RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CALD1Q05682 793 aaKnown RBP9.46□□□□□ -0.89
SRFBP1-201ENST00000339397 ARHGEF25Q86VW2 580 aa9.46□□□□□ -0.89
SRFBP1-201ENST00000339397 ZNF335Q9H4Z2 1342 aaPredicted RBP9.46□□□□□ -0.89
SRFBP1-201ENST00000339397 NWD1Q149M9 1564 aa9.46□□□□□ -0.9
SRFBP1-201ENST00000339397 ALDH1L2Q3SY69 923 aa9.46□□□□□ -0.9
SRFBP1-201ENST00000339397 CRB1P82279 1406 aa9.46□□□□□ -0.9
SRFBP1-201ENST00000339397 RTF1Q92541 710 aaKnown RBP9.45□□□□□ -0.9
SRFBP1-201ENST00000339397 NECTIN2Q92692 538 aa9.45□□□□□ -0.9
SRFBP1-201ENST00000339397 BACH2Q9BYV9 841 aa9.45□□□□□ -0.9
SRFBP1-201ENST00000339397 C1orf115Q9H7X2 142 aa9.45□□□□□ -0.9
SRFBP1-201ENST00000339397 LGR6Q9HBX8 967 aa9.45□□□□□ -0.9
SRFBP1-201ENST00000339397 NFAT5O94916 1531 aa9.45□□□□□ -0.9
SRFBP1-201ENST00000339397 NPM2Q86SE8 214 aaKnown RBP9.45□□□□□ -0.9
SRFBP1-201ENST00000339397 TSPYL4Q9UJ04 414 aa9.45□□□□□ -0.9
SRFBP1-201ENST00000339397 MST1RQ04912 1400 aa9.44□□□□□ -0.9
SRFBP1-201ENST00000339397 KCNH5Q8NCM2 988 aa9.44□□□□□ -0.9
SRFBP1-201ENST00000339397 CHRNA2Q15822 529 aa9.44□□□□□ -0.9
SRFBP1-201ENST00000339397 ZBTB40Q9NUA8 1239 aa9.44□□□□□ -0.9
SRFBP1-201ENST00000339397 KIF16BQ96L93 1317 aa9.44□□□□□ -0.9
SRFBP1-201ENST00000339397 GNAT3A8MTJ3 354 aa9.43□□□□□ -0.9
SRFBP1-201ENST00000339397 IPO8O15397 1037 aaKnown RBP9.43□□□□□ -0.9
SRFBP1-201ENST00000339397 LMTK3Q96Q04 1460 aa9.43□□□□□ -0.9
SRFBP1-201ENST00000339397 MSH6P52701 1360 aa9.43□□□□□ -0.9
SRFBP1-201ENST00000339397 LTN1O94822 1766 aa9.43□□□□□ -0.9
SRFBP1-201ENST00000339397 G2E3Q7L622 706 aa9.43□□□□□ -0.9
SRFBP1-201ENST00000339397 GAS2L2Q8NHY3 880 aa9.43□□□□□ -0.9
SRFBP1-201ENST00000339397 ANKRD24Q8TF21 1146 aa9.43□□□□□ -0.9
SRFBP1-201ENST00000339397 ZBTB7BO15156 539 aaPredicted RBP9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 BRPF1P55201 1214 aaPredicted RBP9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 MPRIPQ6WCQ1 1025 aa9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 CADPS2Q86UW7 1296 aa9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 DDX19BQ9UMR2 479 aa9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 RGPD2P0DJD1 1756 aa9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 KCNQ3O43525 872 aa9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 SLC4A2P04920 1241 aa9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 MS4A1P11836 297 aa9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 BRINP3Q76B58 766 aa9.42□□□□□ -0.9
SRFBP1-201ENST00000339397 USP19O94966 1318 aa9.41□□□□□ -0.9
SRFBP1-201ENST00000339397 KIF24Q5T7B8 1368 aa9.41□□□□□ -0.9
SRFBP1-201ENST00000339397 C8orf34Q49A92 452 aa9.41□□□□□ -0.9
SRFBP1-201ENST00000339397 F6X3S4 739 aa9.41□□□□□ -0.9
SRFBP1-201ENST00000339397 ZNF428Q96B54 188 aa9.41□□□□□ -0.9
SRFBP1-201ENST00000339397 BCL11AQ9H165 835 aa9.4□□□□□ -0.9
SRFBP1-201ENST00000339397 STRCQ7RTU9 1775 aa9.4□□□□□ -0.91
SRFBP1-201ENST00000339397 SIRT2Q8IXJ6 389 aa9.4□□□□□ -0.91
SRFBP1-201ENST00000339397 RWDD1Q9H446 243 aaPredicted RBP9.4□□□□□ -0.91
SRFBP1-201ENST00000339397 RTL1A6NKG5 1358 aa9.4□□□□□ -0.91
SRFBP1-201ENST00000339397 ARHGAP45Q92619 1136 aa9.39□□□□□ -0.91
SRFBP1-201ENST00000339397 MAP3K5Q99683 1374 aa9.39□□□□□ -0.91
SRFBP1-201ENST00000339397 MED1Q15648 1581 aaPredicted RBP9.39□□□□□ -0.91
SRFBP1-201ENST00000339397 USP54Q70EL1 1684 aa9.39□□□□□ -0.91
SRFBP1-201ENST00000339397 TRPM3Q9HCF6 1732 aaPredicted RBP9.39□□□□□ -0.91
SRFBP1-201ENST00000339397 SEC24BO95487 1268 aa9.39□□□□□ -0.91
SRFBP1-201ENST00000339397 TAF7Q15545 349 aaPredicted RBP9.39□□□□□ -0.91
SRFBP1-201ENST00000339397 ZNF530Q6P9A1 599 aaPredicted RBP9.39□□□□□ -0.91
SRFBP1-201ENST00000339397 SLAIN2Q9P270 581 aa9.39□□□□□ -0.91
SRFBP1-201ENST00000339397 ABCC4O15439 1325 aa9.39□□□□□ -0.91
SRFBP1-201ENST00000339397 NLRP2Q9NX02 1062 aa9.38□□□□□ -0.91
SRFBP1-201ENST00000339397 ERBB3P21860 1342 aa9.38□□□□□ -0.91
SRFBP1-201ENST00000339397 NPHP3Q7Z494 1330 aa9.38□□□□□ -0.91
SRFBP1-201ENST00000339397 KIAA0232Q92628 1395 aa9.38□□□□□ -0.91
SRFBP1-201ENST00000339397 SLC4A10Q6U841 1118 aa9.38□□□□□ -0.91
SRFBP1-201ENST00000339397 SLIT3O75094 1523 aa9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 PXDNQ92626 1479 aa9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 RGS12O14924 1447 aa9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 RGPD5Q99666 1765 aa9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 SPATA31A3Q5VYP0 1347 aa9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 TAOK2Q9UL54 1235 aa9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 PRAMEF22A3QJZ6 481 aa9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 ANXA1P04083 346 aa9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 EIF2S2P20042 333 aaKnown RBP9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 HDAC1Q13547 482 aaPredicted RBP9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 AAMPQ13685 434 aa9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 XIRP1Q702N8 1843 aaKnown RBP9.37□□□□□ -0.91
SRFBP1-201ENST00000339397 FAM161AQ3B820 660 aa9.36□□□□□ -0.91
SRFBP1-201ENST00000339397 MEIS3Q99687 375 aa9.36□□□□□ -0.91
SRFBP1-201ENST00000339397 API5Q9BZZ5 524 aaKnown RBP9.36□□□□□ -0.91
SRFBP1-201ENST00000339397 LNPKQ9C0E8 428 aa9.36□□□□□ -0.91
SRFBP1-201ENST00000339397 PHAXQ9H814 394 aaKnown RBP9.36□□□□□ -0.91
SRFBP1-201ENST00000339397 CEMIPQ8WUJ3 1361 aa9.36□□□□□ -0.91
SRFBP1-201ENST00000339397 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
SRFBP1-201ENST00000339397 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
SRFBP1-201ENST00000339397 DCCP43146 1447 aa9.35□□□□□ -0.91
SRFBP1-201ENST00000339397 AKAP4Q5JQC9 854 aa9.35□□□□□ -0.91
SRFBP1-201ENST00000339397 SMC5Q8IY18 1101 aa9.35□□□□□ -0.91
SRFBP1-201ENST00000339397 ALS2Q96Q42 1657 aa9.35□□□□□ -0.91
SRFBP1-201ENST00000339397 BTBD11A6QL63 1104 aa9.34□□□□□ -0.91
SRFBP1-201ENST00000339397 TULP1O00294 542 aaPredicted RBP9.34□□□□□ -0.91
SRFBP1-201ENST00000339397 RNMTO43148 476 aaKnown RBP9.34□□□□□ -0.91
SRFBP1-201ENST00000339397 ANP32AP39687 249 aaKnown RBP9.34□□□□□ -0.91
SRFBP1-201ENST00000339397 EIF4A1P60842 406 aaKnown RBP9.34□□□□□ -0.91
SRFBP1-201ENST00000339397 INTS3Q68E01 1043 aaKnown RBP9.34□□□□□ -0.91
SRFBP1-201ENST00000339397 TNS3Q68CZ2 1445 aa9.34□□□□□ -0.91
SRFBP1-201ENST00000339397 NCOA3Q9Y6Q9 1424 aa9.34□□□□□ -0.91
SRFBP1-201ENST00000339397 TEFQ10587 303 aa9.34□□□□□ -0.91
SRFBP1-201ENST00000339397 SLC39A6Q13433 755 aa9.34□□□□□ -0.91
SRFBP1-201ENST00000339397 FLIIQ13045 1269 aa9.34□□□□□ -0.92
SRFBP1-201ENST00000339397 C1orf141Q5JVX7 400 aa9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms