RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 B4GALNT3Q6L9W6 998 aa22.23■■□□□ 1.15
FRMD4A-202ENST00000342409 CHRNA2Q15822 529 aa22.21■■□□□ 1.15
FRMD4A-202ENST00000342409 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.2■■□□□ 1.14
FRMD4A-202ENST00000342409 BCL2L13Q9BXK5 485 aa22.19■■□□□ 1.14
FRMD4A-202ENST00000342409 COL22A1Q8NFW1 1626 aaPredicted RBP22.19■■□□□ 1.14
FRMD4A-202ENST00000342409 MAP3K5Q99683 1374 aa22.19■■□□□ 1.14
FRMD4A-202ENST00000342409 CHL1O00533 1208 aa22.18■■□□□ 1.14
FRMD4A-202ENST00000342409 HTATSF1O43719 755 aaKnown RBP22.18■■□□□ 1.14
FRMD4A-202ENST00000342409 TSPYL6Q8N831 410 aa22.17■■□□□ 1.14
FRMD4A-202ENST00000342409 SSH1Q8WYL5 1049 aa22.17■■□□□ 1.14
FRMD4A-202ENST00000342409 GNAT3A8MTJ3 354 aa22.16■■□□□ 1.14
FRMD4A-202ENST00000342409 TNNQ9UQP3 1299 aa22.16■■□□□ 1.14
FRMD4A-202ENST00000342409 PHLPP1O60346 1717 aa22.16■■□□□ 1.14
FRMD4A-202ENST00000342409 ADAMTS7Q9UKP4 1686 aa22.16■■□□□ 1.14
FRMD4A-202ENST00000342409 VAMP4O75379 141 aa22.15■■□□□ 1.14
FRMD4A-202ENST00000342409 IL17REQ8NFR9 667 aa22.15■■□□□ 1.14
FRMD4A-202ENST00000342409 SIPA1L3O60292 1781 aaPredicted RBP22.15■■□□□ 1.14
FRMD4A-202ENST00000342409 COL16A1Q07092 1604 aaPredicted RBP22.15■■□□□ 1.14
FRMD4A-202ENST00000342409 PKD1L3Q7Z443 1732 aa22.15■■□□□ 1.14
FRMD4A-202ENST00000342409 C8orf58Q8NAV2 365 aa22.14■■□□□ 1.14
FRMD4A-202ENST00000342409 RTF1Q92541 710 aaKnown RBP22.14■■□□□ 1.13
FRMD4A-202ENST00000342409 KDM3BQ7LBC6 1761 aa22.13■■□□□ 1.13
FRMD4A-202ENST00000342409 PDE3AQ14432 1141 aa22.13■■□□□ 1.13
FRMD4A-202ENST00000342409 FRAT1Q92837 279 aaPredicted RBP22.12■■□□□ 1.13
FRMD4A-202ENST00000342409 SCN11AQ9UI33 1791 aa22.12■■□□□ 1.13
FRMD4A-202ENST00000342409 CEMIPQ8WUJ3 1361 aa22.12■■□□□ 1.13
FRMD4A-202ENST00000342409 MEGF6O75095 1541 aa22.12■■□□□ 1.13
FRMD4A-202ENST00000342409 PANK1Q8TE04 598 aa22.11■■□□□ 1.13
FRMD4A-202ENST00000342409 SMC4Q9NTJ3 1288 aa22.11■■□□□ 1.13
FRMD4A-202ENST00000342409 COL5A2P05997 1499 aaPredicted RBP22.11■■□□□ 1.13
FRMD4A-202ENST00000342409 RLBP1P12271 317 aa22.11■■□□□ 1.13
FRMD4A-202ENST00000342409 ALDH1L2Q3SY69 923 aa22.11■■□□□ 1.13
FRMD4A-202ENST00000342409 CCDC136Q96JN2 1154 aa22.11■■□□□ 1.13
FRMD4A-202ENST00000342409 NLRP2Q9NX02 1062 aa22.11■■□□□ 1.13
FRMD4A-202ENST00000342409 MIS18AQ9NYP9 233 aa22.11■■□□□ 1.13
FRMD4A-202ENST00000342409 KRT24Q2M2I5 525 aa22.1■■□□□ 1.13
FRMD4A-202ENST00000342409 PLEKHO1Q53GL0 409 aaPredicted RBP22.1■■□□□ 1.13
FRMD4A-202ENST00000342409 PRDM11Q9NQV5 511 aa22.1■■□□□ 1.13
FRMD4A-202ENST00000342409 ELL2O00472 640 aaPredicted RBP22.09■■□□□ 1.13
FRMD4A-202ENST00000342409 TWISTNBQ3B726 338 aaPredicted RBP22.09■■□□□ 1.13
FRMD4A-202ENST00000342409 ZNF428Q96B54 188 aa22.09■■□□□ 1.13
FRMD4A-202ENST00000342409 BRPF1P55201 1214 aaPredicted RBP22.09■■□□□ 1.13
FRMD4A-202ENST00000342409 AMOTQ4VCS5 1084 aa22.09■■□□□ 1.13
FRMD4A-202ENST00000342409 ZNF530Q6P9A1 599 aaPredicted RBP22.09■■□□□ 1.13
FRMD4A-202ENST00000342409 PARP4Q9UKK3 1724 aaKnown RBP22.08■■□□□ 1.13
FRMD4A-202ENST00000342409 COL14A1Q05707 1796 aaKnown RBP22.07■■□□□ 1.12
FRMD4A-202ENST00000342409 CANXP27824 592 aaKnown RBP22.07■■□□□ 1.12
FRMD4A-202ENST00000342409 AKAP4Q5JQC9 854 aa22.07■■□□□ 1.12
FRMD4A-202ENST00000342409 LGR6Q9HBX8 967 aa22.07■■□□□ 1.12
FRMD4A-202ENST00000342409 SHANK3Q9BYB0 1731 aa22.07■■□□□ 1.12
FRMD4A-202ENST00000342409 CACNA1FO60840 1977 aa22.06■■□□□ 1.12
FRMD4A-202ENST00000342409 CSB-PGBD3P0DP91 1061 aa22.06■■□□□ 1.12
FRMD4A-202ENST00000342409 MRPL50Q8N5N7 158 aaKnown RBP22.06■■□□□ 1.12
FRMD4A-202ENST00000342409 ZKSCAN2Q63HK3 967 aa22.06■■□□□ 1.12
FRMD4A-202ENST00000342409 WDR17Q8IZU2 1322 aa22.06■■□□□ 1.12
FRMD4A-202ENST00000342409 HAP1P54257 671 aaPredicted RBP22.05■■□□□ 1.12
FRMD4A-202ENST00000342409 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
FRMD4A-202ENST00000342409 NOB1Q9ULX3 412 aaKnown RBP22.05■■□□□ 1.12
FRMD4A-202ENST00000342409 COG6Q9Y2V7 657 aa22.05■■□□□ 1.12
FRMD4A-202ENST00000342409 OVOS2A0A0G2JMS6 1433 aa22.04■■□□□ 1.12
FRMD4A-202ENST00000342409 TRIM27P14373 513 aa22.04■■□□□ 1.12
FRMD4A-202ENST00000342409 PLEKHG2Q9H7P9 1386 aa22.03■■□□□ 1.12
FRMD4A-202ENST00000342409 TAF7Q15545 349 aaPredicted RBP22.03■■□□□ 1.12
FRMD4A-202ENST00000342409 CLUAP1Q96AJ1 413 aa22.03■■□□□ 1.12
FRMD4A-202ENST00000342409 KIF16BQ96L93 1317 aa22.02■■□□□ 1.12
FRMD4A-202ENST00000342409 TCERG1O14776 1098 aaKnown RBP22.02■■□□□ 1.12
FRMD4A-202ENST00000342409 ATF7IPQ6VMQ6 1270 aa22.02■■□□□ 1.12
FRMD4A-202ENST00000342409 MPRIPQ6WCQ1 1025 aa22.02■■□□□ 1.12
FRMD4A-202ENST00000342409 RAPGEF4Q8WZA2 1011 aa22.02■■□□□ 1.12
FRMD4A-202ENST00000342409 RNMTO43148 476 aaKnown RBP22.01■■□□□ 1.11
FRMD4A-202ENST00000342409 BABAM1Q9NWV8 329 aa22.01■■□□□ 1.11
FRMD4A-202ENST00000342409 PLCH1Q4KWH8 1693 aa22.01■■□□□ 1.11
FRMD4A-202ENST00000342409 TATP17735 454 aaPredicted RBP22■■□□□ 1.11
FRMD4A-202ENST00000342409 DZIP1LQ8IYY4 767 aaKnown RBP22■■□□□ 1.11
FRMD4A-202ENST00000342409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22■■□□□ 1.11
FRMD4A-202ENST00000342409 KDM6AO15550 1401 aaPredicted RBP21.99■■□□□ 1.11
FRMD4A-202ENST00000342409 C1orf141Q5JVX7 400 aa21.99■■□□□ 1.11
FRMD4A-202ENST00000342409 AEBP2Q6ZN18 517 aaPredicted RBP21.99■■□□□ 1.11
FRMD4A-202ENST00000342409 TOM1O60784 492 aa21.98■■□□□ 1.11
FRMD4A-202ENST00000342409 WNK3Q9BYP7 1800 aa21.98■■□□□ 1.11
FRMD4A-202ENST00000342409 NRAPQ86VF7 1730 aa21.97■■□□□ 1.11
FRMD4A-202ENST00000342409 MVPQ14764 893 aaKnown RBP21.97■■□□□ 1.11
FRMD4A-202ENST00000342409 LARP1Q6PKG0 1096 aaKnown RBP21.97■■□□□ 1.11
FRMD4A-202ENST00000342409 CARD10Q9BWT7 1032 aa21.97■■□□□ 1.11
FRMD4A-202ENST00000342409 KDM2BQ8NHM5 1336 aa21.96■■□□□ 1.11
FRMD4A-202ENST00000342409 PHKG2P15735 406 aa21.96■■□□□ 1.11
FRMD4A-202ENST00000342409 PIP4K2BP78356 416 aa21.96■■□□□ 1.11
FRMD4A-202ENST00000342409 TOM1L2Q6ZVM7 507 aa21.96■■□□□ 1.11
FRMD4A-202ENST00000342409 IPO8O15397 1037 aaKnown RBP21.95■■□□□ 1.1
FRMD4A-202ENST00000342409 CYP27B1O15528 508 aa21.95■■□□□ 1.1
FRMD4A-202ENST00000342409 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
FRMD4A-202ENST00000342409 ARHGAP45Q92619 1136 aa21.95■■□□□ 1.1
FRMD4A-202ENST00000342409 SPG7Q9UQ90 795 aa21.95■■□□□ 1.1
FRMD4A-202ENST00000342409 MS4A1P11836 297 aa21.94■■□□□ 1.1
FRMD4A-202ENST00000342409 RGS12O14924 1447 aa21.94■■□□□ 1.1
FRMD4A-202ENST00000342409 MRC1P22897 1456 aa21.94■■□□□ 1.1
FRMD4A-202ENST00000342409 KCNQ3O43525 872 aa21.94■■□□□ 1.1
FRMD4A-202ENST00000342409 FTSJ3Q8IY81 847 aaKnown RBP21.94■■□□□ 1.1
FRMD4A-202ENST00000342409 TMEM57Q8N5G2 664 aa21.94■■□□□ 1.1
FRMD4A-202ENST00000342409 STRN4Q9NRL3 753 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms