RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 CCDC30Q5VVM6 783 aa14.94□□□□□ -0.02
RIOK3-201ENST00000339486 TXNDC2Q86VQ3 553 aa14.94□□□□□ -0.02
RIOK3-201ENST00000339486 LMBRD1Q9NUN5 540 aa14.94□□□□□ -0.02
RIOK3-201ENST00000339486 HDAC5Q9UQL6 1122 aa14.94□□□□□ -0.02
RIOK3-201ENST00000339486 SLC52A1Q9NWF4 448 aa14.93□□□□□ -0.02
RIOK3-201ENST00000339486 PKP1Q13835 747 aa14.93□□□□□ -0.02
RIOK3-201ENST00000339486 IDI1Q13907 227 aa14.93□□□□□ -0.02
RIOK3-201ENST00000339486 CWC27Q6UX04 472 aaKnown RBP14.93□□□□□ -0.02
RIOK3-201ENST00000339486 FERMT3Q86UX7 667 aa14.93□□□□□ -0.02
RIOK3-201ENST00000339486 PPP1R9BQ96SB3 815 aa14.93□□□□□ -0.02
RIOK3-201ENST00000339486 PTPRTO14522 1441 aa14.93□□□□□ -0.02
RIOK3-201ENST00000339486 ABCC10Q5T3U5 1492 aa14.92□□□□□ -0.02
RIOK3-201ENST00000339486 RAPGEF3O95398 923 aa14.92□□□□□ -0.02
RIOK3-201ENST00000339486 CLASRPQ8N2M8 674 aaKnown RBP14.92□□□□□ -0.02
RIOK3-201ENST00000339486 DDX54Q8TDD1 881 aaKnown RBP14.92□□□□□ -0.02
RIOK3-201ENST00000339486 PLCH2O75038 1416 aa14.92□□□□□ -0.02
RIOK3-201ENST00000339486 CHAMP1Q96JM3 812 aa14.92□□□□□ -0.02
RIOK3-201ENST00000339486 NPHP1O15259 732 aa14.92□□□□□ -0.02
RIOK3-201ENST00000339486 EIF4G3O43432 1585 aaKnown RBP14.92□□□□□ -0.02
RIOK3-201ENST00000339486 TPM4P67936 248 aa14.91□□□□□ -0.02
RIOK3-201ENST00000339486 KRT24Q2M2I5 525 aa14.91□□□□□ -0.02
RIOK3-201ENST00000339486 RNF20Q5VTR2 975 aa14.91□□□□□ -0.02
RIOK3-201ENST00000339486 LARP1BQ659C4 914 aaKnown RBP14.91□□□□□ -0.02
RIOK3-201ENST00000339486 SRCIN1Q9C0H9 1055 aa14.91□□□□□ -0.02
RIOK3-201ENST00000339486 PRDM15P57071 1507 aaPredicted RBP14.91□□□□□ -0.02
RIOK3-201ENST00000339486 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
RIOK3-201ENST00000339486 HSP90AB4PQ58FF6 505 aa14.91□□□□□ -0.02
RIOK3-201ENST00000339486 PDE1AP54750 535 aa14.91□□□□□ -0.02
RIOK3-201ENST00000339486 GNL2Q13823 731 aaKnown RBP14.91□□□□□ -0.02
RIOK3-201ENST00000339486 NOLC1Q14978 699 aaKnown RBP eCLIP14.91□□□□□ -0.02
RIOK3-201ENST00000339486 CAMK4Q16566 473 aa14.91□□□□□ -0.02
RIOK3-201ENST00000339486 CCDC83Q8IWF9 413 aa14.91□□□□□ -0.02
RIOK3-201ENST00000339486 KRT85P78386 507 aa14.9□□□□□ -0.02
RIOK3-201ENST00000339486 TEFQ10587 303 aa14.9□□□□□ -0.02
RIOK3-201ENST00000339486 JAKMIP1Q96N16 626 aaKnown RBP14.9□□□□□ -0.02
RIOK3-201ENST00000339486 TNMDQ9H2S6 317 aa14.9□□□□□ -0.02
RIOK3-201ENST00000339486 CYP46A1Q9Y6A2 500 aa14.9□□□□□ -0.02
RIOK3-201ENST00000339486 RTEL1-TNFRSF6BF6WH68 1400 aa14.9□□□□□ -0.02
RIOK3-201ENST00000339486 PPP4R3BQ5MIZ7 849 aa14.9□□□□□ -0.02
RIOK3-201ENST00000339486 USP48Q86UV5 1035 aa14.9□□□□□ -0.02
RIOK3-201ENST00000339486 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
RIOK3-201ENST00000339486 CASTP20810 708 aaKnown RBP14.89□□□□□ -0.03
RIOK3-201ENST00000339486 TMEM63CQ9P1W3 806 aa14.89□□□□□ -0.03
RIOK3-201ENST00000339486 POLKQ9UBT6 870 aa14.89□□□□□ -0.03
RIOK3-201ENST00000339486 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.89□□□□□ -0.03
RIOK3-201ENST00000339486 FAM177BA6PVY3 158 aa14.89□□□□□ -0.03
RIOK3-201ENST00000339486 SRGAP3O43295 1099 aa14.89□□□□□ -0.03
RIOK3-201ENST00000339486 CEBPZQ03701 1054 aaKnown RBP14.89□□□□□ -0.03
RIOK3-201ENST00000339486 GIMAP6Q6P9H5 292 aa14.89□□□□□ -0.03
RIOK3-201ENST00000339486 CCDC112Q8NEF3 446 aa14.89□□□□□ -0.03
RIOK3-201ENST00000339486 PODXL2Q9NZ53 605 aa14.89□□□□□ -0.03
RIOK3-201ENST00000339486 TARBP1Q13395 1621 aaKnown RBP14.89□□□□□ -0.03
RIOK3-201ENST00000339486 PDCP20941 246 aa14.89□□□□□ -0.03
RIOK3-201ENST00000339486 NUP62CLQ9H1M0 184 aa14.89□□□□□ -0.03
RIOK3-201ENST00000339486 A0A1W2PP64 1363 aa14.88□□□□□ -0.03
RIOK3-201ENST00000339486 STK3Q13188 491 aa14.88□□□□□ -0.03
RIOK3-201ENST00000339486 G3BP1Q13283 466 aaKnown RBP eCLIP14.88□□□□□ -0.03
RIOK3-201ENST00000339486 HDGFL1Q5TGJ6 251 aa14.88□□□□□ -0.03
RIOK3-201ENST00000339486 CEP85Q6P2H3 762 aa14.88□□□□□ -0.03
RIOK3-201ENST00000339486 HOMER1Q86YM7 354 aa14.88□□□□□ -0.03
RIOK3-201ENST00000339486 POLR1AO95602 1720 aaPredicted RBP14.88□□□□□ -0.03
RIOK3-201ENST00000339486 GSPT1P15170 499 aaKnown RBP14.88□□□□□ -0.03
RIOK3-201ENST00000339486 PRIMPOLQ96LW4 560 aa14.88□□□□□ -0.03
RIOK3-201ENST00000339486 PDRG1Q9NUG6 133 aa14.88□□□□□ -0.03
RIOK3-201ENST00000339486 NUTM2GQ5VZR2 741 aa14.88□□□□□ -0.03
RIOK3-201ENST00000339486 CCDC73Q6ZRK6 1079 aa14.88□□□□□ -0.03
RIOK3-201ENST00000339486 AEBP1Q8IUX7 1158 aa14.88□□□□□ -0.03
RIOK3-201ENST00000339486 TNNT3P45378 269 aaPredicted RBP14.87□□□□□ -0.03
RIOK3-201ENST00000339486 ESYT1Q9BSJ8 1104 aa14.87□□□□□ -0.03
RIOK3-201ENST00000339486 CNPY2Q9Y2B0 182 aa14.87□□□□□ -0.03
RIOK3-201ENST00000339486 ADGRL1O94910 1474 aa14.87□□□□□ -0.03
RIOK3-201ENST00000339486 STX6O43752 255 aa14.87□□□□□ -0.03
RIOK3-201ENST00000339486 MAP3K11Q16584 847 aa14.87□□□□□ -0.03
RIOK3-201ENST00000339486 PSMA5P28066 241 aa14.86□□□□□ -0.03
RIOK3-201ENST00000339486 LRRFIP2Q9Y608 721 aaKnown RBP14.86□□□□□ -0.03
RIOK3-201ENST00000339486 ERVK-7P63135 1459 aa14.86□□□□□ -0.03
RIOK3-201ENST00000339486 UVSSAQ2YD98 709 aa14.86□□□□□ -0.03
RIOK3-201ENST00000339486 FSD1Q9BTV5 496 aa14.86□□□□□ -0.03
RIOK3-201ENST00000339486 LIMCH1Q9UPQ0 1083 aa14.86□□□□□ -0.03
RIOK3-201ENST00000339486 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
RIOK3-201ENST00000339486 CKAP2LQ8IYA6 745 aa14.86□□□□□ -0.03
RIOK3-201ENST00000339486 NUDT16Q96DE0 195 aaKnown RBP14.86□□□□□ -0.03
RIOK3-201ENST00000339486 SPG7Q9UQ90 795 aa14.86□□□□□ -0.03
RIOK3-201ENST00000339486 MAST1Q9Y2H9 1570 aa14.86□□□□□ -0.03
RIOK3-201ENST00000339486 C16orf45Q96MC5 204 aaPredicted RBP14.85□□□□□ -0.03
RIOK3-201ENST00000339486 PTPRCP08575 1304 aa14.85□□□□□ -0.03
RIOK3-201ENST00000339486 FILIP1Q7Z7B0 1213 aa14.85□□□□□ -0.03
RIOK3-201ENST00000339486 CCAR2Q8N163 923 aaKnown RBP14.85□□□□□ -0.03
RIOK3-201ENST00000339486 SDF4Q9BRK5 362 aa14.85□□□□□ -0.03
RIOK3-201ENST00000339486 TERF1P54274 439 aa14.85□□□□□ -0.03
RIOK3-201ENST00000339486 UBE2HP62256 183 aa14.85□□□□□ -0.03
RIOK3-201ENST00000339486 C17orf53Q8N3J3 647 aaPredicted RBP14.85□□□□□ -0.03
RIOK3-201ENST00000339486 ZRANB1Q9UGI0 708 aa14.85□□□□□ -0.03
RIOK3-201ENST00000339486 TRPM1Q7Z4N2 1603 aa14.85□□□□□ -0.03
RIOK3-201ENST00000339486 PRPF40BQ6NWY9 871 aaKnown RBP14.84□□□□□ -0.03
RIOK3-201ENST00000339486 TSC1Q92574 1164 aa14.84□□□□□ -0.03
RIOK3-201ENST00000339486 SPATA32Q96LK8 384 aa14.84□□□□□ -0.03
RIOK3-201ENST00000339486 SYNMO15061 1565 aa14.84□□□□□ -0.03
RIOK3-201ENST00000339486 FMNL2Q96PY5 1086 aa14.84□□□□□ -0.03
RIOK3-201ENST00000339486 NCBP3Q53F19 620 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms