RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 TSR2Q969E8 191 aaKnown RBP10.4□□□□□ -0.74
CFAP54-201ENST00000342887 A0A1B0GUL6 1792 aa10.4□□□□□ -0.75
CFAP54-201ENST00000342887 ARAP2Q8WZ64 1704 aa10.4□□□□□ -0.75
CFAP54-201ENST00000342887 ZNF831Q5JPB2 1677 aa10.39□□□□□ -0.75
CFAP54-201ENST00000342887 BABAM1Q9NWV8 329 aa10.39□□□□□ -0.75
CFAP54-201ENST00000342887 FLT4P35916 1363 aa10.39□□□□□ -0.75
CFAP54-201ENST00000342887 EIF4A2Q14240 407 aaKnown RBP10.39□□□□□ -0.75
CFAP54-201ENST00000342887 NME9Q86XW9 330 aa10.39□□□□□ -0.75
CFAP54-201ENST00000342887 TMEM57Q8N5G2 664 aa10.39□□□□□ -0.75
CFAP54-201ENST00000342887 NOB1Q9ULX3 412 aaKnown RBP10.39□□□□□ -0.75
CFAP54-201ENST00000342887 RRP7AQ9Y3A4 280 aaKnown RBP10.39□□□□□ -0.75
CFAP54-201ENST00000342887 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
CFAP54-201ENST00000342887 BMP2KLQ5H9B9 411 aa10.38□□□□□ -0.75
CFAP54-201ENST00000342887 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
CFAP54-201ENST00000342887 LAMA4Q16363 1823 aa10.38□□□□□ -0.75
CFAP54-201ENST00000342887 DCCP43146 1447 aa10.38□□□□□ -0.75
CFAP54-201ENST00000342887 AFDNP55196 1824 aaKnown RBP10.38□□□□□ -0.75
CFAP54-201ENST00000342887 ZRANB1Q9UGI0 708 aa10.38□□□□□ -0.75
CFAP54-201ENST00000342887 FSD2A1L4K1 749 aa10.38□□□□□ -0.75
CFAP54-201ENST00000342887 HTATSF1O43719 755 aaKnown RBP10.38□□□□□ -0.75
CFAP54-201ENST00000342887 NUTM2DQ5VT03 806 aaPredicted RBP10.38□□□□□ -0.75
CFAP54-201ENST00000342887 TSPYL6Q8N831 410 aa10.38□□□□□ -0.75
CFAP54-201ENST00000342887 OSBPL3Q9H4L5 887 aa10.38□□□□□ -0.75
CFAP54-201ENST00000342887 ANKRD36CQ5JPF3 1778 aa10.37□□□□□ -0.75
CFAP54-201ENST00000342887 PPM1GO15355 546 aaPredicted RBP10.37□□□□□ -0.75
CFAP54-201ENST00000342887 PODXL2Q9NZ53 605 aa10.37□□□□□ -0.75
CFAP54-201ENST00000342887 CYB5RLQ6IPT4 315 aa10.37□□□□□ -0.75
CFAP54-201ENST00000342887 RIPK4P57078 832 aa10.36□□□□□ -0.75
CFAP54-201ENST00000342887 PXDNQ92626 1479 aa10.36□□□□□ -0.75
CFAP54-201ENST00000342887 LAMB2P55268 1798 aa10.36□□□□□ -0.75
CFAP54-201ENST00000342887 U2AF1L5P0DN76 240 aaPredicted RBP10.36□□□□□ -0.75
CFAP54-201ENST00000342887 PRKAR2BP31323 418 aa10.36□□□□□ -0.75
CFAP54-201ENST00000342887 U2AF1Q01081 240 aaKnown RBP eCLIP10.36□□□□□ -0.75
CFAP54-201ENST00000342887 NFKBIBQ15653 356 aa10.36□□□□□ -0.75
CFAP54-201ENST00000342887 ACEP12821 1306 aa10.36□□□□□ -0.75
CFAP54-201ENST00000342887 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
CFAP54-201ENST00000342887 SPEF2Q9C093 1822 aa10.35□□□□□ -0.75
CFAP54-201ENST00000342887 RWDD1Q9H446 243 aaPredicted RBP10.35□□□□□ -0.75
CFAP54-201ENST00000342887 LRP6O75581 1613 aa10.35□□□□□ -0.75
CFAP54-201ENST00000342887 PTPRCP08575 1304 aa10.35□□□□□ -0.75
CFAP54-201ENST00000342887 CYP2E1P05181 493 aaPredicted RBP10.35□□□□□ -0.75
CFAP54-201ENST00000342887 C8orf58Q8NAV2 365 aa10.35□□□□□ -0.75
CFAP54-201ENST00000342887 TBC1D2Q9BYX2 928 aa10.35□□□□□ -0.75
CFAP54-201ENST00000342887 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
CFAP54-201ENST00000342887 DCTPP1Q9H773 170 aa10.34□□□□□ -0.75
CFAP54-201ENST00000342887 MAP3K19Q56UN5 1328 aa10.34□□□□□ -0.75
CFAP54-201ENST00000342887 GNAI1P63096 354 aa10.34□□□□□ -0.75
CFAP54-201ENST00000342887 GCC1Q96CN9 775 aa10.34□□□□□ -0.75
CFAP54-201ENST00000342887 PHLPP1O60346 1717 aa10.33□□□□□ -0.76
CFAP54-201ENST00000342887 COL15A1P39059 1388 aa10.33□□□□□ -0.76
CFAP54-201ENST00000342887 JCADQ9P266 1359 aa10.33□□□□□ -0.76
CFAP54-201ENST00000342887 LRP5O75197 1615 aa10.33□□□□□ -0.76
CFAP54-201ENST00000342887 GSPT1P15170 499 aaKnown RBP10.32□□□□□ -0.76
CFAP54-201ENST00000342887 CALD1Q05682 793 aaKnown RBP10.32□□□□□ -0.76
CFAP54-201ENST00000342887 USP42Q9H9J4 1324 aaKnown RBP10.32□□□□□ -0.76
CFAP54-201ENST00000342887 FBLN1P23142 703 aa10.31□□□□□ -0.76
CFAP54-201ENST00000342887 PLPPR3Q6T4P5 718 aa10.31□□□□□ -0.76
CFAP54-201ENST00000342887 ROBO1Q9Y6N7 1651 aa10.31□□□□□ -0.76
CFAP54-201ENST00000342887 CNGB1Q14028 1251 aaPredicted RBP10.3□□□□□ -0.76
CFAP54-201ENST00000342887 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
CFAP54-201ENST00000342887 ANKRD44Q8N8A2 993 aa10.3□□□□□ -0.76
CFAP54-201ENST00000342887 ECM29Q5VYK3 1845 aa10.3□□□□□ -0.76
CFAP54-201ENST00000342887 TXNDC2Q86VQ3 553 aa10.3□□□□□ -0.76
CFAP54-201ENST00000342887 STK26Q9P289 416 aa10.3□□□□□ -0.76
CFAP54-201ENST00000342887 DOCK2Q92608 1830 aa10.3□□□□□ -0.76
CFAP54-201ENST00000342887 KCPQ6ZWJ8 1503 aa10.3□□□□□ -0.76
CFAP54-201ENST00000342887 CHGAP10645 457 aaKnown RBP10.3□□□□□ -0.76
CFAP54-201ENST00000342887 LMOD3Q0VAK6 560 aa10.3□□□□□ -0.76
CFAP54-201ENST00000342887 NRAPQ86VF7 1730 aa10.3□□□□□ -0.76
CFAP54-201ENST00000342887 NWD2Q9ULI1 1742 aa10.29□□□□□ -0.76
CFAP54-201ENST00000342887 ITGB4P16144 1822 aa10.29□□□□□ -0.76
CFAP54-201ENST00000342887 BRPF3Q9ULD4 1205 aa10.29□□□□□ -0.76
CFAP54-201ENST00000342887 EPB41L2O43491 1005 aaKnown RBP10.29□□□□□ -0.76
CFAP54-201ENST00000342887 PLEKHM2Q8IWE5 1019 aa10.29□□□□□ -0.76
CFAP54-201ENST00000342887 ZMYND15Q9H091 742 aa10.29□□□□□ -0.76
CFAP54-201ENST00000342887 POGKQ9P215 609 aa10.29□□□□□ -0.76
CFAP54-201ENST00000342887 DAXXQ9UER7 740 aaPredicted RBP10.29□□□□□ -0.76
CFAP54-201ENST00000342887 HDGFP51858 240 aaKnown RBP10.28□□□□□ -0.76
CFAP54-201ENST00000342887 AEBP1Q8IUX7 1158 aa10.28□□□□□ -0.76
CFAP54-201ENST00000342887 KIAA1551Q9HCM1 1747 aa10.28□□□□□ -0.76
CFAP54-201ENST00000342887 CEP85Q6P2H3 762 aa10.28□□□□□ -0.76
CFAP54-201ENST00000342887 SMC4Q9NTJ3 1288 aa10.28□□□□□ -0.76
CFAP54-201ENST00000342887 IPO8O15397 1037 aaKnown RBP10.27□□□□□ -0.76
CFAP54-201ENST00000342887 UTYO14607 1347 aa10.27□□□□□ -0.76
CFAP54-201ENST00000342887 SNRKQ9NRH2 765 aa10.27□□□□□ -0.77
CFAP54-201ENST00000342887 AOX1Q06278 1338 aa10.27□□□□□ -0.77
CFAP54-201ENST00000342887 MYH7P12883 1935 aa10.26□□□□□ -0.77
CFAP54-201ENST00000342887 TNNT2P45379 298 aaPredicted RBP10.26□□□□□ -0.77
CFAP54-201ENST00000342887 COG3Q96JB2 828 aa10.26□□□□□ -0.77
CFAP54-201ENST00000342887 MAP3K5Q99683 1374 aa10.26□□□□□ -0.77
CFAP54-201ENST00000342887 STAP2Q9UGK3 403 aa10.26□□□□□ -0.77
CFAP54-201ENST00000342887 COL16A1Q07092 1604 aaPredicted RBP10.26□□□□□ -0.77
CFAP54-201ENST00000342887 BCORQ6W2J9 1755 aa10.26□□□□□ -0.77
CFAP54-201ENST00000342887 POLA2Q14181 598 aa10.26□□□□□ -0.77
CFAP54-201ENST00000342887 TWISTNBQ3B726 338 aaPredicted RBP10.26□□□□□ -0.77
CFAP54-201ENST00000342887 GSE1Q14687 1217 aa10.25□□□□□ -0.77
CFAP54-201ENST00000342887 BCL2L13Q9BXK5 485 aa10.25□□□□□ -0.77
CFAP54-201ENST00000342887 NPHP4O75161 1426 aaPredicted RBP10.25□□□□□ -0.77
CFAP54-201ENST00000342887 FAM83GA6ND36 823 aa10.25□□□□□ -0.77
CFAP54-201ENST00000342887 HOXC9P31274 260 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms