RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 ESCO1Q5FWF5 840 aa14.27□□□□□ -0.12
SEMA6A-202ENST00000343348 CCDC148Q8NFR7 591 aa14.27□□□□□ -0.12
SEMA6A-202ENST00000343348 RAI14Q9P0K7 980 aa14.27□□□□□ -0.12
SEMA6A-202ENST00000343348 NOL7Q9UMY1 257 aaKnown RBP14.27□□□□□ -0.12
SEMA6A-202ENST00000343348 CCDC184Q52MB2 194 aa14.27□□□□□ -0.13
SEMA6A-202ENST00000343348 GIMAP7Q8NHV1 300 aa14.27□□□□□ -0.13
SEMA6A-202ENST00000343348 SRGAP3O43295 1099 aa14.27□□□□□ -0.13
SEMA6A-202ENST00000343348 EZRP15311 586 aaKnown RBP14.27□□□□□ -0.13
SEMA6A-202ENST00000343348 IQCEQ6IPM2 695 aa14.27□□□□□ -0.13
SEMA6A-202ENST00000343348 URI1O94763 535 aaPredicted RBP14.27□□□□□ -0.13
SEMA6A-202ENST00000343348 PTPN14Q15678 1187 aa14.27□□□□□ -0.13
SEMA6A-202ENST00000343348 CRACR2AQ9BSW2 395 aa14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 NACAP1Q9BZK3 213 aa14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 PLEKHO1Q53GL0 409 aaPredicted RBP14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 ATF7IPQ6VMQ6 1270 aa14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 TAF4BQ92750 862 aa14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 CCT4P50991 539 aaKnown RBP14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 NBPF1Q3BBV0 1214 aa14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 GNL3LQ9NVN8 582 aaKnown RBP14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 SMTNL1A8MU46 457 aa14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 GPATCH11Q8N954 259 aa14.26□□□□□ -0.13
SEMA6A-202ENST00000343348 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
SEMA6A-202ENST00000343348 USP8P40818 1118 aa14.25□□□□□ -0.13
SEMA6A-202ENST00000343348 INCENPQ9NQS7 918 aa14.25□□□□□ -0.13
SEMA6A-202ENST00000343348 RNF187Q5TA31 235 aaPredicted RBP14.25□□□□□ -0.13
SEMA6A-202ENST00000343348 ZHX1Q9UKY1 873 aaPredicted RBP14.25□□□□□ -0.13
SEMA6A-202ENST00000343348 CABP4P57796 275 aa14.25□□□□□ -0.13
SEMA6A-202ENST00000343348 CCDC57Q2TAC2 916 aa14.25□□□□□ -0.13
SEMA6A-202ENST00000343348 ZSCAN30Q86W11 494 aa14.25□□□□□ -0.13
SEMA6A-202ENST00000343348 CCDC97Q96F63 343 aaPredicted RBP14.25□□□□□ -0.13
SEMA6A-202ENST00000343348 MIS18AQ9NYP9 233 aa14.25□□□□□ -0.13
SEMA6A-202ENST00000343348 PRKCSHP14314 528 aaPredicted RBP14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 ZNF76P36508 570 aa14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 PRAM1Q96QH2 718 aa14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 CPLX3Q8WVH0 158 aa14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 UBAC1Q9BSL1 405 aa14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 CCDC178Q5BJE1 867 aa14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 TXLNBQ8N3L3 684 aa14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 CGNQ9P2M7 1197 aaKnown RBP14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 TNNT1P13805 278 aa14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 MPHOSPH8Q99549 860 aa14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 EXOC6BQ9Y2D4 811 aa14.24□□□□□ -0.13
SEMA6A-202ENST00000343348 JAKMIP3Q5VZ66 844 aa14.23□□□□□ -0.13
SEMA6A-202ENST00000343348 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
SEMA6A-202ENST00000343348 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
SEMA6A-202ENST00000343348 NEBLO76041 1014 aa14.23□□□□□ -0.13
SEMA6A-202ENST00000343348 IPO4Q8TEX9 1081 aaKnown RBP14.23□□□□□ -0.13
SEMA6A-202ENST00000343348 SHTN1A0MZ66 631 aa14.23□□□□□ -0.13
SEMA6A-202ENST00000343348 C16orf45Q96MC5 204 aaPredicted RBP14.23□□□□□ -0.13
SEMA6A-202ENST00000343348 SMARCA2P51531 1590 aa14.23□□□□□ -0.13
SEMA6A-202ENST00000343348 ZNF397Q8NF99 534 aaPredicted RBP14.23□□□□□ -0.13
SEMA6A-202ENST00000343348 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 UBE4AQ14139 1066 aa14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 TMEM57Q8N5G2 664 aa14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 IDH1O75874 414 aaKnown RBP14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 KIF4BQ2VIQ3 1234 aa14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 CKAP2LQ8IYA6 745 aa14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 CCDC82Q8N4S0 544 aa14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 RRS1Q15050 365 aaKnown RBP14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 BMP2KQ9NSY1 1161 aaPredicted RBP14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 NF2P35240 595 aa14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 ZBTB9Q96C00 473 aa14.22□□□□□ -0.13
SEMA6A-202ENST00000343348 PTPRGP23470 1445 aa14.21□□□□□ -0.13
SEMA6A-202ENST00000343348 MPHOSPH10O00566 681 aaKnown RBP14.21□□□□□ -0.13
SEMA6A-202ENST00000343348 TXNDC2Q86VQ3 553 aa14.21□□□□□ -0.13
SEMA6A-202ENST00000343348 CLIP2Q9UDT6 1046 aa14.21□□□□□ -0.13
SEMA6A-202ENST00000343348 CDKL5O76039 1030 aa14.21□□□□□ -0.13
SEMA6A-202ENST00000343348 GTF2F1P35269 517 aaKnown RBP eCLIP14.21□□□□□ -0.13
SEMA6A-202ENST00000343348 ISM2Q6H9L7 571 aa14.21□□□□□ -0.13
SEMA6A-202ENST00000343348 SRRTQ9BXP5 876 aaKnown RBP14.21□□□□□ -0.14
SEMA6A-202ENST00000343348 GDPD2Q9HCC8 539 aa14.21□□□□□ -0.14
SEMA6A-202ENST00000343348 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.14
SEMA6A-202ENST00000343348 SFPQP23246 707 aaKnown RBP eCLIP14.21□□□□□ -0.14
SEMA6A-202ENST00000343348 SPA17Q15506 151 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 LRP2BPQ9P2M1 347 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 USP25Q9UHP3 1055 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 SSFA2P28290 1259 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 PRPF40BQ6NWY9 871 aaKnown RBP14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 SLC26A8Q96RN1 970 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 UBA5Q9GZZ9 404 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 KIF5CO60282 957 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 IFFO1Q0D2I5 559 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 BICDL1Q6ZP65 573 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 ZSCAN31Q96LW9 406 aaPredicted RBP14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 MYOM3Q5VTT5 1437 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 CHMP4BP1P59074 171 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 PPP4R3BQ5MIZ7 849 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 KIF18AQ8NI77 898 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 CTNNBL1Q8WYA6 563 aaPredicted RBP14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 CDK19Q9BWU1 502 aa14.2□□□□□ -0.14
SEMA6A-202ENST00000343348 SMG6Q86US8 1419 aaKnown RBP14.19□□□□□ -0.14
SEMA6A-202ENST00000343348 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
SEMA6A-202ENST00000343348 TATP17735 454 aaPredicted RBP14.19□□□□□ -0.14
SEMA6A-202ENST00000343348 FGD6Q6ZV73 1430 aa14.19□□□□□ -0.14
SEMA6A-202ENST00000343348 NUTM2BA6NNL0 878 aaPredicted RBP14.19□□□□□ -0.14
SEMA6A-202ENST00000343348 BTBD11A6QL63 1104 aa14.19□□□□□ -0.14
SEMA6A-202ENST00000343348 NUTM2EB1AL46 878 aaPredicted RBP14.19□□□□□ -0.14
SEMA6A-202ENST00000343348 NUTM2AQ8IVF1 878 aaPredicted RBP14.19□□□□□ -0.14
SEMA6A-202ENST00000343348 CABP1Q9NZU7 370 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms