RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 ABCC2Q92887 1545 aa14.4□□□□□ -0.1
CDH5-201ENST00000341529 JAKMIP1Q96N16 626 aaKnown RBP14.4□□□□□ -0.1
CDH5-201ENST00000341529 BOLA2Q9H3K6 86 aa14.4□□□□□ -0.1
CDH5-201ENST00000341529 A0A1W2PP64 1363 aa14.4□□□□□ -0.1
CDH5-201ENST00000341529 SYCE3A1L190 88 aa14.4□□□□□ -0.1
CDH5-201ENST00000341529 RBM10P98175 930 aaKnown RBP14.4□□□□□ -0.1
CDH5-201ENST00000341529 COL17A1Q9UMD9 1497 aaPredicted RBP14.4□□□□□ -0.1
CDH5-201ENST00000341529 OTUD7AQ8TE49 926 aaPredicted RBP14.4□□□□□ -0.1
CDH5-201ENST00000341529 MTMR7Q9Y216 660 aa14.4□□□□□ -0.1
CDH5-201ENST00000341529 RNF123Q5XPI4 1314 aa14.4□□□□□ -0.1
CDH5-201ENST00000341529 VAMP4O75379 141 aa14.39□□□□□ -0.11
CDH5-201ENST00000341529 ANKRD36BQ8N2N9 1353 aa14.39□□□□□ -0.11
CDH5-201ENST00000341529 PIP4K2BP78356 416 aa14.39□□□□□ -0.11
CDH5-201ENST00000341529 EIF4A2Q14240 407 aaKnown RBP14.39□□□□□ -0.11
CDH5-201ENST00000341529 DUOX2Q9NRD8 1548 aa14.38□□□□□ -0.11
CDH5-201ENST00000341529 PES1O00541 588 aaKnown RBP14.38□□□□□ -0.11
CDH5-201ENST00000341529 ABCC11Q96J66 1382 aa14.38□□□□□ -0.11
CDH5-201ENST00000341529 PI4KAP2A4QPH2 592 aa14.38□□□□□ -0.11
CDH5-201ENST00000341529 PI4KAP1Q8N8J0 262 aa14.38□□□□□ -0.11
CDH5-201ENST00000341529 DDX11Q96FC9 970 aa14.38□□□□□ -0.11
CDH5-201ENST00000341529 TCEANC2Q96MN5 208 aa14.38□□□□□ -0.11
CDH5-201ENST00000341529 KIF3AQ9Y496 699 aa14.38□□□□□ -0.11
CDH5-201ENST00000341529 UHRF1BP1Q6BDS2 1440 aa14.38□□□□□ -0.11
CDH5-201ENST00000341529 POLR3AO14802 1390 aaPredicted RBP14.37□□□□□ -0.11
CDH5-201ENST00000341529 CHRNA2Q15822 529 aa14.37□□□□□ -0.11
CDH5-201ENST00000341529 TOM1L2Q6ZVM7 507 aa14.37□□□□□ -0.11
CDH5-201ENST00000341529 SDSP20132 328 aa14.37□□□□□ -0.11
CDH5-201ENST00000341529 NUCB1Q02818 461 aa14.37□□□□□ -0.11
CDH5-201ENST00000341529 RBM27Q9P2N5 1060 aaKnown RBP14.37□□□□□ -0.11
CDH5-201ENST00000341529 TATP17735 454 aaPredicted RBP14.37□□□□□ -0.11
CDH5-201ENST00000341529 CASTP20810 708 aaKnown RBP14.37□□□□□ -0.11
CDH5-201ENST00000341529 BMP2KLQ5H9B9 411 aa14.37□□□□□ -0.11
CDH5-201ENST00000341529 PRPF40BQ6NWY9 871 aaKnown RBP14.37□□□□□ -0.11
CDH5-201ENST00000341529 CCDC83Q8IWF9 413 aa14.37□□□□□ -0.11
CDH5-201ENST00000341529 ABCC10Q5T3U5 1492 aa14.37□□□□□ -0.11
CDH5-201ENST00000341529 NFXL1Q6ZNB6 911 aa14.36□□□□□ -0.11
CDH5-201ENST00000341529 FKBP4Q02790 459 aaKnown RBP eCLIP14.36□□□□□ -0.11
CDH5-201ENST00000341529 MRPL50Q8N5N7 158 aaKnown RBP14.36□□□□□ -0.11
CDH5-201ENST00000341529 TRIM35Q9UPQ4 493 aa14.36□□□□□ -0.11
CDH5-201ENST00000341529 ZBTB40Q9NUA8 1239 aa14.36□□□□□ -0.11
CDH5-201ENST00000341529 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.36□□□□□ -0.11
CDH5-201ENST00000341529 ESPNB1AK53 854 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 G2E3Q7L622 706 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 CABLES1Q8TDN4 633 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 PHF8Q9UPP1 1060 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 CABP4P57796 275 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 CCAR2Q8N163 923 aaKnown RBP14.35□□□□□ -0.11
CDH5-201ENST00000341529 PRDM11Q9NQV5 511 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 CYP46A1Q9Y6A2 500 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 KDM2BQ8NHM5 1336 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 KAT6BQ8WYB5 2073 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 ZNF518AQ6AHZ1 1483 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 PPP1R42Q7Z4L9 355 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
CDH5-201ENST00000341529 TRDNQ13061 729 aa14.34□□□□□ -0.11
CDH5-201ENST00000341529 HDAC1Q13547 482 aaPredicted RBP14.34□□□□□ -0.11
CDH5-201ENST00000341529 LARP1BQ659C4 914 aaKnown RBP14.34□□□□□ -0.11
CDH5-201ENST00000341529 TTC21BQ7Z4L5 1316 aa14.34□□□□□ -0.11
CDH5-201ENST00000341529 RALYLQ86SE5 291 aaKnown RBP14.34□□□□□ -0.11
CDH5-201ENST00000341529 ITSN2Q9NZM3 1697 aa14.34□□□□□ -0.11
CDH5-201ENST00000341529 ATP5J2-PTCD1G3V325 749 aa14.34□□□□□ -0.11
CDH5-201ENST00000341529 MTHFSDQ2M296 383 aaKnown RBP14.34□□□□□ -0.11
CDH5-201ENST00000341529 LRRC59Q96AG4 307 aaKnown RBP14.34□□□□□ -0.11
CDH5-201ENST00000341529 RRP12Q5JTH9 1297 aaKnown RBP14.34□□□□□ -0.11
CDH5-201ENST00000341529 SASS6Q6UVJ0 657 aa14.34□□□□□ -0.11
CDH5-201ENST00000341529 SLC39A6Q13433 755 aa14.34□□□□□ -0.11
CDH5-201ENST00000341529 MAGI2Q86UL8 1455 aa14.33□□□□□ -0.11
CDH5-201ENST00000341529 MBD5Q9P267 1494 aa14.33□□□□□ -0.11
CDH5-201ENST00000341529 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.12
CDH5-201ENST00000341529 YEATS2Q9ULM3 1422 aa14.33□□□□□ -0.12
CDH5-201ENST00000341529 RAD21O60216 631 aa14.33□□□□□ -0.12
CDH5-201ENST00000341529 CAMK4Q16566 473 aa14.33□□□□□ -0.12
CDH5-201ENST00000341529 MBD3O95983 291 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 KCNA6P17658 529 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 TRIM5Q9C035 493 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 TSPY26PQ9H489 355 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 ARHGEF12Q9NZN5 1544 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 DNAAF4Q8WXU2 420 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 MYD88Q99836 296 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 PIK3C2GO75747 1445 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 TTC22Q5TAA0 569 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 CCDC73Q6ZRK6 1079 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 ADGRL2O95490 1459 aa14.32□□□□□ -0.12
CDH5-201ENST00000341529 BLOC1S2Q6QNY1 142 aa14.31□□□□□ -0.12
CDH5-201ENST00000341529 VPS37DQ86XT2 251 aa14.31□□□□□ -0.12
CDH5-201ENST00000341529 PDRG1Q9NUG6 133 aa14.31□□□□□ -0.12
CDH5-201ENST00000341529 CIZ1Q9ULV3 898 aaPredicted RBP14.31□□□□□ -0.12
CDH5-201ENST00000341529 TNRQ92752 1358 aa14.31□□□□□ -0.12
CDH5-201ENST00000341529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDH5-201ENST00000341529 CPLX2Q6PUV4 134 aaKnown RBP14.31□□□□□ -0.12
CDH5-201ENST00000341529 KIF1BPQ96EK5 621 aa14.31□□□□□ -0.12
CDH5-201ENST00000341529 BAG4O95429 457 aaKnown RBP14.3□□□□□ -0.12
CDH5-201ENST00000341529 MCM2P49736 904 aa14.3□□□□□ -0.12
CDH5-201ENST00000341529 TPM4P67936 248 aa14.3□□□□□ -0.12
CDH5-201ENST00000341529 GUCY1B3Q02153 619 aa14.3□□□□□ -0.12
CDH5-201ENST00000341529 SMC5Q8IY18 1101 aa14.3□□□□□ -0.12
CDH5-201ENST00000341529 ZGPATQ8N5A5 531 aaKnown RBP14.3□□□□□ -0.12
CDH5-201ENST00000341529 CWC22Q9HCG8 908 aaKnown RBP14.3□□□□□ -0.12
CDH5-201ENST00000341529 PA2G4Q9UQ80 394 aaKnown RBP14.3□□□□□ -0.12
CDH5-201ENST00000341529 XRCC6P12956 609 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms