RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 TATP17735 454 aaPredicted RBP17.51■□□□□ 0.39
GTF2F2-201ENST00000340473 PDE3BQ13370 1112 aa17.5■□□□□ 0.39
GTF2F2-201ENST00000340473 PLEKHO1Q53GL0 409 aaPredicted RBP17.5■□□□□ 0.39
GTF2F2-201ENST00000340473 UNC5CLQ8IV45 518 aa17.5■□□□□ 0.39
GTF2F2-201ENST00000340473 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
GTF2F2-201ENST00000340473 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
GTF2F2-201ENST00000340473 AMOTQ4VCS5 1084 aa17.49■□□□□ 0.39
GTF2F2-201ENST00000340473 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
GTF2F2-201ENST00000340473 OVOS2A0A0G2JMS6 1433 aa17.49■□□□□ 0.39
GTF2F2-201ENST00000340473 THUMPD2Q9BTF0 503 aaKnown RBP17.49■□□□□ 0.39
GTF2F2-201ENST00000340473 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
GTF2F2-201ENST00000340473 IL2RBP14784 551 aa17.48■□□□□ 0.39
GTF2F2-201ENST00000340473 LMOD3Q0VAK6 560 aa17.48■□□□□ 0.39
GTF2F2-201ENST00000340473 DCTN1Q14203 1278 aa17.48■□□□□ 0.39
GTF2F2-201ENST00000340473 WDR63Q8IWG1 891 aa17.48■□□□□ 0.39
GTF2F2-201ENST00000340473 SPATA31A1Q5TZJ5 1347 aa17.48■□□□□ 0.39
GTF2F2-201ENST00000340473 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
GTF2F2-201ENST00000340473 PLEKHG2Q9H7P9 1386 aa17.48■□□□□ 0.39
GTF2F2-201ENST00000340473 USP21Q9UK80 565 aa17.47■□□□□ 0.39
GTF2F2-201ENST00000340473 MAP3K5Q99683 1374 aa17.47■□□□□ 0.39
GTF2F2-201ENST00000340473 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
GTF2F2-201ENST00000340473 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
GTF2F2-201ENST00000340473 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
GTF2F2-201ENST00000340473 MCM10Q7L590 875 aa17.47■□□□□ 0.39
GTF2F2-201ENST00000340473 AFF2P51816 1311 aa17.46■□□□□ 0.39
GTF2F2-201ENST00000340473 DISP2A7MBM2 1401 aa17.46■□□□□ 0.39
GTF2F2-201ENST00000340473 GNAT3A8MTJ3 354 aa17.46■□□□□ 0.39
GTF2F2-201ENST00000340473 SLFN5Q08AF3 891 aa17.46■□□□□ 0.39
GTF2F2-201ENST00000340473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.46■□□□□ 0.395e-9■■■□□ 14.8
GTF2F2-201ENST00000340473 WNK3Q9BYP7 1800 aa17.46■□□□□ 0.39
GTF2F2-201ENST00000340473 SPG7Q9UQ90 795 aa17.45■□□□□ 0.38
GTF2F2-201ENST00000340473 VPS72Q15906 364 aa17.45■□□□□ 0.38
GTF2F2-201ENST00000340473 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
GTF2F2-201ENST00000340473 CCDC9Q9Y3X0 531 aaKnown RBP17.45■□□□□ 0.38
GTF2F2-201ENST00000340473 E9PSI1 815 aa17.44■□□□□ 0.38
GTF2F2-201ENST00000340473 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
GTF2F2-201ENST00000340473 RTF1Q92541 710 aaKnown RBP17.44■□□□□ 0.38
GTF2F2-201ENST00000340473 SHANK3Q9BYB0 1731 aa17.43■□□□□ 0.38
GTF2F2-201ENST00000340473 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
GTF2F2-201ENST00000340473 DUSP27Q5VZP5 1158 aa17.43■□□□□ 0.38
GTF2F2-201ENST00000340473 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
GTF2F2-201ENST00000340473 ZCRB1Q8TBF4 217 aaKnown RBP17.43■□□□□ 0.38
GTF2F2-201ENST00000340473 THRAP3Q9Y2W1 955 aaKnown RBP17.43■□□□□ 0.38
GTF2F2-201ENST00000340473 IL17REQ8NFR9 667 aa17.43■□□□□ 0.38
GTF2F2-201ENST00000340473 IL16Q14005 1332 aa17.42■□□□□ 0.38
GTF2F2-201ENST00000340473 LRRC37A3O60309 1634 aa17.42■□□□□ 0.38
GTF2F2-201ENST00000340473 CYP27B1O15528 508 aa17.42■□□□□ 0.38
GTF2F2-201ENST00000340473 PHKG2P15735 406 aa17.42■□□□□ 0.38
GTF2F2-201ENST00000340473 MPRIPQ6WCQ1 1025 aa17.41■□□□□ 0.38
GTF2F2-201ENST00000340473 LGR6Q9HBX8 967 aa17.41■□□□□ 0.38
GTF2F2-201ENST00000340473 CALD1Q05682 793 aaKnown RBP17.4■□□□□ 0.38
GTF2F2-201ENST00000340473 BARGINQ6ZT62 677 aa17.4■□□□□ 0.38
GTF2F2-201ENST00000340473 IFNL2Q8IZJ0 200 aa17.4■□□□□ 0.38
GTF2F2-201ENST00000340473 PCDH11XQ9BZA7 1347 aa17.4■□□□□ 0.38
GTF2F2-201ENST00000340473 PCDH11YQ9BZA8 1340 aa17.4■□□□□ 0.38
GTF2F2-201ENST00000340473 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
GTF2F2-201ENST00000340473 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
GTF2F2-201ENST00000340473 TSR2Q969E8 191 aaKnown RBP17.4■□□□□ 0.38
GTF2F2-201ENST00000340473 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
GTF2F2-201ENST00000340473 ATRNO75882 1429 aa17.39■□□□□ 0.37
GTF2F2-201ENST00000340473 ADAMTS7Q9UKP4 1686 aa17.39■□□□□ 0.37
GTF2F2-201ENST00000340473 KDM6AO15550 1401 aaPredicted RBP17.39■□□□□ 0.37
GTF2F2-201ENST00000340473 FANCIQ9NVI1 1328 aa17.39■□□□□ 0.37
GTF2F2-201ENST00000340473 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
GTF2F2-201ENST00000340473 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
GTF2F2-201ENST00000340473 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
GTF2F2-201ENST00000340473 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
GTF2F2-201ENST00000340473 MYH16Q9H6N6 1097 aa17.39■□□□□ 0.37
GTF2F2-201ENST00000340473 IFT57Q9NWB7 429 aa17.39■□□□□ 0.37
GTF2F2-201ENST00000340473 CFAP44Q96MT7 982 aa17.38■□□□□ 0.37
GTF2F2-201ENST00000340473 GLI3P10071 1580 aa17.38■□□□□ 0.37
GTF2F2-201ENST00000340473 GNAI1P63096 354 aa17.37■□□□□ 0.37
GTF2F2-201ENST00000340473 FAM98CQ17RN3 349 aaKnown RBP17.37■□□□□ 0.37
GTF2F2-201ENST00000340473 DDX54Q8TDD1 881 aaKnown RBP17.37■□□□□ 0.37
GTF2F2-201ENST00000340473 TNS2Q63HR2 1409 aa17.37■□□□□ 0.37
GTF2F2-201ENST00000340473 SCN11AQ9UI33 1791 aa17.37■□□□□ 0.37
GTF2F2-201ENST00000340473 TRPC5Q9UL62 973 aaPredicted RBP17.37■□□□□ 0.37
GTF2F2-201ENST00000340473 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
GTF2F2-201ENST00000340473 EXOC5O00471 708 aa17.36■□□□□ 0.37
GTF2F2-201ENST00000340473 GJD4Q96KN9 370 aaPredicted RBP17.36■□□□□ 0.37
GTF2F2-201ENST00000340473 CHL1O00533 1208 aa17.35■□□□□ 0.37
GTF2F2-201ENST00000340473 DCAF5Q96JK2 942 aa17.35■□□□□ 0.37
GTF2F2-201ENST00000340473 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
GTF2F2-201ENST00000340473 HSP90AB1P08238 724 aaKnown RBP17.35■□□□□ 0.37
GTF2F2-201ENST00000340473 DDB1Q16531 1140 aa17.35■□□□□ 0.37
GTF2F2-201ENST00000340473 QTRT2Q9H974 415 aaKnown RBP17.35■□□□□ 0.37
GTF2F2-201ENST00000340473 NKX1-1Q15270 411 aaPredicted RBP17.34■□□□□ 0.37
GTF2F2-201ENST00000340473 THSD7AQ9UPZ6 1657 aa17.33■□□□□ 0.37
GTF2F2-201ENST00000340473 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.36
GTF2F2-201ENST00000340473 TAF7Q15545 349 aaPredicted RBP17.33■□□□□ 0.36
GTF2F2-201ENST00000340473 EXOSC9Q06265 439 aaKnown RBP17.32■□□□□ 0.36
GTF2F2-201ENST00000340473 TEFQ10587 303 aa17.32■□□□□ 0.36
GTF2F2-201ENST00000340473 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
GTF2F2-201ENST00000340473 MRC1P22897 1456 aa17.32■□□□□ 0.36
GTF2F2-201ENST00000340473 TOGARAM1Q9Y4F4 1720 aa17.31■□□□□ 0.36
GTF2F2-201ENST00000340473 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
GTF2F2-201ENST00000340473 ZNF772Q68DY9 489 aaPredicted RBP17.3■□□□□ 0.36
GTF2F2-201ENST00000340473 A0A0G2JS52 829 aa17.29■□□□□ 0.36
GTF2F2-201ENST00000340473 MYT1Q01538 1121 aa17.29■□□□□ 0.36
GTF2F2-201ENST00000340473 MARCH10Q8NA82 808 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms