RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 KIF16BQ96L93 1317 aa20.67■□□□□ 0.9
LITAF-201ENST00000339430 GCP02774 474 aa20.67■□□□□ 0.9
LITAF-201ENST00000339430 NFAT5O94916 1531 aa20.66■□□□□ 0.9
LITAF-201ENST00000339430 TNS3Q68CZ2 1445 aa20.65■□□□□ 0.9
LITAF-201ENST00000339430 ZBTB7CA1YPR0 619 aa20.65■□□□□ 0.9
LITAF-201ENST00000339430 ELL2O00472 640 aaPredicted RBP20.65■□□□□ 0.9
LITAF-201ENST00000339430 IPO8O15397 1037 aaKnown RBP20.65■□□□□ 0.9
LITAF-201ENST00000339430 SPATA31A3Q5VYP0 1347 aa20.64■□□□□ 0.9
LITAF-201ENST00000339430 HOXC9P31274 260 aa20.64■□□□□ 0.89
LITAF-201ENST00000339430 LTN1O94822 1766 aa20.64■□□□□ 0.89
LITAF-201ENST00000339430 SLIT3O75094 1523 aa20.64■□□□□ 0.89
LITAF-201ENST00000339430 DLG5Q8TDM6 1919 aa20.64■□□□□ 0.89
LITAF-201ENST00000339430 ALDH1L2Q3SY69 923 aa20.64■□□□□ 0.89
LITAF-201ENST00000339430 HDAC1Q13547 482 aaPredicted RBP20.63■□□□□ 0.89
LITAF-201ENST00000339430 TSPYL6Q8N831 410 aa20.63■□□□□ 0.89
LITAF-201ENST00000339430 ZBTB40Q9NUA8 1239 aa20.63■□□□□ 0.89
LITAF-201ENST00000339430 SOS2Q07890 1332 aaPredicted RBP20.63■□□□□ 0.89
LITAF-201ENST00000339430 KIF24Q5T7B8 1368 aa20.62■□□□□ 0.89
LITAF-201ENST00000339430 UPF2Q9HAU5 1272 aaKnown RBP20.62■□□□□ 0.89
LITAF-201ENST00000339430 CABLES1Q8TDN4 633 aa20.61■□□□□ 0.89
LITAF-201ENST00000339430 MED1Q15648 1581 aaPredicted RBP20.61■□□□□ 0.89
LITAF-201ENST00000339430 FAM83GA6ND36 823 aa20.6■□□□□ 0.89
LITAF-201ENST00000339430 VAMP4O75379 141 aa20.6■□□□□ 0.89
LITAF-201ENST00000339430 MBIPQ9NS73 344 aa20.6■□□□□ 0.89
LITAF-201ENST00000339430 RTL1A6NKG5 1358 aa20.59■□□□□ 0.89
LITAF-201ENST00000339430 ARHGEF10O15013 1369 aa20.59■□□□□ 0.89
LITAF-201ENST00000339430 ARHGEF25Q86VW2 580 aa20.59■□□□□ 0.89
LITAF-201ENST00000339430 LTV1Q96GA3 475 aaPredicted RBP20.59■□□□□ 0.89
LITAF-201ENST00000339430 GNAI1P63096 354 aa20.59■□□□□ 0.89
LITAF-201ENST00000339430 DCTN1Q14203 1278 aa20.59■□□□□ 0.89
LITAF-201ENST00000339430 SULT6B1Q6IMI4 303 aa20.59■□□□□ 0.89
LITAF-201ENST00000339430 AEBP1Q8IUX7 1158 aa20.59■□□□□ 0.89
LITAF-201ENST00000339430 IP6K1Q92551 441 aa20.59■□□□□ 0.89
LITAF-201ENST00000339430 ZC3H6P61129 1189 aaKnown RBP20.58■□□□□ 0.89
LITAF-201ENST00000339430 FRAT2O75474 233 aaPredicted RBP20.58■□□□□ 0.88
LITAF-201ENST00000339430 CALD1Q05682 793 aaKnown RBP20.58■□□□□ 0.88
LITAF-201ENST00000339430 SMC5Q8IY18 1101 aa20.58■□□□□ 0.88
LITAF-201ENST00000339430 MRPL50Q8N5N7 158 aaKnown RBP20.58■□□□□ 0.88
LITAF-201ENST00000339430 TBC1D32Q96NH3 1257 aa20.58■□□□□ 0.88
LITAF-201ENST00000339430 IFT57Q9NWB7 429 aa20.58■□□□□ 0.88
LITAF-201ENST00000339430 NHSL1Q5SYE7 1610 aa20.58■□□□□ 0.88
LITAF-201ENST00000339430 BECN1Q14457 450 aa20.57■□□□□ 0.88
LITAF-201ENST00000339430 ROBO1Q9Y6N7 1651 aa20.56■□□□□ 0.88
LITAF-201ENST00000339430 RGPD1P0DJD0 1748 aa20.56■□□□□ 0.88
LITAF-201ENST00000339430 C1orf115Q9H7X2 142 aa20.56■□□□□ 0.88
LITAF-201ENST00000339430 EYA1Q99502 592 aa20.56■□□□□ 0.88
LITAF-201ENST00000339430 SLKQ9H2G2 1235 aaPredicted RBP20.56■□□□□ 0.88
LITAF-201ENST00000339430 ZNF853P0CG23 659 aa20.55■□□□□ 0.88
LITAF-201ENST00000339430 TWISTNBQ3B726 338 aaPredicted RBP20.54■□□□□ 0.88
LITAF-201ENST00000339430 C8orf58Q8NAV2 365 aa20.54■□□□□ 0.88
LITAF-201ENST00000339430 ZNF428Q96B54 188 aa20.54■□□□□ 0.88
LITAF-201ENST00000339430 PHRF1Q9P1Y6 1649 aaKnown RBP20.54■□□□□ 0.88
LITAF-201ENST00000339430 MFAP1P55081 439 aaKnown RBP20.54■□□□□ 0.88
LITAF-201ENST00000339430 LNPKQ9C0E8 428 aa20.54■□□□□ 0.88
LITAF-201ENST00000339430 IGSF1Q8N6C5 1336 aa20.53■□□□□ 0.88
LITAF-201ENST00000339430 BRPF1P55201 1214 aaPredicted RBP20.53■□□□□ 0.88
LITAF-201ENST00000339430 CFAP44Q96MT7 982 aa20.53■□□□□ 0.88
LITAF-201ENST00000339430 ZBTB7BO15156 539 aaPredicted RBP20.52■□□□□ 0.88
LITAF-201ENST00000339430 LMOD3Q0VAK6 560 aa20.52■□□□□ 0.88
LITAF-201ENST00000339430 AXIN2Q9Y2T1 843 aa20.52■□□□□ 0.88
LITAF-201ENST00000339430 CRYBG1Q9Y4K1 1723 aa20.52■□□□□ 0.88
LITAF-201ENST00000339430 NUCB1Q02818 461 aa20.51■□□□□ 0.87
LITAF-201ENST00000339430 GSE1Q14687 1217 aa20.5■□□□□ 0.87
LITAF-201ENST00000339430 TOM1O60784 492 aa20.5■□□□□ 0.87
LITAF-201ENST00000339430 PIP4K2BP78356 416 aa20.5■□□□□ 0.87
LITAF-201ENST00000339430 TBC1D2Q9BYX2 928 aa20.5■□□□□ 0.87
LITAF-201ENST00000339430 KDRP35968 1356 aa20.49■□□□□ 0.87
LITAF-201ENST00000339430 CHD1LQ86WJ1 897 aa20.49■□□□□ 0.87
LITAF-201ENST00000339430 USHBP1Q8N6Y0 703 aa20.49■□□□□ 0.87
LITAF-201ENST00000339430 ARHGAP45Q92619 1136 aa20.49■□□□□ 0.87
LITAF-201ENST00000339430 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
LITAF-201ENST00000339430 HAP1P54257 671 aaPredicted RBP20.48■□□□□ 0.87
LITAF-201ENST00000339430 CHRNA2Q15822 529 aa20.48■□□□□ 0.87
LITAF-201ENST00000339430 NBPF6Q5VWK0 638 aa20.48■□□□□ 0.87
LITAF-201ENST00000339430 SPRYD3Q8NCJ5 442 aa20.48■□□□□ 0.87
LITAF-201ENST00000339430 LRRC59Q96AG4 307 aaKnown RBP20.48■□□□□ 0.87
LITAF-201ENST00000339430 NBPF4Q96M43 638 aa20.48■□□□□ 0.87
LITAF-201ENST00000339430 KIAA0232Q92628 1395 aa20.48■□□□□ 0.87
LITAF-201ENST00000339430 ANKRD24Q8TF21 1146 aa20.48■□□□□ 0.87
LITAF-201ENST00000339430 KRT24Q2M2I5 525 aa20.47■□□□□ 0.87
LITAF-201ENST00000339430 ANKRD45Q5TZF3 282 aa20.47■□□□□ 0.87
LITAF-201ENST00000339430 AHDC1Q5TGY3 1603 aaPredicted RBP20.47■□□□□ 0.87
LITAF-201ENST00000339430 RGPD5Q99666 1765 aa20.46■□□□□ 0.87
LITAF-201ENST00000339430 MCM10Q7L590 875 aa20.46■□□□□ 0.87
LITAF-201ENST00000339430 ABCC4O15439 1325 aa20.46■□□□□ 0.87
LITAF-201ENST00000339430 UBAP1LF5GYI3 381 aa20.45■□□□□ 0.86
LITAF-201ENST00000339430 CPDO75976 1380 aa20.45■□□□□ 0.86
LITAF-201ENST00000339430 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
LITAF-201ENST00000339430 SIRT2Q8IXJ6 389 aa20.44■□□□□ 0.86
LITAF-201ENST00000339430 PRDM11Q9NQV5 511 aa20.43■□□□□ 0.86
LITAF-201ENST00000339430 ERBB3P21860 1342 aa20.43■□□□□ 0.86
LITAF-201ENST00000339430 COL18A1P39060 1754 aa20.43■□□□□ 0.86
LITAF-201ENST00000339430 ABCA3Q99758 1704 aa20.43■□□□□ 0.86
LITAF-201ENST00000339430 CHMP4BQ9H444 224 aaKnown RBP20.43■□□□□ 0.86
LITAF-201ENST00000339430 ANTXR1Q9H6X2 564 aa20.43■□□□□ 0.86
LITAF-201ENST00000339430 API5Q9BZZ5 524 aaKnown RBP20.42■□□□□ 0.86
LITAF-201ENST00000339430 MTHFSDQ2M296 383 aaKnown RBP20.41■□□□□ 0.86
LITAF-201ENST00000339430 GCC1Q96CN9 775 aa20.41■□□□□ 0.86
LITAF-201ENST00000339430 PHLPP1O60346 1717 aa20.4■□□□□ 0.86
LITAF-201ENST00000339430 CSB-PGBD3P0DP91 1061 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms