RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 KAT6BQ8WYB5 2073 aa19.99■□□□□ 0.79
ERCC1-203ENST00000340192 PLSCR1O15162 318 aa19.99■□□□□ 0.79
ERCC1-203ENST00000340192 KCNQ2O43526 872 aa19.99■□□□□ 0.79
ERCC1-203ENST00000340192 AMER1Q5JTC6 1135 aaPredicted RBP19.99■□□□□ 0.79
ERCC1-203ENST00000340192 ZCRB1Q8TBF4 217 aaKnown RBP19.99■□□□□ 0.79
ERCC1-203ENST00000340192 RAPGEF4Q8WZA2 1011 aa19.99■□□□□ 0.79
ERCC1-203ENST00000340192 BTAF1O14981 1849 aa19.98■□□□□ 0.79
ERCC1-203ENST00000340192 PSDA5PKW4 1024 aaPredicted RBP19.98■□□□□ 0.79
ERCC1-203ENST00000340192 DOT1LQ8TEK3 1739 aa19.97■□□□□ 0.79
ERCC1-203ENST00000340192 NCAPD2Q15021 1401 aa19.97■□□□□ 0.79
ERCC1-203ENST00000340192 PER1O15534 1290 aaPredicted RBP19.97■□□□□ 0.79
ERCC1-203ENST00000340192 TATP17735 454 aaPredicted RBP19.97■□□□□ 0.79
ERCC1-203ENST00000340192 PKD1L3Q7Z443 1732 aa19.96■□□□□ 0.79
ERCC1-203ENST00000340192 EIF4A2Q14240 407 aaKnown RBP19.95■□□□□ 0.78
ERCC1-203ENST00000340192 R3HDM1Q15032 1099 aaKnown RBP19.95■□□□□ 0.78
ERCC1-203ENST00000340192 EYA1Q99502 592 aa19.95■□□□□ 0.78
ERCC1-203ENST00000340192 NBPF14Q5TI25 921 aa19.92■□□□□ 0.78
ERCC1-203ENST00000340192 PROM2Q8N271 834 aa19.92■□□□□ 0.78
ERCC1-203ENST00000340192 CC2D1BQ5T0F9 858 aaKnown RBP19.91■□□□□ 0.78
ERCC1-203ENST00000340192 PCDH11XQ9BZA7 1347 aa19.91■□□□□ 0.78
ERCC1-203ENST00000340192 PCDH11YQ9BZA8 1340 aa19.91■□□□□ 0.78
ERCC1-203ENST00000340192 LRP5O75197 1615 aa19.89■□□□□ 0.77
ERCC1-203ENST00000340192 TXNRD1Q16881 649 aa19.89■□□□□ 0.77
ERCC1-203ENST00000340192 SYTL4Q96C24 671 aaPredicted RBP19.89■□□□□ 0.77
ERCC1-203ENST00000340192 NPC1L1Q9UHC9 1359 aa19.88■□□□□ 0.77
ERCC1-203ENST00000340192 IGSF1Q8N6C5 1336 aa19.88■□□□□ 0.77
ERCC1-203ENST00000340192 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
ERCC1-203ENST00000340192 CYP27B1O15528 508 aa19.87■□□□□ 0.77
ERCC1-203ENST00000340192 TOGARAM1Q9Y4F4 1720 aa19.87■□□□□ 0.77
ERCC1-203ENST00000340192 CNGB1Q14028 1251 aaPredicted RBP19.86■□□□□ 0.77
ERCC1-203ENST00000340192 SPG7Q9UQ90 795 aa19.86■□□□□ 0.77
ERCC1-203ENST00000340192 ITGB4P16144 1822 aa19.86■□□□□ 0.77
ERCC1-203ENST00000340192 ANO8Q9HCE9 1232 aaPredicted RBP19.85■□□□□ 0.77
ERCC1-203ENST00000340192 MTHFSP49914 203 aa19.84■□□□□ 0.77
ERCC1-203ENST00000340192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.84■□□□□ 0.77
ERCC1-203ENST00000340192 LY75O60449 1722 aa19.84■□□□□ 0.77
ERCC1-203ENST00000340192 PAPPAQ13219 1627 aa19.83■□□□□ 0.76
ERCC1-203ENST00000340192 PLEKHG2Q9H7P9 1386 aa19.83■□□□□ 0.76
ERCC1-203ENST00000340192 IL13P35225 146 aa19.82■□□□□ 0.76
ERCC1-203ENST00000340192 CASZ1Q86V15 1759 aa19.81■□□□□ 0.76
ERCC1-203ENST00000340192 NKX1-1Q15270 411 aaPredicted RBP19.8■□□□□ 0.76
ERCC1-203ENST00000340192 AEBP1Q8IUX7 1158 aa19.8■□□□□ 0.76
ERCC1-203ENST00000340192 LRRC4BQ9NT99 713 aa19.8■□□□□ 0.76
ERCC1-203ENST00000340192 STK32BQ9NY57 414 aa19.79■□□□□ 0.76
ERCC1-203ENST00000340192 PHKG2P15735 406 aa19.78■□□□□ 0.76
ERCC1-203ENST00000340192 SLC15A2Q16348 729 aa19.78■□□□□ 0.76
ERCC1-203ENST00000340192 SLC27A3Q5K4L6 730 aa19.78■□□□□ 0.76
ERCC1-203ENST00000340192 SULT6B1Q6IMI4 303 aa19.78■□□□□ 0.76
ERCC1-203ENST00000340192 MPRIPQ6WCQ1 1025 aa19.78■□□□□ 0.76
ERCC1-203ENST00000340192 IFNL2Q8IZJ0 200 aa19.78■□□□□ 0.76
ERCC1-203ENST00000340192 KDRP35968 1356 aa19.78■□□□□ 0.76
ERCC1-203ENST00000340192 COL3A1P02461 1466 aaPredicted RBP19.76■□□□□ 0.75
ERCC1-203ENST00000340192 PLEKHO1Q53GL0 409 aaPredicted RBP19.76■□□□□ 0.75
ERCC1-203ENST00000340192 DIAPH1O60610 1272 aaKnown RBP19.75■□□□□ 0.75
ERCC1-203ENST00000340192 KCNQ4P56696 695 aa19.75■□□□□ 0.75
ERCC1-203ENST00000340192 PDGFDQ9GZP0 370 aaPredicted RBP19.75■□□□□ 0.75
ERCC1-203ENST00000340192 ZNF827Q17R98 1081 aa19.74■□□□□ 0.75
ERCC1-203ENST00000340192 AMOTQ4VCS5 1084 aa19.74■□□□□ 0.75
ERCC1-203ENST00000340192 C5P01031 1676 aa19.73■□□□□ 0.75
ERCC1-203ENST00000340192 ZNF530Q6P9A1 599 aaPredicted RBP19.73■□□□□ 0.75
ERCC1-203ENST00000340192 PIGBQ92521 554 aa19.73■□□□□ 0.75
ERCC1-203ENST00000340192 CCNL1Q9UK58 526 aaPredicted RBP19.73■□□□□ 0.75
ERCC1-203ENST00000340192 TUBGCP6Q96RT7 1819 aa19.73■□□□□ 0.75
ERCC1-203ENST00000340192 QSER1Q2KHR3 1735 aa19.73■□□□□ 0.75
ERCC1-203ENST00000340192 PALLDQ8WX93 1383 aa19.72■□□□□ 0.75
ERCC1-203ENST00000340192 TAF1LQ8IZX4 1826 aa19.72■□□□□ 0.75
ERCC1-203ENST00000340192 HMOX1P09601 288 aa19.71■□□□□ 0.75
ERCC1-203ENST00000340192 AKT1S1Q96B36 256 aa19.71■□□□□ 0.75
ERCC1-203ENST00000340192 SPON1Q9HCB6 807 aa19.71■□□□□ 0.75
ERCC1-203ENST00000340192 TMOD3Q9NYL9 352 aa19.71■□□□□ 0.75
ERCC1-203ENST00000340192 HSP90AB1P08238 724 aaKnown RBP19.7■□□□□ 0.74
ERCC1-203ENST00000340192 DCAF5Q96JK2 942 aa19.7■□□□□ 0.74
ERCC1-203ENST00000340192 KDM6AO15550 1401 aaPredicted RBP19.69■□□□□ 0.74
ERCC1-203ENST00000340192 C1orf141Q5JVX7 400 aa19.69■□□□□ 0.74
ERCC1-203ENST00000340192 SMARCC1Q92922 1105 aaPredicted RBP19.69■□□□□ 0.74
ERCC1-203ENST00000340192 VIRMAQ69YN4 1812 aaKnown RBP19.69■□□□□ 0.74
ERCC1-203ENST00000340192 SCN11AQ9UI33 1791 aa19.68■□□□□ 0.74
ERCC1-203ENST00000340192 ZBTB7AO95365 584 aa19.68■□□□□ 0.74
ERCC1-203ENST00000340192 PPP2R1AP30153 589 aa19.68■□□□□ 0.74
ERCC1-203ENST00000340192 ERVV-2B6SEH9 535 aa19.67■□□□□ 0.74
ERCC1-203ENST00000340192 U2SURPO15042 1029 aaKnown RBP19.67■□□□□ 0.74
ERCC1-203ENST00000340192 CFAP53Q96M91 514 aa19.67■□□□□ 0.74
ERCC1-203ENST00000340192 ASAP1Q9ULH1 1129 aa19.67■□□□□ 0.74
ERCC1-203ENST00000340192 TFCP2L1Q9NZI6 479 aa19.66■□□□□ 0.74
ERCC1-203ENST00000340192 ATF5Q9Y2D1 282 aaPredicted RBP19.65■□□□□ 0.74
ERCC1-203ENST00000340192 C4BP0C0L5 1744 aa19.65■□□□□ 0.74
ERCC1-203ENST00000340192 AKAP4Q5JQC9 854 aa19.64■□□□□ 0.73
ERCC1-203ENST00000340192 ATG3Q9NT62 314 aa19.64■□□□□ 0.73
ERCC1-203ENST00000340192 PNPLA7Q6ZV29 1317 aa19.64■□□□□ 0.73
ERCC1-203ENST00000340192 CABP4P57796 275 aa19.63■□□□□ 0.73
ERCC1-203ENST00000340192 MTFR1LQ9H019 292 aa19.63■□□□□ 0.73
ERCC1-203ENST00000340192 PPP1R1BQ9UD71 204 aaPredicted RBP19.63■□□□□ 0.73
ERCC1-203ENST00000340192 LOC102724428A0A0B4J2F2 783 aa19.62■□□□□ 0.73
ERCC1-203ENST00000340192 PTGER2P43116 358 aa19.62■□□□□ 0.73
ERCC1-203ENST00000340192 SIK1P57059 783 aa19.62■□□□□ 0.73
ERCC1-203ENST00000340192 MTHFSDQ2M296 383 aaKnown RBP19.62■□□□□ 0.73
ERCC1-203ENST00000340192 HMGB2P26583 209 aaKnown RBP19.61■□□□□ 0.73
ERCC1-203ENST00000340192 DDX10Q13206 875 aaKnown RBP19.61■□□□□ 0.73
ERCC1-203ENST00000340192 ZNF831Q5JPB2 1677 aa19.61■□□□□ 0.73
ERCC1-203ENST00000340192 ADAMTS7Q9UKP4 1686 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms