RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 GNAI3P08754 354 aa11.46□□□□□ -0.58
TRERF1-201ENST00000340840 INO80Q9ULG1 1556 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-201ENST00000340840 USP26Q9BXU7 913 aa11.45□□□□□ -0.58
TRERF1-201ENST00000340840 CCDC61Q9Y6R9 512 aa11.45□□□□□ -0.58
TRERF1-201ENST00000340840 VWDEQ8N2E2 1590 aa11.45□□□□□ -0.58
TRERF1-201ENST00000340840 FKBP5Q13451 457 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-201ENST00000340840 HS1BP3Q53T59 392 aa11.45□□□□□ -0.58
TRERF1-201ENST00000340840 TSPY26PQ9H489 355 aa11.45□□□□□ -0.58
TRERF1-201ENST00000340840 PTPRCP08575 1304 aa11.45□□□□□ -0.58
TRERF1-201ENST00000340840 VIRMAQ69YN4 1812 aaKnown RBP11.45□□□□□ -0.58
TRERF1-201ENST00000340840 ATP6V1DQ9Y5K8 247 aa11.45□□□□□ -0.58
TRERF1-201ENST00000340840 LMTK2Q8IWU2 1503 aa11.44□□□□□ -0.58
TRERF1-201ENST00000340840 FAM83GA6ND36 823 aa11.44□□□□□ -0.58
TRERF1-201ENST00000340840 CHAF1AQ13111 956 aaPredicted RBP11.44□□□□□ -0.58
TRERF1-201ENST00000340840 SYCE3A1L190 88 aa11.44□□□□□ -0.58
TRERF1-201ENST00000340840 CD2BP2O95400 341 aaKnown RBP11.44□□□□□ -0.58
TRERF1-201ENST00000340840 ZNF445P59923 1031 aa11.44□□□□□ -0.58
TRERF1-201ENST00000340840 MTERF4Q7Z6M4 381 aaKnown RBP11.44□□□□□ -0.58
TRERF1-201ENST00000340840 C16orf71Q8IYS4 520 aaPredicted RBP11.44□□□□□ -0.58
TRERF1-201ENST00000340840 PDCL3Q9H2J4 239 aa11.44□□□□□ -0.58
TRERF1-201ENST00000340840 PPP1R9BQ96SB3 815 aa11.44□□□□□ -0.58
TRERF1-201ENST00000340840 KCNJ4P48050 445 aa11.43□□□□□ -0.58
TRERF1-201ENST00000340840 NGDNQ8NEJ9 315 aaKnown RBP11.43□□□□□ -0.58
TRERF1-201ENST00000340840 NUDT16Q96DE0 195 aaKnown RBP11.43□□□□□ -0.58
TRERF1-201ENST00000340840 LRRCC1Q9C099 1032 aa11.43□□□□□ -0.58
TRERF1-201ENST00000340840 AMPHP49418 695 aa11.43□□□□□ -0.58
TRERF1-201ENST00000340840 KIF24Q5T7B8 1368 aa11.43□□□□□ -0.58
TRERF1-201ENST00000340840 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
TRERF1-201ENST00000340840 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
TRERF1-201ENST00000340840 WASLO00401 505 aaPredicted RBP11.43□□□□□ -0.58
TRERF1-201ENST00000340840 OFD1O75665 1012 aa11.43□□□□□ -0.58
TRERF1-201ENST00000340840 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
TRERF1-201ENST00000340840 MCM5P33992 734 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 CHMP4AQ9BY43 222 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 IBTKQ9P2D0 1353 aaPredicted RBP11.42□□□□□ -0.58
TRERF1-201ENST00000340840 GLI2P10070 1586 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 GSPT1P15170 499 aaKnown RBP11.42□□□□□ -0.58
TRERF1-201ENST00000340840 CEP85Q6P2H3 762 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 NCOA3Q9Y6Q9 1424 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 PPRC1Q5VV67 1664 aaKnown RBP11.42□□□□□ -0.58
TRERF1-201ENST00000340840 MYO3AQ8NEV4 1616 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 NCKAP5LQ9HCH0 1330 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 IL13P35225 146 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 PKNOX2Q96KN3 472 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 WDR33Q9C0J8 1336 aaKnown RBP11.42□□□□□ -0.58
TRERF1-201ENST00000340840 TULP4Q9NRJ4 1543 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 MCM10Q7L590 875 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 MEIS3Q99687 375 aa11.42□□□□□ -0.58
TRERF1-201ENST00000340840 PTCH1Q13635 1447 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 GOLGA6L4A6NEF3 574 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 DDIT3P35638 169 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 RBM10P98175 930 aaKnown RBP11.41□□□□□ -0.58
TRERF1-201ENST00000340840 LRSAM1Q6UWE0 723 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 SRCIN1Q9C0H9 1055 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 RBM27Q9P2N5 1060 aaKnown RBP11.41□□□□□ -0.58
TRERF1-201ENST00000340840 SIRT2Q8IXJ6 389 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 ARID3AQ99856 593 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 EXOC6BQ9Y2D4 811 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 ADGRB1O14514 1584 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 MLH3Q9UHC1 1453 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
TRERF1-201ENST00000340840 ZGPATQ8N5A5 531 aaKnown RBP11.41□□□□□ -0.58
TRERF1-201ENST00000340840 LMBRD1Q9NUN5 540 aa11.41□□□□□ -0.58
TRERF1-201ENST00000340840 UQCRHLA0A096LP55 91 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 TOM1O60784 492 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 UQCRHP07919 91 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 KIF2CQ99661 725 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 XPCQ01831 940 aaPredicted RBP11.4□□□□□ -0.58
TRERF1-201ENST00000340840 CCDC30Q5VVM6 783 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 TMX3Q96JJ7 454 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 RIMS2Q9UQ26 1411 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 USP32Q8NFA0 1604 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 SHPRHQ149N8 1683 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 MX1P20591 662 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 FAM184AQ8NB25 1140 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 FAM135BQ49AJ0 1406 aa11.4□□□□□ -0.58
TRERF1-201ENST00000340840 MED14O60244 1454 aa11.4□□□□□ -0.59
TRERF1-201ENST00000340840 GOLGA6L6A8MZA4 724 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 UBTFL1P0CB47 393 aaPredicted RBP11.39□□□□□ -0.59
TRERF1-201ENST00000340840 PDE1AP54750 535 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 PNPLA6Q8IY17 1366 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 OTUD7AQ8TE49 926 aaPredicted RBP11.39□□□□□ -0.59
TRERF1-201ENST00000340840 SMC3Q9UQE7 1217 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 ERBB4Q15303 1308 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 LETM1O95202 739 aaPredicted RBP11.39□□□□□ -0.59
TRERF1-201ENST00000340840 ZNF853P0CG23 659 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 CLEC17AQ6ZS10 378 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 RBSNQ9H1K0 784 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 ZKSCAN5Q9Y2L8 839 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 ABCC3O15438 1527 aa11.39□□□□□ -0.59
TRERF1-201ENST00000340840 GPATCH3Q96I76 525 aa11.38□□□□□ -0.59
TRERF1-201ENST00000340840 ADGRB2O60241 1585 aa11.38□□□□□ -0.59
TRERF1-201ENST00000340840 RUFY2Q8WXA3 655 aa11.38□□□□□ -0.59
TRERF1-201ENST00000340840 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.38□□□□□ -0.59
TRERF1-201ENST00000340840 ABCA9Q8IUA7 1624 aa11.38□□□□□ -0.59
TRERF1-201ENST00000340840 NOL7Q9UMY1 257 aaKnown RBP11.38□□□□□ -0.59
TRERF1-201ENST00000340840 PIK3R4Q99570 1358 aa11.38□□□□□ -0.59
TRERF1-201ENST00000340840 EDC4Q6P2E9 1401 aaKnown RBP11.38□□□□□ -0.59
TRERF1-201ENST00000340840 F6X3S4 739 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms