□□ 1.35
HOXA9-201ENST00000343483 CEMIPQ8WUJ3 1361 aa23.45■■□□□ 1.34
HOXA9-201ENST00000343483 RGS12O14924 1447 aa23.45■■□□□ 1.34
HOXA9-201ENST00000343483 NCAPD2Q15021 1401 aa23.45■■□□□ 1.34
HOXA9-201ENST00000343483 AMOTQ4VCS5 1084 aa23.45■■□□□ 1.34
HOXA9-201ENST00000343483 LGR6Q9HBX8 967 aa23.45■■□□□ 1.34
HOXA9-201ENST00000343483 PXDNQ92626 1479 aa23.44■■□□□ 1.34
HOXA9-201ENST00000343483 NBR1Q14596 966 aa23.44■■□□□ 1.34
HOXA9-201ENST00000343483 AKAP4Q5JQC9 854 aa23.44■■□□□ 1.34
HOXA9-201ENST00000343483 SOS2Q07890 1332 aaPredicted RBP23.44■■□□□ 1.34
HOXA9-201ENST00000343483 SMC5Q8IY18 1101 aa23.44■■□□□ 1.34
HOXA9-201ENST00000343483 STK31Q9BXU1 1019 aa23.44■■□□□ 1.34
HOXA9-201ENST00000343483 SPATA31A3Q5VYP0 1347 aa23.43■■□□□ 1.34
HOXA9-201ENST00000343483 INTS3Q68E01 1043 aaKnown RBP23.43■■□□□ 1.34
HOXA9-201ENST00000343483 C1orf141Q5JVX7 400 aa23.42■■□□□ 1.34
HOXA9-201ENST00000343483 NECTIN2Q92692 538 aa23.42■■□□□ 1.34
HOXA9-201ENST00000343483 MPRIPQ6WCQ1 1025 aa23.41■■□□□ 1.34
HOXA9-201ENST00000343483 G2E3Q7L622 706 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms