RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 ANKRD62A6NC57 917 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 H0YHG0 523 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 USHBP1Q8N6Y0 703 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 BLOC1S2Q6QNY1 142 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 NSD3Q9BZ95 1437 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 PLEKHH2Q8IVE3 1493 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 MRC2Q9UBG0 1479 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 SPATA32Q96LK8 384 aa13.43□□□□□ -0.26
TNC-201ENST00000341037 CEP126Q9P2H0 1117 aa13.43□□□□□ -0.26
TNC-201ENST00000341037 ARAP1Q96P48 1450 aa13.43□□□□□ -0.26
TNC-201ENST00000341037 WDR33Q9C0J8 1336 aaKnown RBP13.43□□□□□ -0.26
TNC-201ENST00000341037 MCM10Q7L590 875 aa13.43□□□□□ -0.26
TNC-201ENST00000341037 ABCF2Q9UG63 623 aa13.43□□□□□ -0.26
TNC-201ENST00000341037 METTL24Q5JXM2 366 aa13.42□□□□□ -0.26
TNC-201ENST00000341037 CDKL5O76039 1030 aa13.42□□□□□ -0.26
TNC-201ENST00000341037 KRT85P78386 507 aa13.42□□□□□ -0.26
TNC-201ENST00000341037 AIDAQ96BJ3 306 aa13.42□□□□□ -0.26
TNC-201ENST00000341037 DDX11Q96FC9 970 aa13.42□□□□□ -0.26
TNC-201ENST00000341037 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
TNC-201ENST00000341037 ERLIN2O94905 339 aa13.42□□□□□ -0.26
TNC-201ENST00000341037 CASTP20810 708 aaKnown RBP13.42□□□□□ -0.26
TNC-201ENST00000341037 RBM10P98175 930 aaKnown RBP13.42□□□□□ -0.26
TNC-201ENST00000341037 SMARCA5O60264 1052 aaPredicted RBP13.41□□□□□ -0.26
TNC-201ENST00000341037 CHMP4BP1P59074 171 aa13.41□□□□□ -0.26
TNC-201ENST00000341037 MYD88Q99836 296 aa13.41□□□□□ -0.26
TNC-201ENST00000341037 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
TNC-201ENST00000341037 SEPT7Q16181 437 aaKnown RBP13.41□□□□□ -0.26
TNC-201ENST00000341037 NUDT16Q96DE0 195 aaKnown RBP13.41□□□□□ -0.26
TNC-201ENST00000341037 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
TNC-201ENST00000341037 THUMPD2Q9BTF0 503 aaKnown RBP13.41□□□□□ -0.26
TNC-201ENST00000341037 DAPK1P53355 1430 aa13.4□□□□□ -0.26
TNC-201ENST00000341037 STARD3NLO95772 234 aa13.4□□□□□ -0.26
TNC-201ENST00000341037 FAM193AP78312 1265 aa13.4□□□□□ -0.26
TNC-201ENST00000341037 DHX37Q8IY37 1157 aaKnown RBP13.4□□□□□ -0.26
TNC-201ENST00000341037 IMMTQ16891 758 aaKnown RBP13.4□□□□□ -0.26
TNC-201ENST00000341037 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
TNC-201ENST00000341037 WAPLQ7Z5K2 1190 aa13.4□□□□□ -0.26
TNC-201ENST00000341037 TMEM57Q8N5G2 664 aa13.4□□□□□ -0.26
TNC-201ENST00000341037 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
TNC-201ENST00000341037 CTNNA3Q9UI47 895 aa13.4□□□□□ -0.26
TNC-201ENST00000341037 ENOX2Q16206 610 aaKnown RBP13.4□□□□□ -0.26
TNC-201ENST00000341037 CENPHQ9H3R5 247 aa13.4□□□□□ -0.26
TNC-201ENST00000341037 ANKRD30BQ9BXX2 1392 aa13.4□□□□□ -0.26
TNC-201ENST00000341037 TSPYL1Q9H0U9 437 aa13.4□□□□□ -0.27
TNC-201ENST00000341037 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
TNC-201ENST00000341037 EXOC6BQ9Y2D4 811 aa13.39□□□□□ -0.27
TNC-201ENST00000341037 SLC52A1Q9NWF4 448 aa13.39□□□□□ -0.27
TNC-201ENST00000341037 GOLGA6L10A6NI86 522 aa13.39□□□□□ -0.27
TNC-201ENST00000341037 CBFA2T2O43439 604 aa13.39□□□□□ -0.27
TNC-201ENST00000341037 ZPR1O75312 459 aa13.39□□□□□ -0.27
TNC-201ENST00000341037 CT47B1P0C2W7 299 aaPredicted RBP13.39□□□□□ -0.27
TNC-201ENST00000341037 BRPF3Q9ULD4 1205 aa13.39□□□□□ -0.27
TNC-201ENST00000341037 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
TNC-201ENST00000341037 POLR3DP05423 398 aaPredicted RBP13.39□□□□□ -0.27
TNC-201ENST00000341037 CWC15Q9P013 229 aaKnown RBP13.39□□□□□ -0.27
TNC-201ENST00000341037 ANKIB1Q9P2G1 1089 aa13.39□□□□□ -0.27
TNC-201ENST00000341037 MINDY4BA8MYZ0 360 aa13.39□□□□□ -0.27
TNC-201ENST00000341037 ATAD2Q6PL18 1390 aa13.38□□□□□ -0.27
TNC-201ENST00000341037 SSR1P43307 286 aaKnown RBP13.38□□□□□ -0.27
TNC-201ENST00000341037 CAMK4Q16566 473 aa13.38□□□□□ -0.27
TNC-201ENST00000341037 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
TNC-201ENST00000341037 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
TNC-201ENST00000341037 LUC7LQ9NQ29 371 aaKnown RBP13.38□□□□□ -0.27
TNC-201ENST00000341037 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
TNC-201ENST00000341037 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
TNC-201ENST00000341037 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
TNC-201ENST00000341037 CDK13Q14004 1512 aaKnown RBP13.38□□□□□ -0.27
TNC-201ENST00000341037 ADAMTS2O95450 1211 aa13.37□□□□□ -0.27
TNC-201ENST00000341037 PLCD4Q9BRC7 762 aa13.37□□□□□ -0.27
TNC-201ENST00000341037 NEBLO76041 1014 aa13.37□□□□□ -0.27
TNC-201ENST00000341037 TMPOP42166 694 aaKnown RBP13.37□□□□□ -0.27
TNC-201ENST00000341037 TMOD2Q9NZR1 351 aa13.37□□□□□ -0.27
TNC-201ENST00000341037 CRACR2BQ8N4Y2 399 aaPredicted RBP13.37□□□□□ -0.27
TNC-201ENST00000341037 FCHSD2O94868 740 aa13.37□□□□□ -0.27
TNC-201ENST00000341037 LEKR1Q6ZMV7 388 aa13.37□□□□□ -0.27
TNC-201ENST00000341037 TAX1BP1Q86VP1 789 aa13.37□□□□□ -0.27
TNC-201ENST00000341037 NUP62CLQ9H1M0 184 aa13.37□□□□□ -0.27
TNC-201ENST00000341037 SEC63Q9UGP8 760 aaKnown RBP13.37□□□□□ -0.27
TNC-201ENST00000341037 WASF1Q92558 559 aa13.37□□□□□ -0.27
TNC-201ENST00000341037 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
TNC-201ENST00000341037 DHX8Q14562 1220 aaKnown RBP13.36□□□□□ -0.27
TNC-201ENST00000341037 CAVIN4Q5BKX8 364 aa13.36□□□□□ -0.27
TNC-201ENST00000341037 CCDC83Q8IWF9 413 aa13.36□□□□□ -0.27
TNC-201ENST00000341037 CFAP45Q9UL16 551 aa13.36□□□□□ -0.27
TNC-201ENST00000341037 MPRIPQ6WCQ1 1025 aa13.36□□□□□ -0.27
TNC-201ENST00000341037 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
TNC-201ENST00000341037 ZNF652Q9Y2D9 606 aa13.36□□□□□ -0.27
TNC-201ENST00000341037 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
TNC-201ENST00000341037 TROQ12816 1431 aaPredicted RBP13.35□□□□□ -0.27
TNC-201ENST00000341037 KRT32Q14532 448 aa13.35□□□□□ -0.27
TNC-201ENST00000341037 CCDC184Q52MB2 194 aa13.35□□□□□ -0.27
TNC-201ENST00000341037 KIAA1328Q86T90 577 aa13.35□□□□□ -0.27
TNC-201ENST00000341037 UPF3BQ9BZI7 483 aaKnown RBP13.35□□□□□ -0.27
TNC-201ENST00000341037 MKNK2Q9HBH9 465 aa13.35□□□□□ -0.27
TNC-201ENST00000341037 RPGRIP1LQ68CZ1 1315 aa13.35□□□□□ -0.27
TNC-201ENST00000341037 EIF5P55010 431 aaKnown RBP13.35□□□□□ -0.27
TNC-201ENST00000341037 SCLT1Q96NL6 688 aa13.35□□□□□ -0.27
TNC-201ENST00000341037 ZRSR2Q15696 482 aaKnown RBP13.34□□□□□ -0.27
TNC-201ENST00000341037 TXLNBQ8N3L3 684 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms