RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 KIF7Q2M1P5 1343 aa18.29■□□□□ 0.52
SIRPB3P-201ENST00000340424 WASHC2AQ641Q2 1341 aa18.29■□□□□ 0.52
SIRPB3P-201ENST00000340424 ATXN8OSP0DMR3 200 aa18.29■□□□□ 0.52
SIRPB3P-201ENST00000340424 EMILIN1Q9Y6C2 1016 aa18.29■□□□□ 0.52
SIRPB3P-201ENST00000340424 RGPD2P0DJD1 1756 aa18.29■□□□□ 0.52
SIRPB3P-201ENST00000340424 NUP188Q5SRE5 1749 aa18.29■□□□□ 0.52
SIRPB3P-201ENST00000340424 MAP2P11137 1827 aaKnown RBP18.28■□□□□ 0.52
SIRPB3P-201ENST00000340424 NBPF14Q5TI25 921 aa18.28■□□□□ 0.52
SIRPB3P-201ENST00000340424 NBPF6Q5VWK0 638 aa18.28■□□□□ 0.52
SIRPB3P-201ENST00000340424 NBPF4Q96M43 638 aa18.28■□□□□ 0.52
SIRPB3P-201ENST00000340424 KNSTRNQ9Y448 316 aa18.28■□□□□ 0.52
SIRPB3P-201ENST00000340424 SAMD1Q6SPF0 538 aaPredicted RBP18.27■□□□□ 0.52
SIRPB3P-201ENST00000340424 RAPGEF4Q8WZA2 1011 aa18.27■□□□□ 0.52
SIRPB3P-201ENST00000340424 MEGF6O75095 1541 aa18.27■□□□□ 0.51
SIRPB3P-201ENST00000340424 PPM1GO15355 546 aaPredicted RBP18.26■□□□□ 0.51
SIRPB3P-201ENST00000340424 ZCRB1Q8TBF4 217 aaKnown RBP18.26■□□□□ 0.51
SIRPB3P-201ENST00000340424 POLKQ9UBT6 870 aa18.26■□□□□ 0.51
SIRPB3P-201ENST00000340424 NCAPD2Q15021 1401 aa18.25■□□□□ 0.51
SIRPB3P-201ENST00000340424 LRP5O75197 1615 aa18.25■□□□□ 0.51
SIRPB3P-201ENST00000340424 TATP17735 454 aaPredicted RBP18.24■□□□□ 0.51
SIRPB3P-201ENST00000340424 DDX54Q8TDD1 881 aaKnown RBP18.24■□□□□ 0.51
SIRPB3P-201ENST00000340424 SHANK3Q9BYB0 1731 aa18.23■□□□□ 0.51
SIRPB3P-201ENST00000340424 PLEKHG2Q9H7P9 1386 aa18.23■□□□□ 0.51
SIRPB3P-201ENST00000340424 PSDA5PKW4 1024 aaPredicted RBP18.23■□□□□ 0.51
SIRPB3P-201ENST00000340424 R3HDM1Q15032 1099 aaKnown RBP18.23■□□□□ 0.51
SIRPB3P-201ENST00000340424 PTF1AQ7RTS3 328 aa18.22■□□□□ 0.51
SIRPB3P-201ENST00000340424 MORC1Q86VD1 984 aa18.22■□□□□ 0.51
SIRPB3P-201ENST00000340424 USHBP1Q8N6Y0 703 aa18.22■□□□□ 0.51
SIRPB3P-201ENST00000340424 PCDH11XQ9BZA7 1347 aa18.22■□□□□ 0.51
SIRPB3P-201ENST00000340424 PCDH11YQ9BZA8 1340 aa18.22■□□□□ 0.51
SIRPB3P-201ENST00000340424 KCNQ2O43526 872 aa18.21■□□□□ 0.51
SIRPB3P-201ENST00000340424 TNNT2P45379 298 aaPredicted RBP18.21■□□□□ 0.51
SIRPB3P-201ENST00000340424 ACSBG1Q96GR2 724 aa18.21■□□□□ 0.51
SIRPB3P-201ENST00000340424 AMER1Q5JTC6 1135 aaPredicted RBP18.2■□□□□ 0.5
SIRPB3P-201ENST00000340424 BTAF1O14981 1849 aa18.2■□□□□ 0.5
SIRPB3P-201ENST00000340424 TXNRD1Q16881 649 aa18.19■□□□□ 0.5
SIRPB3P-201ENST00000340424 PKD1L3Q7Z443 1732 aa18.19■□□□□ 0.5
SIRPB3P-201ENST00000340424 RNF39Q9H2S5 420 aa18.19■□□□□ 0.5
SIRPB3P-201ENST00000340424 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
SIRPB3P-201ENST00000340424 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
SIRPB3P-201ENST00000340424 EIF4A2Q14240 407 aaKnown RBP18.17■□□□□ 0.5
SIRPB3P-201ENST00000340424 PROM2Q8N271 834 aa18.17■□□□□ 0.5
SIRPB3P-201ENST00000340424 EYA1Q99502 592 aa18.17■□□□□ 0.5
SIRPB3P-201ENST00000340424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.17■□□□□ 0.5
SIRPB3P-201ENST00000340424 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
SIRPB3P-201ENST00000340424 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
SIRPB3P-201ENST00000340424 KAT6BQ8WYB5 2073 aa18.15■□□□□ 0.5
SIRPB3P-201ENST00000340424 PRIM1P49642 420 aaKnown RBP18.14■□□□□ 0.49
SIRPB3P-201ENST00000340424 SLC27A3Q5K4L6 730 aa18.14■□□□□ 0.49
SIRPB3P-201ENST00000340424 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
SIRPB3P-201ENST00000340424 HMGB2P26583 209 aaKnown RBP18.13■□□□□ 0.49
SIRPB3P-201ENST00000340424 SYTL4Q96C24 671 aaPredicted RBP18.13■□□□□ 0.49
SIRPB3P-201ENST00000340424 STK32BQ9NY57 414 aa18.13■□□□□ 0.49
SIRPB3P-201ENST00000340424 ANO8Q9HCE9 1232 aaPredicted RBP18.12■□□□□ 0.49
SIRPB3P-201ENST00000340424 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
SIRPB3P-201ENST00000340424 CYP27B1O15528 508 aa18.11■□□□□ 0.49
SIRPB3P-201ENST00000340424 NKX1-1Q15270 411 aaPredicted RBP18.11■□□□□ 0.49
SIRPB3P-201ENST00000340424 LY75O60449 1722 aa18.1■□□□□ 0.49
SIRPB3P-201ENST00000340424 SLC15A2Q16348 729 aa18.1■□□□□ 0.49
SIRPB3P-201ENST00000340424 CASZ1Q86V15 1759 aa18.09■□□□□ 0.49
SIRPB3P-201ENST00000340424 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.48
SIRPB3P-201ENST00000340424 IFNL2Q8IZJ0 200 aa18.08■□□□□ 0.48
SIRPB3P-201ENST00000340424 KDRP35968 1356 aa18.07■□□□□ 0.48
SIRPB3P-201ENST00000340424 AMOTQ4VCS5 1084 aa18.07■□□□□ 0.48
SIRPB3P-201ENST00000340424 SPON1Q9HCB6 807 aa18.07■□□□□ 0.48
SIRPB3P-201ENST00000340424 TOGARAM1Q9Y4F4 1720 aa18.06■□□□□ 0.48
SIRPB3P-201ENST00000340424 HSP90AB1P08238 724 aaKnown RBP18.06■□□□□ 0.48
SIRPB3P-201ENST00000340424 PHKG2P15735 406 aa18.06■□□□□ 0.48
SIRPB3P-201ENST00000340424 IL13P35225 146 aa18.06■□□□□ 0.48
SIRPB3P-201ENST00000340424 MTHFSP49914 203 aa18.06■□□□□ 0.48
SIRPB3P-201ENST00000340424 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
SIRPB3P-201ENST00000340424 PLEKHO1Q53GL0 409 aaPredicted RBP18.05■□□□□ 0.48
SIRPB3P-201ENST00000340424 SMARCC1Q92922 1105 aaPredicted RBP18.05■□□□□ 0.48
SIRPB3P-201ENST00000340424 LRRC4BQ9NT99 713 aa18.05■□□□□ 0.48
SIRPB3P-201ENST00000340424 QSER1Q2KHR3 1735 aa18.04■□□□□ 0.48
SIRPB3P-201ENST00000340424 CCNL1Q9UK58 526 aaPredicted RBP18.04■□□□□ 0.48
SIRPB3P-201ENST00000340424 ITGB4P16144 1822 aa18.04■□□□□ 0.48
SIRPB3P-201ENST00000340424 MPRIPQ6WCQ1 1025 aa18.03■□□□□ 0.48
SIRPB3P-201ENST00000340424 PALLDQ8WX93 1383 aa18.03■□□□□ 0.48
SIRPB3P-201ENST00000340424 SULT6B1Q6IMI4 303 aa18.02■□□□□ 0.48
SIRPB3P-201ENST00000340424 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
SIRPB3P-201ENST00000340424 DIAPH1O60610 1272 aaKnown RBP18.01■□□□□ 0.47
SIRPB3P-201ENST00000340424 DCAF5Q96JK2 942 aa18.01■□□□□ 0.47
SIRPB3P-201ENST00000340424 MTFR1LQ9H019 292 aa18.01■□□□□ 0.47
SIRPB3P-201ENST00000340424 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
SIRPB3P-201ENST00000340424 ERVV-2B6SEH9 535 aa18■□□□□ 0.47
SIRPB3P-201ENST00000340424 ZNF827Q17R98 1081 aa18■□□□□ 0.47
SIRPB3P-201ENST00000340424 AEBP1Q8IUX7 1158 aa18■□□□□ 0.47
SIRPB3P-201ENST00000340424 PIGBQ92521 554 aa18■□□□□ 0.47
SIRPB3P-201ENST00000340424 C1orf141Q5JVX7 400 aa17.99■□□□□ 0.47
SIRPB3P-201ENST00000340424 ZNF530Q6P9A1 599 aaPredicted RBP17.99■□□□□ 0.47
SIRPB3P-201ENST00000340424 PPP1R1BQ9UD71 204 aaPredicted RBP17.99■□□□□ 0.47
SIRPB3P-201ENST00000340424 C5P01031 1676 aa17.99■□□□□ 0.47
SIRPB3P-201ENST00000340424 SLC16A10Q8TF71 515 aa17.98■□□□□ 0.47
SIRPB3P-201ENST00000340424 TFCP2L1Q9NZI6 479 aa17.98■□□□□ 0.47
SIRPB3P-201ENST00000340424 COL3A1P02461 1466 aaPredicted RBP17.98■□□□□ 0.47
SIRPB3P-201ENST00000340424 ZBTB7AO95365 584 aa17.97■□□□□ 0.47
SIRPB3P-201ENST00000340424 CFAP53Q96M91 514 aa17.97■□□□□ 0.47
SIRPB3P-201ENST00000340424 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
SIRPB3P-201ENST00000340424 KDM6AO15550 1401 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms