RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 CTNNA3Q9UI47 895 aa14.75□□□□□ -0.05
OTOF-203ENST00000339598 CASTP20810 708 aaKnown RBP14.75□□□□□ -0.05
OTOF-203ENST00000339598 H0YHG0 523 aa14.74□□□□□ -0.05
OTOF-203ENST00000339598 MX1P20591 662 aa14.74□□□□□ -0.05
OTOF-203ENST00000339598 MEX3CQ5U5Q3 659 aaKnown RBP14.74□□□□□ -0.05
OTOF-203ENST00000339598 CCDC69A6NI79 296 aa14.74□□□□□ -0.05
OTOF-203ENST00000339598 GLRX3O76003 335 aaKnown RBP14.74□□□□□ -0.05
OTOF-203ENST00000339598 KRT18P05783 430 aaKnown RBP14.74□□□□□ -0.05
OTOF-203ENST00000339598 ZSCAN30Q86W11 494 aa14.74□□□□□ -0.05
OTOF-203ENST00000339598 DHX8Q14562 1220 aaKnown RBP14.74□□□□□ -0.05
OTOF-203ENST00000339598 HSP90AB2PQ58FF8 381 aa14.74□□□□□ -0.05
OTOF-203ENST00000339598 AXDND1Q5T1B0 1012 aaPredicted RBP14.74□□□□□ -0.05
OTOF-203ENST00000339598 CCDC66A2RUB6 948 aa14.73□□□□□ -0.05
OTOF-203ENST00000339598 CCDC85AQ96PX6 553 aaPredicted RBP14.73□□□□□ -0.05
OTOF-203ENST00000339598 PRDM11Q9NQV5 511 aa14.73□□□□□ -0.05
OTOF-203ENST00000339598 NESP48681 1621 aa14.73□□□□□ -0.05
OTOF-203ENST00000339598 WAPLQ7Z5K2 1190 aa14.73□□□□□ -0.05
OTOF-203ENST00000339598 GNAT3A8MTJ3 354 aa14.73□□□□□ -0.05
OTOF-203ENST00000339598 TBC1D2Q9BYX2 928 aa14.73□□□□□ -0.05
OTOF-203ENST00000339598 UQCRHLA0A096LP55 91 aa14.73□□□□□ -0.05
OTOF-203ENST00000339598 UQCRHP07919 91 aa14.73□□□□□ -0.05
OTOF-203ENST00000339598 ATP2B2Q01814 1243 aa14.73□□□□□ -0.05
OTOF-203ENST00000339598 ZSCAN25Q6NSZ9 544 aa14.73□□□□□ -0.05
OTOF-203ENST00000339598 SKIDA1Q1XH10 827 aa14.72□□□□□ -0.05
OTOF-203ENST00000339598 ALDH1L2Q3SY69 923 aa14.72□□□□□ -0.05
OTOF-203ENST00000339598 CCDC83Q8IWF9 413 aa14.72□□□□□ -0.05
OTOF-203ENST00000339598 CWC15Q9P013 229 aaKnown RBP14.72□□□□□ -0.05
OTOF-203ENST00000339598 DACH1Q9UI36 760 aa14.72□□□□□ -0.05
OTOF-203ENST00000339598 PDIA4P13667 645 aaKnown RBP14.72□□□□□ -0.05
OTOF-203ENST00000339598 ZC3H6P61129 1189 aaKnown RBP14.72□□□□□ -0.05
OTOF-203ENST00000339598 MAP3K11Q16584 847 aa14.72□□□□□ -0.05
OTOF-203ENST00000339598 CDKL5O76039 1030 aa14.72□□□□□ -0.05
OTOF-203ENST00000339598 XPCQ01831 940 aaPredicted RBP14.72□□□□□ -0.05
OTOF-203ENST00000339598 STIM1Q13586 685 aa14.72□□□□□ -0.05
OTOF-203ENST00000339598 POLA1P09884 1462 aaPredicted RBP14.71□□□□□ -0.05
OTOF-203ENST00000339598 F6X3S4 739 aa14.71□□□□□ -0.05
OTOF-203ENST00000339598 IDH1O75874 414 aaKnown RBP14.71□□□□□ -0.05
OTOF-203ENST00000339598 TDO2P48775 406 aa14.71□□□□□ -0.06
OTOF-203ENST00000339598 PRPF40BQ6NWY9 871 aaKnown RBP14.71□□□□□ -0.06
OTOF-203ENST00000339598 UBAC1Q9BSL1 405 aa14.71□□□□□ -0.06
OTOF-203ENST00000339598 TRIM27P14373 513 aa14.7□□□□□ -0.06
OTOF-203ENST00000339598 ZHX3Q9H4I2 956 aa14.7□□□□□ -0.06
OTOF-203ENST00000339598 FBXO3Q9UK99 471 aa14.7□□□□□ -0.06
OTOF-203ENST00000339598 BOLA2Q9H3K6 86 aa14.7□□□□□ -0.06
OTOF-203ENST00000339598 KLHL34Q8N239 644 aa14.7□□□□□ -0.06
OTOF-203ENST00000339598 DEF6Q9H4E7 631 aa14.7□□□□□ -0.06
OTOF-203ENST00000339598 ABCC11Q96J66 1382 aa14.69□□□□□ -0.06
OTOF-203ENST00000339598 CAMK4Q16566 473 aa14.69□□□□□ -0.06
OTOF-203ENST00000339598 NOL7Q9UMY1 257 aaKnown RBP14.69□□□□□ -0.06
OTOF-203ENST00000339598 NME9Q86XW9 330 aa14.69□□□□□ -0.06
OTOF-203ENST00000339598 EMILIN1Q9Y6C2 1016 aa14.69□□□□□ -0.06
OTOF-203ENST00000339598 TOPBP1Q92547 1522 aa14.69□□□□□ -0.06
OTOF-203ENST00000339598 CBFA2T2O43439 604 aa14.69□□□□□ -0.06
OTOF-203ENST00000339598 NKTRP30414 1462 aaKnown RBP14.69□□□□□ -0.06
OTOF-203ENST00000339598 SSFA2P28290 1259 aa14.69□□□□□ -0.06
OTOF-203ENST00000339598 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
OTOF-203ENST00000339598 LRPPRCP42704 1394 aaKnown RBP14.68□□□□□ -0.06
OTOF-203ENST00000339598 TSPYL1Q9H0U9 437 aa14.68□□□□□ -0.06
OTOF-203ENST00000339598 MYO6Q9UM54 1294 aa14.68□□□□□ -0.06
OTOF-203ENST00000339598 LEKR1Q6ZMV7 388 aa14.68□□□□□ -0.06
OTOF-203ENST00000339598 EPRSP07814 1512 aaKnown RBP14.68□□□□□ -0.06
OTOF-203ENST00000339598 SOGA3Q5TF21 947 aa14.68□□□□□ -0.06
OTOF-203ENST00000339598 LUC7LQ9NQ29 371 aaKnown RBP14.68□□□□□ -0.06
OTOF-203ENST00000339598 RAB11FIP3O75154 756 aa14.68□□□□□ -0.06
OTOF-203ENST00000339598 CFAP100Q494V2 611 aa14.68□□□□□ -0.06
OTOF-203ENST00000339598 LRP2BPQ9P2M1 347 aa14.68□□□□□ -0.06
OTOF-203ENST00000339598 CDK13Q14004 1512 aaKnown RBP14.67□□□□□ -0.06
OTOF-203ENST00000339598 PTCD1O75127 700 aaKnown RBP14.67□□□□□ -0.06
OTOF-203ENST00000339598 ANKLE2Q86XL3 938 aa14.67□□□□□ -0.06
OTOF-203ENST00000339598 TANGO6Q9C0B7 1094 aa14.67□□□□□ -0.06
OTOF-203ENST00000339598 IMMTQ16891 758 aaKnown RBP14.67□□□□□ -0.06
OTOF-203ENST00000339598 TNPO1Q92973 898 aaKnown RBP14.67□□□□□ -0.06
OTOF-203ENST00000339598 SCAND2PQ9GZW5 306 aaPredicted RBP14.67□□□□□ -0.06
OTOF-203ENST00000339598 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
OTOF-203ENST00000339598 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
OTOF-203ENST00000339598 RAI14Q9P0K7 980 aa14.67□□□□□ -0.06
OTOF-203ENST00000339598 SSBP05455 408 aaKnown RBP eCLIP14.66□□□□□ -0.06
OTOF-203ENST00000339598 SYCP1Q15431 976 aa14.66□□□□□ -0.06
OTOF-203ENST00000339598 ABCF2Q9UG63 623 aa14.66□□□□□ -0.06
OTOF-203ENST00000339598 LARP1Q6PKG0 1096 aaKnown RBP14.66□□□□□ -0.06
OTOF-203ENST00000339598 TOP2BQ02880 1626 aa14.66□□□□□ -0.06
OTOF-203ENST00000339598 ADGRF5Q8IZF2 1346 aa14.66□□□□□ -0.06
OTOF-203ENST00000339598 ERLIN1O75477 346 aa14.65□□□□□ -0.06
OTOF-203ENST00000339598 CCDC181Q5TID7 509 aa14.65□□□□□ -0.06
OTOF-203ENST00000339598 PIBF1Q8WXW3 757 aa14.65□□□□□ -0.06
OTOF-203ENST00000339598 SMTNL1A8MU46 457 aa14.65□□□□□ -0.06
OTOF-203ENST00000339598 UBXN4Q92575 508 aa14.65□□□□□ -0.06
OTOF-203ENST00000339598 AIDAQ96BJ3 306 aa14.65□□□□□ -0.06
OTOF-203ENST00000339598 LRRFIP2Q9Y608 721 aaKnown RBP14.65□□□□□ -0.06
OTOF-203ENST00000339598 CCDC8Q9H0W5 538 aaPredicted RBP14.65□□□□□ -0.06
OTOF-203ENST00000339598 RDXP35241 583 aaKnown RBP14.65□□□□□ -0.06
OTOF-203ENST00000339598 SFPQP23246 707 aaKnown RBP eCLIP14.64□□□□□ -0.07
OTOF-203ENST00000339598 METTL24Q5JXM2 366 aa14.64□□□□□ -0.07
OTOF-203ENST00000339598 CCDC191Q8NCU4 936 aa14.64□□□□□ -0.07
OTOF-203ENST00000339598 CNKSR2Q8WXI2 1034 aa14.64□□□□□ -0.07
OTOF-203ENST00000339598 PDCL3Q9H2J4 239 aa14.64□□□□□ -0.07
OTOF-203ENST00000339598 SH2B1Q9NRF2 756 aaPredicted RBP14.64□□□□□ -0.07
OTOF-203ENST00000339598 LIMCH1Q9UPQ0 1083 aa14.64□□□□□ -0.07
OTOF-203ENST00000339598 NCOA1Q15788 1441 aa14.64□□□□□ -0.07
OTOF-203ENST00000339598 KCNH5Q8NCM2 988 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms