RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 LTV1Q96GA3 475 aaPredicted RBP25.44■■□□□ 1.66
MUC1-204ENST00000343256 CCNL1Q9UK58 526 aaPredicted RBP25.44■■□□□ 1.66
MUC1-204ENST00000343256 ANKRD36BQ8N2N9 1353 aa25.44■■□□□ 1.66
MUC1-204ENST00000343256 ADCY9O60503 1353 aa25.43■■□□□ 1.66
MUC1-204ENST00000343256 SBNO2Q9Y2G9 1366 aa25.41■■□□□ 1.66
MUC1-204ENST00000343256 WWC3Q9ULE0 1092 aa25.39■■□□□ 1.66
MUC1-204ENST00000343256 CD163L1Q9NR16 1453 aa25.39■■□□□ 1.65
MUC1-204ENST00000343256 L3MBTL2Q969R5 705 aa25.38■■□□□ 1.65
MUC1-204ENST00000343256 ROCK2O75116 1388 aaKnown RBP25.36■■□□□ 1.65
MUC1-204ENST00000343256 CD2APQ9Y5K6 639 aa25.36■■□□□ 1.65
MUC1-204ENST00000343256 TMC1Q8TDI8 760 aa25.35■■□□□ 1.65
MUC1-204ENST00000343256 IP6K1Q92551 441 aa25.35■■□□□ 1.65
MUC1-204ENST00000343256 USP47Q96K76 1375 aa25.33■■□□□ 1.65
MUC1-204ENST00000343256 FAM208AQ9UK61 1670 aaKnown RBP25.33■■□□□ 1.65
MUC1-204ENST00000343256 ZCRB1Q8TBF4 217 aaKnown RBP25.32■■□□□ 1.64
MUC1-204ENST00000343256 RGPD2P0DJD1 1756 aa25.31■■□□□ 1.64
MUC1-204ENST00000343256 KIF3CO14782 793 aa25.31■■□□□ 1.64
MUC1-204ENST00000343256 C5P01031 1676 aa25.31■■□□□ 1.64
MUC1-204ENST00000343256 MEGF6O75095 1541 aa25.31■■□□□ 1.64
MUC1-204ENST00000343256 HDGFL2Q7Z4V5 671 aaPredicted RBP25.3■■□□□ 1.64
MUC1-204ENST00000343256 SLC12A5Q9H2X9 1139 aa25.3■■□□□ 1.64
MUC1-204ENST00000343256 EDC4Q6P2E9 1401 aaKnown RBP25.29■■□□□ 1.64
MUC1-204ENST00000343256 IGSF1Q8N6C5 1336 aa25.28■■□□□ 1.64
MUC1-204ENST00000343256 FBLN1P23142 703 aa25.27■■□□□ 1.64
MUC1-204ENST00000343256 HOXC9P31274 260 aa25.25■■□□□ 1.63
MUC1-204ENST00000343256 SMIM5Q71RC9 77 aa25.25■■□□□ 1.63
MUC1-204ENST00000343256 MAP3K19Q56UN5 1328 aa25.25■■□□□ 1.63
MUC1-204ENST00000343256 A0A1W2PP64 1363 aa25.25■■□□□ 1.63
MUC1-204ENST00000343256 TAF1LQ8IZX4 1826 aa25.24■■□□□ 1.63
MUC1-204ENST00000343256 AMIGO3Q86WK7 504 aa25.24■■□□□ 1.63
MUC1-204ENST00000343256 FLAD1Q8NFF5 587 aa25.23■■□□□ 1.63
MUC1-204ENST00000343256 AMPHP49418 695 aa25.22■■□□□ 1.63
MUC1-204ENST00000343256 APLP1P51693 650 aa25.22■■□□□ 1.63
MUC1-204ENST00000343256 USHBP1Q8N6Y0 703 aa25.22■■□□□ 1.63
MUC1-204ENST00000343256 SIN3AQ96ST3 1273 aa25.22■■□□□ 1.63
MUC1-204ENST00000343256 PALLDQ8WX93 1383 aa25.21■■□□□ 1.63
MUC1-204ENST00000343256 PHF14O94880 888 aa25.21■■□□□ 1.63
MUC1-204ENST00000343256 DNAJC5GQ8N7S2 189 aa25.2■■□□□ 1.62
MUC1-204ENST00000343256 TOGARAM1Q9Y4F4 1720 aa25.2■■□□□ 1.62
MUC1-204ENST00000343256 NBPF6Q5VWK0 638 aa25.19■■□□□ 1.62
MUC1-204ENST00000343256 NBPF4Q96M43 638 aa25.19■■□□□ 1.62
MUC1-204ENST00000343256 TERF2IPQ9NYB0 399 aa25.19■■□□□ 1.62
MUC1-204ENST00000343256 C4BP0C0L5 1744 aa25.19■■□□□ 1.62
MUC1-204ENST00000343256 MPRIPQ6WCQ1 1025 aa25.18■■□□□ 1.62
MUC1-204ENST00000343256 AK7Q96M32 723 aa25.18■■□□□ 1.62
MUC1-204ENST00000343256 NEUROD1Q13562 356 aa25.16■■□□□ 1.62
MUC1-204ENST00000343256 COG3Q96JB2 828 aa25.16■■□□□ 1.62
MUC1-204ENST00000343256 UBR3Q6ZT12 1888 aa25.15■■□□□ 1.62
MUC1-204ENST00000343256 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.14■■□□□ 1.62
MUC1-204ENST00000343256 RAPGEF4Q8WZA2 1011 aa25.14■■□□□ 1.62
MUC1-204ENST00000343256 TOMM70O94826 608 aa25.13■■□□□ 1.61
MUC1-204ENST00000343256 RRS1Q15050 365 aaKnown RBP25.13■■□□□ 1.61
MUC1-204ENST00000343256 CICQ96RK0 1608 aaPredicted RBP25.12■■□□□ 1.61
MUC1-204ENST00000343256 CGNL1Q0VF96 1302 aa25.12■■□□□ 1.61
MUC1-204ENST00000343256 TATP17735 454 aaPredicted RBP25.11■■□□□ 1.61
MUC1-204ENST00000343256 CARD11Q9BXL7 1154 aa25.11■■□□□ 1.61
MUC1-204ENST00000343256 CAPN15O75808 1086 aa25.1■■□□□ 1.61
MUC1-204ENST00000343256 NMRK2Q9NPI5 230 aa25.1■■□□□ 1.61
MUC1-204ENST00000343256 PCDH11XQ9BZA7 1347 aa25.1■■□□□ 1.61
MUC1-204ENST00000343256 PCDH11YQ9BZA8 1340 aa25.1■■□□□ 1.61
MUC1-204ENST00000343256 HMGB2P26583 209 aaKnown RBP25.09■■□□□ 1.61
MUC1-204ENST00000343256 HTRA3P83110 453 aa25.09■■□□□ 1.61
MUC1-204ENST00000343256 COL13A1Q5TAT6 717 aaPredicted RBP25.09■■□□□ 1.61
MUC1-204ENST00000343256 ITGB4P16144 1822 aa25.09■■□□□ 1.61
MUC1-204ENST00000343256 WDR90Q96KV7 1748 aa25.08■■□□□ 1.61
MUC1-204ENST00000343256 RTL1A6NKG5 1358 aa25.07■■□□□ 1.6
MUC1-204ENST00000343256 CYP27B1O15528 508 aa25.07■■□□□ 1.6
MUC1-204ENST00000343256 LINC00116Q8NCU8 138 aa25.07■■□□□ 1.6
MUC1-204ENST00000343256 SMARCC1Q92922 1105 aaPredicted RBP25.07■■□□□ 1.6
MUC1-204ENST00000343256 SSFA2P28290 1259 aa25.06■■□□□ 1.6
MUC1-204ENST00000343256 BCS1LQ9Y276 419 aa25.06■■□□□ 1.6
MUC1-204ENST00000343256 PXDNLA1KZ92 1463 aa25.06■■□□□ 1.6
MUC1-204ENST00000343256 N4BP2Q86UW6 1770 aaPredicted RBP25.05■■□□□ 1.6
MUC1-204ENST00000343256 NSD3Q9BZ95 1437 aa25.05■■□□□ 1.6
MUC1-204ENST00000343256 PIGBQ92521 554 aa25.05■■□□□ 1.6
MUC1-204ENST00000343256 SMG6Q86US8 1419 aaKnown RBP25.04■■□□□ 1.6
MUC1-204ENST00000343256 KIAA1551Q9HCM1 1747 aa25.04■■□□□ 1.6
MUC1-204ENST00000343256 MMP10P09238 476 aa25.03■■□□□ 1.6
MUC1-204ENST00000343256 MAP2P11137 1827 aaKnown RBP25.02■■□□□ 1.6
MUC1-204ENST00000343256 A0A0G2JLW4 131 aa25.02■■□□□ 1.6
MUC1-204ENST00000343256 HSP90AB2PQ58FF8 381 aa25.02■■□□□ 1.6
MUC1-204ENST00000343256 ARHGAP27Q6ZUM4 889 aa25.02■■□□□ 1.6
MUC1-204ENST00000343256 KLRG1Q96E93 195 aa25.02■■□□□ 1.6
MUC1-204ENST00000343256 LOC102724428A0A0B4J2F2 783 aa25.01■■□□□ 1.59
MUC1-204ENST00000343256 GNPATO15228 680 aa25.01■■□□□ 1.59
MUC1-204ENST00000343256 SIK1P57059 783 aa25.01■■□□□ 1.59
MUC1-204ENST00000343256 PUS7Q96PZ0 661 aaKnown RBP25.01■■□□□ 1.59
MUC1-204ENST00000343256 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
MUC1-204ENST00000343256 KIF13BQ9NQT8 1826 aa25■■□□□ 1.59
MUC1-204ENST00000343256 ITPK1Q13572 414 aa24.99■■□□□ 1.59
MUC1-204ENST00000343256 RBM46Q8TBY0 533 aaKnown RBP24.98■■□□□ 1.59
MUC1-204ENST00000343256 JMYQ8N9B5 988 aa24.97■■□□□ 1.59
MUC1-204ENST00000343256 TGFB2P61812 414 aa24.96■■□□□ 1.59
MUC1-204ENST00000343256 C16orf71Q8IYS4 520 aaPredicted RBP24.96■■□□□ 1.59
MUC1-204ENST00000343256 INSRP06213 1382 aa24.95■■□□□ 1.59
MUC1-204ENST00000343256 FYB1O15117 783 aa24.95■■□□□ 1.58
MUC1-204ENST00000343256 FCHSD2O94868 740 aa24.95■■□□□ 1.58
MUC1-204ENST00000343256 DPEP1P16444 411 aa24.95■■□□□ 1.58
MUC1-204ENST00000343256 ATP6V1AP38606 617 aa24.95■■□□□ 1.58
MUC1-204ENST00000343256 TNS4Q8IZW8 715 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms