RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 THRAP3Q9Y2W1 955 aaKnown RBP19.44■□□□□ 0.7
CSRP1-201ENST00000340006 RIPK4P57078 832 aa19.43■□□□□ 0.7
CSRP1-201ENST00000340006 TMPOP42166 694 aaKnown RBP19.43■□□□□ 0.7
CSRP1-201ENST00000340006 MTHFSDQ2M296 383 aaKnown RBP19.43■□□□□ 0.7
CSRP1-201ENST00000340006 AMOTQ4VCS5 1084 aa19.43■□□□□ 0.7
CSRP1-201ENST00000340006 ZNF772Q68DY9 489 aaPredicted RBP19.43■□□□□ 0.7
CSRP1-201ENST00000340006 SPG7Q9UQ90 795 aa19.42■□□□□ 0.7
CSRP1-201ENST00000340006 NFE2L2Q16236 605 aa19.41■□□□□ 0.7
CSRP1-201ENST00000340006 GAS2L2Q8NHY3 880 aa19.41■□□□□ 0.7
CSRP1-201ENST00000340006 GJD4Q96KN9 370 aaPredicted RBP19.41■□□□□ 0.7
CSRP1-201ENST00000340006 A0A0G2JS52 829 aa19.41■□□□□ 0.7
CSRP1-201ENST00000340006 FAM98CQ17RN3 349 aaKnown RBP19.41■□□□□ 0.7
CSRP1-201ENST00000340006 NCAPD2Q15021 1401 aa19.4■□□□□ 0.7
CSRP1-201ENST00000340006 ZCRB1Q8TBF4 217 aaKnown RBP19.4■□□□□ 0.7
CSRP1-201ENST00000340006 EXOC5O00471 708 aa19.39■□□□□ 0.7
CSRP1-201ENST00000340006 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.39■□□□□ 0.69
CSRP1-201ENST00000340006 C1orf141Q5JVX7 400 aa19.39■□□□□ 0.69
CSRP1-201ENST00000340006 ZNF530Q6P9A1 599 aaPredicted RBP19.39■□□□□ 0.69
CSRP1-201ENST00000340006 CDCA7Q9BWT1 371 aaPredicted RBP19.39■□□□□ 0.69
CSRP1-201ENST00000340006 BARGINQ6ZT62 677 aa19.38■□□□□ 0.69
CSRP1-201ENST00000340006 DDX54Q8TDD1 881 aaKnown RBP19.38■□□□□ 0.69
CSRP1-201ENST00000340006 MEGF6O75095 1541 aa19.38■□□□□ 0.69
CSRP1-201ENST00000340006 RTF1Q92541 710 aaKnown RBP19.37■□□□□ 0.69
CSRP1-201ENST00000340006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.37■□□□□ 0.69
CSRP1-201ENST00000340006 NGEFQ8N5V2 710 aa19.37■□□□□ 0.69
CSRP1-201ENST00000340006 GNAT3A8MTJ3 354 aa19.36■□□□□ 0.69
CSRP1-201ENST00000340006 DDB1Q16531 1140 aa19.35■□□□□ 0.69
CSRP1-201ENST00000340006 PARP4Q9UKK3 1724 aaKnown RBP19.35■□□□□ 0.69
CSRP1-201ENST00000340006 DLG5Q8TDM6 1919 aa19.35■□□□□ 0.69
CSRP1-201ENST00000340006 LMOD3Q0VAK6 560 aa19.35■□□□□ 0.69
CSRP1-201ENST00000340006 ATRNO75882 1429 aa19.34■□□□□ 0.69
CSRP1-201ENST00000340006 AKAP4Q5JQC9 854 aa19.34■□□□□ 0.69
CSRP1-201ENST00000340006 IFNL2Q8IZJ0 200 aa19.34■□□□□ 0.69
CSRP1-201ENST00000340006 WWC1Q8IX03 1113 aa19.33■□□□□ 0.69
CSRP1-201ENST00000340006 OVOS2A0A0G2JMS6 1433 aa19.33■□□□□ 0.69
CSRP1-201ENST00000340006 TRIM35Q9UPQ4 493 aa19.33■□□□□ 0.68
CSRP1-201ENST00000340006 DCTN1Q14203 1278 aa19.32■□□□□ 0.68
CSRP1-201ENST00000340006 MCM10Q7L590 875 aa19.32■□□□□ 0.68
CSRP1-201ENST00000340006 PCDH11XQ9BZA7 1347 aa19.32■□□□□ 0.68
CSRP1-201ENST00000340006 PCDH11YQ9BZA8 1340 aa19.32■□□□□ 0.68
CSRP1-201ENST00000340006 RBM6P78332 1123 aaKnown RBP19.32■□□□□ 0.68
CSRP1-201ENST00000340006 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
CSRP1-201ENST00000340006 MPRIPQ6WCQ1 1025 aa19.32■□□□□ 0.68
CSRP1-201ENST00000340006 CYP27B1O15528 508 aa19.31■□□□□ 0.68
CSRP1-201ENST00000340006 PHKG2P15735 406 aa19.31■□□□□ 0.68
CSRP1-201ENST00000340006 RXRBP28702 533 aa19.31■□□□□ 0.68
CSRP1-201ENST00000340006 PDE3BQ13370 1112 aa19.31■□□□□ 0.68
CSRP1-201ENST00000340006 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
CSRP1-201ENST00000340006 ZBED9Q6R2W3 1325 aa19.31■□□□□ 0.68
CSRP1-201ENST00000340006 KAT6BQ8WYB5 2073 aa19.31■□□□□ 0.68
CSRP1-201ENST00000340006 HTATSF1O43719 755 aaKnown RBP19.3■□□□□ 0.68
CSRP1-201ENST00000340006 RGS17Q9UGC6 210 aaPredicted RBP19.3■□□□□ 0.68
CSRP1-201ENST00000340006 MAP3K5Q99683 1374 aa19.3■□□□□ 0.68
CSRP1-201ENST00000340006 DISP2A7MBM2 1401 aa19.3■□□□□ 0.68
CSRP1-201ENST00000340006 THUMPD2Q9BTF0 503 aaKnown RBP19.3■□□□□ 0.68
CSRP1-201ENST00000340006 LGR6Q9HBX8 967 aa19.3■□□□□ 0.68
CSRP1-201ENST00000340006 PLEKHG2Q9H7P9 1386 aa19.29■□□□□ 0.68
CSRP1-201ENST00000340006 HSP90AB1P08238 724 aaKnown RBP19.29■□□□□ 0.68
CSRP1-201ENST00000340006 SEPT12Q8IYM1 358 aa19.29■□□□□ 0.68
CSRP1-201ENST00000340006 WNK3Q9BYP7 1800 aa19.29■□□□□ 0.68
CSRP1-201ENST00000340006 GLI3P10071 1580 aa19.28■□□□□ 0.68
CSRP1-201ENST00000340006 ONECUT3O60422 494 aaPredicted RBP19.28■□□□□ 0.68
CSRP1-201ENST00000340006 LAS1LQ9Y4W2 734 aaKnown RBP19.28■□□□□ 0.68
CSRP1-201ENST00000340006 PKD1L3Q7Z443 1732 aa19.28■□□□□ 0.68
CSRP1-201ENST00000340006 GOLGA2Q08379 1002 aa19.28■□□□□ 0.68
CSRP1-201ENST00000340006 IL17REQ8NFR9 667 aa19.28■□□□□ 0.68
CSRP1-201ENST00000340006 CALD1Q05682 793 aaKnown RBP19.27■□□□□ 0.68
CSRP1-201ENST00000340006 WDR63Q8IWG1 891 aa19.27■□□□□ 0.68
CSRP1-201ENST00000340006 POTEAQ6S8J7 498 aa19.26■□□□□ 0.67
CSRP1-201ENST00000340006 DCAF5Q96JK2 942 aa19.26■□□□□ 0.67
CSRP1-201ENST00000340006 RNMTO43148 476 aaKnown RBP19.26■□□□□ 0.67
CSRP1-201ENST00000340006 TEFQ10587 303 aa19.25■□□□□ 0.67
CSRP1-201ENST00000340006 CDCA7LQ96GN5 454 aa19.24■□□□□ 0.67
CSRP1-201ENST00000340006 MARCH10Q8NA82 808 aaPredicted RBP19.24■□□□□ 0.67
CSRP1-201ENST00000340006 ZNF521Q96K83 1311 aa19.23■□□□□ 0.67
CSRP1-201ENST00000340006 TNS2Q63HR2 1409 aa19.23■□□□□ 0.67
CSRP1-201ENST00000340006 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
CSRP1-201ENST00000340006 NKX1-1Q15270 411 aaPredicted RBP19.23■□□□□ 0.67
CSRP1-201ENST00000340006 SHANK3Q9BYB0 1731 aa19.22■□□□□ 0.67
CSRP1-201ENST00000340006 CABP4P57796 275 aa19.21■□□□□ 0.67
CSRP1-201ENST00000340006 TAF7Q15545 349 aaPredicted RBP19.21■□□□□ 0.67
CSRP1-201ENST00000340006 NFATC2IPQ8NCF5 419 aa19.21■□□□□ 0.67
CSRP1-201ENST00000340006 LRRC37A3O60309 1634 aa19.21■□□□□ 0.67
CSRP1-201ENST00000340006 FAM182BQ5T319 152 aa19.21■□□□□ 0.67
CSRP1-201ENST00000340006 SYTL4Q96C24 671 aaPredicted RBP19.21■□□□□ 0.67
CSRP1-201ENST00000340006 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
CSRP1-201ENST00000340006 E9PSI1 815 aa19.2■□□□□ 0.66
CSRP1-201ENST00000340006 GNAI1P63096 354 aa19.2■□□□□ 0.66
CSRP1-201ENST00000340006 SPINK5Q9NQ38 1064 aaPredicted RBP19.2■□□□□ 0.66
CSRP1-201ENST00000340006 ERVV-2B6SEH9 535 aa19.19■□□□□ 0.66
CSRP1-201ENST00000340006 SLFN5Q08AF3 891 aa19.19■□□□□ 0.66
CSRP1-201ENST00000340006 KRT27Q7Z3Y8 459 aa19.19■□□□□ 0.66
CSRP1-201ENST00000340006 MYH16Q9H6N6 1097 aa19.19■□□□□ 0.66
CSRP1-201ENST00000340006 THSD7AQ9UPZ6 1657 aa19.19■□□□□ 0.66
CSRP1-201ENST00000340006 IL16Q14005 1332 aa19.19■□□□□ 0.66
CSRP1-201ENST00000340006 SCN11AQ9UI33 1791 aa19.19■□□□□ 0.66
CSRP1-201ENST00000340006 CFAP44Q96MT7 982 aa19.19■□□□□ 0.66
CSRP1-201ENST00000340006 SLC52A2Q9HAB3 445 aa19.19■□□□□ 0.66
CSRP1-201ENST00000340006 BTBD11A6QL63 1104 aa19.18■□□□□ 0.66
CSRP1-201ENST00000340006 ACSBG1Q96GR2 724 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms